Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:28 (2745151): wrapper (7.7.26015): starting
15:44:28 (2745151): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 15:44:28] Arguments: --nthreads 12
[2025-06-03 15:44:28] Threads: 12
[2025-06-03 15:44:28] Checking for CVMFS
[2025-06-03 15:44:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:44:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:44:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:44:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:44:29] 2.11.5.0 2067951 22831 231904 146760 2 453 37409290 45568000 11094 130560 0 230038815 99.813 130286132 31106 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 15:44:29] CVMFS is ok
[2025-06-03 15:44:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:44:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:44:29] Further information can be found at the LHC@home message board.
[2025-06-03 15:44:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:44:29] Checking for apptainer binary...
[2025-06-03 15:44:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:44:29] Running /usr/bin/apptainer --version
[2025-06-03 15:44:29] apptainer version 1.4.0-1.el9
[2025-06-03 15:44:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:44:29] wns0042.triumf.lcg
[2025-06-03 15:44:29] apptainer works
[2025-06-03 15:44:29] Set ATHENA_PROC_NUMBER=12
[2025-06-03 15:44:29] Set ATHENA_CORE_NUMBER=12
[2025-06-03 15:44:29] Starting ATLAS job with PandaID=6678071017
[2025-06-03 15:44:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:48:37]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678071017/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | extracted standard info from prmon json
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | WARNING  | wrong length of table data, x=[1748990745.0], y=[1056.0] (must be same and length>=4)
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | ..............................
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . Timing measurements:
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . get job = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . initial setup = 3 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . payload setup = 8 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . stage-in = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . payload execution = 28 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . stage-out = 1 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . log creation = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | ..............................
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071017/pilotlog.txt
[2025-06-03 15:48:37] 2025-06-03 22:48:26,053 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 15:48:37] - Log from pilotlog.txt -
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678071017/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | extracted standard info from prmon json
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | WARNING  | wrong length of table data, x=[1748990745.0], y=[1056.0] (must be same and length>=4)
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | ..............................
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . Timing measurements:
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . get job = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . initial setup = 3 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . payload setup = 8 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . stage-in = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . payload execution = 28 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . stage-out = 1 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . log creation = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | ..............................
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071017/pilotlog.txt
[2025-06-03 15:48:37] 2025-06-03 22:48:26,053 | WARNING  | 
[2025-06-03 15:48:37] [begin log extracts]
[2025-06-03 15:48:37] - Log from pilotlog.txt -
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678071017/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:48:37] 2025-06-03 22:48:25,963 | INFO     | extracted standard info from prmon json
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:48:37] 2025-06-03 22:48:25,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | WARNING  | wrong length of table data, x=[1748990745.0], y=[1056.0] (must be same and length>=4)
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | ..............................
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . Timing measurements:
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . get job = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . initial setup = 3 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . payload setup = 8 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . stage-in = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . payload execution = 28 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . stage-out = 1 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | . log creation = 0 s
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | ..............................
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:48:37] 2025-06-03 22:48:25,965 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071017/pilotlog.txt
[2025-06-03 15:48:37] [end log extracts]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,054 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 15:48:37] 2025-06-03 22:48:26,055 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 15:48:37] 2025-06-03 22:48:26,121 | INFO     | 
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | job summary report
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | --------------------------------------------------
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | PanDA job id: 6678071017
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | task id: 45006595
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 15:45:58,940 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | pilot state: failed 
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | transexitcode: 65
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | exeerrorcode: 65
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | exitcode: 65
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | cpuconsumptiontime: 16 s
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | nevents: 0
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | neventsw: 0
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | pid: 2755063
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | pgrp: 2755063
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | corecount: 12
[2025-06-03 15:48:37] 2025-06-03 22:48:26,122 | INFO     | event service: False
[2025-06-03 15:48:37] 2025-06-03 22:48:26,123 | INFO     | sizes: {0: 2405010, 1: 2405209, 12: 2405209, 14: 2405443, 22: 2405471, 40: 2428764, 41: 2428868, 42: 2433131, 43: 2433187, 179: 2433389}
[2025-06-03 15:48:37] 2025-06-03 22:48:26,123 | INFO     | --------------------------------------------------
[2025-06-03 15:48:37] 2025-06-03 22:48:26,123 | INFO     | 
[2025-06-03 15:48:37] 2025-06-03 22:48:26,123 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 15:48:37] 2025-06-03 22:48:26,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | job 6678071017 has completed (purged errors)
[2025-06-03 15:48:37] 2025-06-03 22:48:26,139 | INFO     | overall cleanup function is called
[2025-06-03 15:48:37] 2025-06-03 22:48:27,145 | INFO     | --- collectZombieJob: --- 10, [2755063]
[2025-06-03 15:48:37] 2025-06-03 22:48:27,145 | INFO     | zombie collector waiting for pid 2755063
[2025-06-03 15:48:37] 2025-06-03 22:48:27,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:48:37] 2025-06-03 22:48:27,145 | INFO     | collected zombie processes
[2025-06-03 15:48:37] 2025-06-03 22:48:27,145 | INFO     | will attempt to kill all subprocesses of pid=2755063
[2025-06-03 15:48:37] 2025-06-03 22:48:27,309 | INFO     | process IDs to be killed: [2755063] (in reverse order)
[2025-06-03 15:48:37] 2025-06-03 22:48:27,385 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:48:37] 2025-06-03 22:48:27,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:48:37] 2025-06-03 22:48:27,393 | INFO     | did not find any defunct processes belonging to 2755063
[2025-06-03 15:48:37] 2025-06-03 22:48:27,400 | INFO     | did not find any defunct processes belonging to 2755063
[2025-06-03 15:48:37] 2025-06-03 22:48:27,401 | INFO     | ready for new job
[2025-06-03 15:48:37] 2025-06-03 22:48:27,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:48:37] 2025-06-03 22:48:27,403 | INFO     | **************************************
[2025-06-03 15:48:37] 2025-06-03 22:48:27,403 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:48:37] 2025-06-03 22:48:27,403 | INFO     | **************************************
[2025-06-03 15:48:37] 2025-06-03 22:48:27,403 | INFO     | 
[2025-06-03 15:48:37] 2025-06-03 22:48:27,405 | INFO     | architecture information:
[2025-06-03 15:48:37] 2025-06-03 22:48:27,405 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:48:37] 2025-06-03 22:48:27,444 | INFO     | cat /etc/os-release:
[2025-06-03 15:48:37] NAME="CentOS Linux"
[2025-06-03 15:48:37] VERSION="7 (Core)"
[2025-06-03 15:48:37] ID="centos"
[2025-06-03 15:48:37] ID_LIKE="rhel fedora"
[2025-06-03 15:48:37] VERSION_ID="7"
[2025-06-03 15:48:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:48:37] ANSI_COLOR="0;31"
[2025-06-03 15:48:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:48:37] HOME_URL="https://www.centos.org/"
[2025-06-03 15:48:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:48:37] 
[2025-06-03 15:48:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:48:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:48:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:48:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:48:37] 
[2025-06-03 15:48:37] 2025-06-03 22:48:27,444 | INFO     | **************************************
[2025-06-03 15:48:37] 2025-06-03 22:48:27,947 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 15:48:37] 2025-06-03 22:48:27,959 | INFO     | sufficient remaining disk space (2135811948544 B)
[2025-06-03 15:48:37] 2025-06-03 22:48:27,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:48:37] 2025-06-03 22:48:27,960 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:48:37] 2025-06-03 22:48:27,960 | INFO     | update_server=False
[2025-06-03 15:48:37] 2025-06-03 22:48:27,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:48:37] 2025-06-03 22:48:27,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:48:37] 2025-06-03 22:48:27,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:48:37] 2025-06-03 22:48:28,017 | INFO     | all payload control threads have been joined
[2025-06-03 15:48:37] 2025-06-03 22:48:28,039 | INFO     | all data control threads have been joined
[2025-06-03 15:48:37] 2025-06-03 22:48:28,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:48:37] 2025-06-03 22:48:28,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:48:37] 2025-06-03 22:48:28,389 | INFO     | aborting loop
[2025-06-03 15:48:37] 2025-06-03 22:48:28,439 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:48:37] 2025-06-03 22:48:28,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:48:37] 2025-06-03 22:48:28,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:48:37] 2025-06-03 22:48:28,966 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:28,967 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:29,023 | INFO     | [payload] control thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:29,045 | INFO     | [data] control thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:29,146 | INFO     | all job control threads have been joined
[2025-06-03 15:48:37] 2025-06-03 22:48:29,396 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:29,533 | INFO     | [job] validate thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:29,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:29,970 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,006 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,044 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,152 | INFO     | [job] control thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,156 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,252 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,333 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:30,379 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:31,979 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:48:37] 2025-06-03 22:48:32,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123424102208)>', '<ExcThread(monitor, started 140122293004032)>']
[2025-06-03 15:48:37] 2025-06-03 22:48:32,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:48:37] 2025-06-03 22:48:32,459 | INFO     | [monitor] control thread has ended
[2025-06-03 15:48:37] 2025-06-03 22:48:37,077 | INFO     | all workflow threads have been joined
[2025-06-03 15:48:37] 2025-06-03 22:48:37,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:48:37] 2025-06-03 22:48:37,077 | INFO     | traces error code: 0
[2025-06-03 15:48:37] 2025-06-03 22:48:37,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:48:37] 2025-06-03 22:48:37,276 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:48:37] 2025-06-03 22:48:37,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:48:37] 2025-06-03 22:48:37,280 [wrapper] pilotpid: 2748705
[2025-06-03 15:48:37] 2025-06-03 22:48:37,282 [wrapper] Pilot exit status: 0
[2025-06-03 15:48:37] 2025-06-03 22:48:37,318 [wrapper] pandaids: 6678071017
[2025-06-03 15:48:37] 2025-06-03 22:48:37,367 [wrapper] cleanup supervisor_pilot 2748711 2748706
[2025-06-03 15:48:37] 2025-06-03 22:48:37,371 [wrapper] Test setup, not cleaning
[2025-06-03 15:48:37] 2025-06-03 22:48:37,374 [wrapper] apfmon messages muted
[2025-06-03 15:48:37] 2025-06-03 22:48:37,376 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:48:37] 2025-06-03 22:48:37,378 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:48:37]  *** Error codes and diagnostics ***
[2025-06-03 15:48:37]     "exeErrorCode": 65,
[2025-06-03 15:48:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:48:37]     "pilotErrorCode": 1305,
[2025-06-03 15:48:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:48:37]  *** Listing of results directory ***
[2025-06-03 15:48:37] total 214744
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:09 pilot3.tar.gz
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:33 queuedata.json
[2025-06-03 15:48:37] -rwx------. 1 boinc boinc     37140 Jun  3 13:35 runpilot2-wrapper.sh
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:48:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:44 run_atlas
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:44 job.xml
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc      6601 Jun  3 15:44 init_data.xml
[2025-06-03 15:48:37] -rw-r--r--. 2 boinc boinc 215873295 Jun  3 15:44 EVNT.45006593._001801.pool.root.1
[2025-06-03 15:48:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:44 start_atlas.sh
[2025-06-03 15:48:37] drwxrwx--x. 2 boinc boinc      4096 Jun  3 15:44 shared
[2025-06-03 15:48:37] -rw-r--r--. 2 boinc boinc    508883 Jun  3 15:44 input.tar.gz
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:44 boinc_lockfile
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc      2525 Jun  3 15:44 pandaJob.out
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc    986861 Jun  3 15:44 agis_schedconf.cvmfs.json
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc   1603667 Jun  3 15:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:48:37] drwx------. 4 boinc boinc      4096 Jun  3 15:44 pilot3
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc       522 Jun  3 15:45 boinc_task_state.xml
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc       979 Jun  3 15:46 memory_monitor_summary.json
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc     20576 Jun  3 15:46 log.45006595._044892.job.log.tgz.1
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc        95 Jun  3 15:47 pilot_heartbeat.json
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc      8361 Jun  3 15:48 heartbeat.json
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:48 boinc_mmap_file
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc        22 Jun  3 15:48 wrapper_checkpoint.txt
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc      4352 Jun  3 15:48 pilotlog.txt
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc     76670 Jun  3 15:48 log.45006595._044892.job.log.1
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc       188 Jun  3 15:48 output.list
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:48 runtime_log
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc    112640 Jun  3 15:48 result.tar.gz
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc      8484 Jun  3 15:48 runtime_log.err
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc       645 Jun  3 15:48 2ymKDm0Wng7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8sZKDm3VAVzm.diag
[2025-06-03 15:48:37] -rw-r--r--. 1 boinc boinc     21208 Jun  3 15:48 stderr.txt
[2025-06-03 15:48:37] No HITS result produced
[2025-06-03 15:48:37]  *** Contents of shared directory: ***
[2025-06-03 15:48:37] total 211444
[2025-06-03 15:48:37] -rw-r--r--. 2 boinc boinc 215873295 Jun  3 15:44 ATLAS.root_0
[2025-06-03 15:48:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:44 start_atlas.sh
[2025-06-03 15:48:37] -rw-r--r--. 2 boinc boinc    508883 Jun  3 15:44 input.tar.gz
[2025-06-03 15:48:37] -rw-------. 1 boinc boinc    112640 Jun  3 15:48 result.tar.gz
15:48:39 (2745151): run_atlas exited; CPU time 22.704255
15:48:39 (2745151): called boinc_finish(0)

</stderr_txt>
]]>

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