Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:39:12 (3068349): wrapper (7.7.26015): starting
15:39:12 (3068349): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 15:39:12] Arguments: --nthreads 12
[2025-06-03 15:39:12] Threads: 12
[2025-06-03 15:39:12] Checking for CVMFS
[2025-06-03 15:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:39:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:39:13] 2.11.5.0 2109152 22770 310252 146760 3 237 27296837 45568000 12737 130560 0 264264289 99.846 126927865 26991 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 15:39:13] CVMFS is ok
[2025-06-03 15:39:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:39:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:39:13] Further information can be found at the LHC@home message board.
[2025-06-03 15:39:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:39:13] Checking for apptainer binary...
[2025-06-03 15:39:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:39:13] Running /usr/bin/apptainer --version
[2025-06-03 15:39:13] apptainer version 1.4.0-1.el9
[2025-06-03 15:39:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:39:13] wns0078.triumf.lcg
[2025-06-03 15:39:13] apptainer works
[2025-06-03 15:39:13] Set ATHENA_PROC_NUMBER=12
[2025-06-03 15:39:13] Set ATHENA_CORE_NUMBER=12
[2025-06-03 15:39:13] Starting ATLAS job with PandaID=6678071037
[2025-06-03 15:39:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:45:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | WARNING  | wrong length of table data, x=[1748990492.0], y=[12131.0] (must be same and length>=4)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | could have reported an average CPU frequency of 2505 MHz (4 samples)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | ..............................
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . Timing measurements:
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . get job = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . initial setup = 4 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . payload setup = 22 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . stage-in = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . payload execution = 68 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . stage-out = 1 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . log creation = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | ..............................
[2025-06-03 15:45:13] 2025-06-03 22:44:39,193 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:45:13] 2025-06-03 22:44:39,193 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071037/pilotlog.txt
[2025-06-03 15:45:13] 2025-06-03 22:44:39,251 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 15:45:13] - Log from pilotlog.txt -
[2025-06-03 15:45:13] 2025-06-03 22:44:39,181 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678071037/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | INFO     | extracted standard info from prmon json
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | WARNING  | wrong length of table data, x=[1748990492.0], y=[12131.0] (must be same and length>=4)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | could have reported an average CPU frequency of 2505 MHz (4 samples)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | ..............................
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . Timing measurements:
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . get job = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . initial setup = 4 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . payload setup = 22 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . stage-in = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . payload execution = 68 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . stage-out = 1 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . log creation = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | ..............................
[2025-06-03 15:45:13] 2025-06-03 22:44:39,193 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:45:13] 2025-06-03 22:44:39,193 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071037/pilotlog.txt
[2025-06-03 15:45:13] 2025-06-03 22:44:39,251 | WARNING  | 
[2025-06-03 15:45:13] [begin log extracts]
[2025-06-03 15:45:13] - Log from pilotlog.txt -
[2025-06-03 15:45:13] 2025-06-03 22:44:39,181 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678071037/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | INFO     | extracted standard info from prmon json
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:45:13] 2025-06-03 22:44:39,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | WARNING  | wrong length of table data, x=[1748990492.0], y=[12131.0] (must be same and length>=4)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | could have reported an average CPU frequency of 2505 MHz (4 samples)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | ..............................
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . Timing measurements:
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . get job = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . initial setup = 4 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . payload setup = 22 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . stage-in = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . payload execution = 68 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . stage-out = 1 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | . log creation = 0 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,192 | INFO     | ..............................
[2025-06-03 15:45:13] 2025-06-03 22:44:39,193 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:45:13] 2025-06-03 22:44:39,193 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071037/pilotlog.txt
[2025-06-03 15:45:13] [end log extracts]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,251 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,252 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 15:45:13] 2025-06-03 22:44:39,635 | INFO     | 
[2025-06-03 15:45:13] 2025-06-03 22:44:39,635 | INFO     | job summary report
[2025-06-03 15:45:13] 2025-06-03 22:44:39,635 | INFO     | --------------------------------------------------
[2025-06-03 15:45:13] 2025-06-03 22:44:39,635 | INFO     | PanDA job id: 6678071037
[2025-06-03 15:45:13] 2025-06-03 22:44:39,635 | INFO     | task id: 45006595
[2025-06-03 15:45:13] 2025-06-03 22:44:39,635 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 15:42:01,570 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | pilot state: failed 
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | transexitcode: 65
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | exeerrorcode: 65
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | exitcode: 65
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | cpuconsumptiontime: 18 s
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | nevents: 0
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | neventsw: 0
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | pid: 3082504
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | pgrp: 3082504
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | corecount: 12
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | event service: False
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | sizes: {0: 2405293, 1: 2405377, 2: 2405548, 3: 2405576, 13: 2405604, 18: 2405922, 24: 2406078, 95: 2429250, 97: 2433485, 98: 2433513, 242: 2433679}
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | --------------------------------------------------
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | 
[2025-06-03 15:45:13] 2025-06-03 22:44:39,636 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 15:45:13] 2025-06-03 22:44:39,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,848 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,848 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | job 6678071037 has completed (purged errors)
[2025-06-03 15:45:13] 2025-06-03 22:44:39,849 | INFO     | overall cleanup function is called
[2025-06-03 15:45:13] 2025-06-03 22:44:40,856 | INFO     | --- collectZombieJob: --- 10, [3082504]
[2025-06-03 15:45:13] 2025-06-03 22:44:40,856 | INFO     | zombie collector waiting for pid 3082504
[2025-06-03 15:45:13] 2025-06-03 22:44:40,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:45:13] 2025-06-03 22:44:40,856 | INFO     | collected zombie processes
[2025-06-03 15:45:13] 2025-06-03 22:44:40,857 | INFO     | will attempt to kill all subprocesses of pid=3082504
[2025-06-03 15:45:13] 2025-06-03 22:44:41,193 | INFO     | process IDs to be killed: [3082504] (in reverse order)
[2025-06-03 15:45:13] 2025-06-03 22:44:41,280 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:45:13] 2025-06-03 22:44:41,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:45:13] 2025-06-03 22:44:41,371 | INFO     | did not find any defunct processes belonging to 3082504
[2025-06-03 15:45:13] 2025-06-03 22:44:41,421 | INFO     | did not find any defunct processes belonging to 3082504
[2025-06-03 15:45:13] 2025-06-03 22:44:41,421 | INFO     | ready for new job
[2025-06-03 15:45:13] 2025-06-03 22:44:41,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:45:13] 2025-06-03 22:44:41,443 | INFO     | ***************************************
[2025-06-03 15:45:13] 2025-06-03 22:44:41,443 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 15:45:13] 2025-06-03 22:44:41,443 | INFO     | ***************************************
[2025-06-03 15:45:13] 2025-06-03 22:44:41,443 | INFO     | 
[2025-06-03 15:45:13] 2025-06-03 22:44:41,445 | INFO     | architecture information:
[2025-06-03 15:45:13] 2025-06-03 22:44:41,476 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:45:13] 2025-06-03 22:44:41,568 | INFO     | cat /etc/os-release:
[2025-06-03 15:45:13] NAME="CentOS Linux"
[2025-06-03 15:45:13] VERSION="7 (Core)"
[2025-06-03 15:45:13] ID="centos"
[2025-06-03 15:45:13] ID_LIKE="rhel fedora"
[2025-06-03 15:45:13] VERSION_ID="7"
[2025-06-03 15:45:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:45:13] ANSI_COLOR="0;31"
[2025-06-03 15:45:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:45:13] HOME_URL="https://www.centos.org/"
[2025-06-03 15:45:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:45:13] 
[2025-06-03 15:45:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:45:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:45:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:45:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:45:13] 
[2025-06-03 15:45:13] 2025-06-03 22:44:41,568 | INFO     | ***************************************
[2025-06-03 15:45:13] 2025-06-03 22:44:42,074 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 15:45:13] 2025-06-03 22:44:42,190 | INFO     | sufficient remaining disk space (1782905307136 B)
[2025-06-03 15:45:13] 2025-06-03 22:44:42,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:45:13] 2025-06-03 22:44:42,191 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:45:13] 2025-06-03 22:44:42,191 | INFO     | update_server=False
[2025-06-03 15:45:13] 2025-06-03 22:44:42,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:45:13] 2025-06-03 22:44:42,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 15:45:13] 2025-06-03 22:44:42,524 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 15:45:13] 2025-06-03 22:44:42,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:45:13] 2025-06-03 22:44:42,524 | INFO     | will abort loop
[2025-06-03 15:45:13] 2025-06-03 22:44:42,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:45:13] 2025-06-03 22:44:42,804 | INFO     | all data control threads have been joined
[2025-06-03 15:45:13] 2025-06-03 22:44:43,125 | INFO     | all payload control threads have been joined
[2025-06-03 15:45:13] 2025-06-03 22:44:43,198 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,530 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,680 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,754 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,755 | INFO     | [job] validate thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,776 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,810 | INFO     | [data] control thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:43,903 | INFO     | all job control threads have been joined
[2025-06-03 15:45:13] 2025-06-03 22:44:43,958 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:44,131 | INFO     | [payload] control thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:44,331 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:44,334 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:44,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:45:13] 2025-06-03 22:44:44,568 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:44,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:44,909 | INFO     | [job] control thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:45,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:45:13] 2025-06-03 22:44:45,474 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:49,082 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:45:13] 2025-06-03 22:44:49,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886337697600)>', '<ExcThread(monitor, started 139885667149568)>']
[2025-06-03 15:45:13] 2025-06-03 22:44:54,236 | INFO     | all workflow threads have been joined
[2025-06-03 15:45:13] 2025-06-03 22:44:54,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:45:13] 2025-06-03 22:44:54,237 | INFO     | traces error code: 0
[2025-06-03 15:45:13] 2025-06-03 22:44:54,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:45:13] 2025-06-03 22:45:12,794 | INFO     | PID=3071920 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 15:45:13] 2025-06-03 22:45:12,796 | INFO     | .. there are 21 such processes running
[2025-06-03 15:45:13] 2025-06-03 22:45:12,796 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:45:13] 2025-06-03 22:45:12,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:45:13] 2025-06-03 22:45:12,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:45:13] 2025-06-03 22:45:12,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:45:13] 2025-06-03 22:45:12,797 | INFO     | [monitor] control thread has ended
[2025-06-03 15:45:13] 2025-06-03 22:45:12,952 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:45:13] 2025-06-03 22:45:12,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:45:13] 2025-06-03 22:45:12,957 [wrapper] pilotpid: 3071920
[2025-06-03 15:45:13] 2025-06-03 22:45:12,959 [wrapper] Pilot exit status: 0
[2025-06-03 15:45:13] 2025-06-03 22:45:12,969 [wrapper] pandaids: 6678071037
[2025-06-03 15:45:13] 2025-06-03 22:45:13,012 [wrapper] cleanup supervisor_pilot 3071926 3071921
[2025-06-03 15:45:13] 2025-06-03 22:45:13,014 [wrapper] Test setup, not cleaning
[2025-06-03 15:45:13] 2025-06-03 22:45:13,016 [wrapper] apfmon messages muted
[2025-06-03 15:45:13] 2025-06-03 22:45:13,018 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:45:13] 2025-06-03 22:45:13,020 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:45:13]  *** Error codes and diagnostics ***
[2025-06-03 15:45:13]     "exeErrorCode": 65,
[2025-06-03 15:45:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:45:13]     "pilotErrorCode": 1305,
[2025-06-03 15:45:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:45:13]  *** Listing of results directory ***
[2025-06-03 15:45:13] total 212872
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:35 queuedata.json
[2025-06-03 15:45:13] -rwx------. 1 boinc boinc     37140 Jun  3 13:36 runpilot2-wrapper.sh
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:45:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:39 run_atlas
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:39 job.xml
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc      6601 Jun  3 15:39 init_data.xml
[2025-06-03 15:45:13] -rw-r--r--. 2 boinc boinc 213823459 Jun  3 15:39 EVNT.45006593._001802.pool.root.1
[2025-06-03 15:45:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:39 start_atlas.sh
[2025-06-03 15:45:13] drwxrwx--x. 2 boinc boinc      4096 Jun  3 15:39 shared
[2025-06-03 15:45:13] -rw-r--r--. 2 boinc boinc    564114 Jun  3 15:39 input.tar.gz
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:39 boinc_lockfile
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:39 pandaJob.out
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc    986861 Jun  3 15:39 agis_schedconf.cvmfs.json
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc   1603667 Jun  3 15:39 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:45:13] drwx------. 6 boinc boinc      4096 Jun  3 15:39 pilot3
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc       523 Jun  3 15:41 boinc_task_state.xml
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc       963 Jun  3 15:42 memory_monitor_summary.json
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc     21312 Jun  3 15:42 log.45006595._044912.job.log.tgz.1
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc      8335 Jun  3 15:44 heartbeat.json
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:45 boinc_mmap_file
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc        22 Jun  3 15:45 wrapper_checkpoint.txt
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc       823 Jun  3 15:45 pilotlog.txt
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc        95 Jun  3 15:45 pilot_heartbeat.json
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc     87073 Jun  3 15:45 log.45006595._044912.job.log.1
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc       188 Jun  3 15:45 output.list
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:45 runtime_log
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc    133120 Jun  3 15:45 result.tar.gz
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc      8484 Jun  3 15:45 runtime_log.err
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc       644 Jun  3 15:45 nrpLDmyXng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZtZKDmNfdvPm.diag
[2025-06-03 15:45:13] -rw-r--r--. 1 boinc boinc     21870 Jun  3 15:45 stderr.txt
[2025-06-03 15:45:13] No HITS result produced
[2025-06-03 15:45:13]  *** Contents of shared directory: ***
[2025-06-03 15:45:13] total 209512
[2025-06-03 15:45:13] -rw-r--r--. 2 boinc boinc 213823459 Jun  3 15:39 ATLAS.root_0
[2025-06-03 15:45:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:39 start_atlas.sh
[2025-06-03 15:45:13] -rw-r--r--. 2 boinc boinc    564114 Jun  3 15:39 input.tar.gz
[2025-06-03 15:45:13] -rw-------. 1 boinc boinc    133120 Jun  3 15:45 result.tar.gz
15:45:14 (3068349): run_atlas exited; CPU time 29.694679
15:45:14 (3068349): called boinc_finish(0)

</stderr_txt>
]]>

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