Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:33:17 (1300598): wrapper (7.7.26015): starting
06:33:17 (1300598): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 06:33:17] Arguments: --nthreads 4
[2025-06-05 06:33:17] Threads: 4
[2025-06-05 06:33:17] Checking for CVMFS
[2025-06-05 06:33:17] No cvmfs_config command found, will try listing directly
[2025-06-05 06:33:17] CVMFS is ok
[2025-06-05 06:33:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:33:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:33:17] Further information can be found at the LHC@home message board.
[2025-06-05 06:33:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:33:17] Checking for apptainer binary...
[2025-06-05 06:33:17] which: no apptainer in ((null))
[2025-06-05 06:33:17] apptainer is not installed, using version from CVMFS
[2025-06-05 06:33:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:33:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-05 06:33:17] apptainer works
[2025-06-05 06:33:18] Set ATHENA_PROC_NUMBER=4
[2025-06-05 06:33:18] Set ATHENA_CORE_NUMBER=4
[2025-06-05 06:33:18] Starting ATLAS job with PandaID=6678071051
[2025-06-05 06:33:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:41:16]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:41:16] 2025-06-05 06:39:40,871 | INFO     | executing command: lscpu
[2025-06-05 08:41:16] 2025-06-05 06:39:40,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:41:16] 2025-06-05 06:39:43,011 | INFO     | monitor loop #529: job 0:6678071051 is in state 'finished'
[2025-06-05 08:41:16] 2025-06-05 06:39:43,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:41:16] 2025-06-05 06:39:45,515 | INFO     | monitor loop #530: job 0:6678071051 is in state 'finished'
[2025-06-05 08:41:16] 2025-06-05 06:39:45,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,456 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:41:16] 2025-06-05 06:39:46,457 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6678071051/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,457 | INFO     | extracted standard info from prmon json
[2025-06-05 08:41:16] 2025-06-05 06:39:46,457 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:41:16] 2025-06-05 06:39:46,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:41:16] 2025-06-05 06:39:46,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:41:16] 2025-06-05 06:39:46,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:41:16] 2025-06-05 06:39:46,460 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:41:16] 2025-06-05 06:39:46,460 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,461 | INFO     | sum of deviations: 10534562201.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,461 | INFO     | mean x: 1749101793.5
[2025-06-05 08:41:16] 2025-06-05 06:39:46,461 | INFO     | mean y: 2308112.0161290322
[2025-06-05 08:41:16] 2025-06-05 06:39:46,461 | INFO     | -- intersect: -31166223547.990677
[2025-06-05 08:41:16] 2025-06-05 06:39:46,461 | INFO     | intersect: -31166223547.990677
[2025-06-05 08:41:16] 2025-06-05 06:39:46,462 | INFO     | chi2: 1.5158463446738457
[2025-06-05 08:41:16] 2025-06-05 06:39:46,462 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,462 | INFO     | sum of deviations: 10183273936.999996
[2025-06-05 08:41:16] 2025-06-05 06:39:46,462 | INFO     | mean x: 1749101641.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,462 | INFO     | mean y: 2307331.512605042
[2025-06-05 08:41:16] 2025-06-05 06:39:46,463 | INFO     | -- intersect: -34086659219.824333
[2025-06-05 08:41:16] 2025-06-05 06:39:46,463 | INFO     | intersect: -34086659219.824333
[2025-06-05 08:41:16] 2025-06-05 06:39:46,463 | INFO     | chi2: 1.5184280409173119
[2025-06-05 08:41:16] 2025-06-05 06:39:46,463 | INFO     | current chi2=1.5184280409173119 (change=-0.1703138482694725 %)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,463 | INFO     | right removable region: 118
[2025-06-05 08:41:16] 2025-06-05 06:39:46,463 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | sum of deviations: -6960531331.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | mean x: 1749101946.0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | mean y: 2346234.7731092437
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | -- intersect: 23303041331.970997
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | intersect: 23303041331.970997
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | chi2: 0.010200335804694335
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | current chi2=0.010200335804694335 (change=99.32708642663324 %)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,464 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | sum of deviations: -5899885626.5
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | mean x: 1749102098.5
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | mean y: 2343664.0263157897
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | -- intersect: 22466969747.780903
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | intersect: 22466969747.780903
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | chi2: 0.009969345688458336
[2025-06-05 08:41:16] 2025-06-05 06:39:46,465 | INFO     | current chi2=0.009969345688458336 (change=2.26453442963803 %)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | left removable region: 20
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | sum of deviations: -3112188524.0000005
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | mean x: 1749102220.5
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | mean y: 2337118.06122449
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | -- intersect: 18656237774.349575
[2025-06-05 08:41:16] 2025-06-05 06:39:46,466 | INFO     | intersect: 18656237774.349575
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | chi2: 0.006313194309247177
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | -- intersect: 18656237774.349575
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | current memory leak: -10.66 B/s (using 98 data points, chi2=0.01)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | ..............................
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | . Timing measurements:
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | . get job = 0 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | . initial setup = 1 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | . payload setup = 9 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,467 | INFO     | . stage-in = 0 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,468 | INFO     | . payload execution = 7537 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,468 | INFO     | . stage-out = 0 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,468 | INFO     | . log creation = 0 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,468 | INFO     | ..............................
[2025-06-05 08:41:16] 2025-06-05 06:39:46,910 | INFO     | 
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | job summary report
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | --------------------------------------------------
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | PanDA job id: 6678071051
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | task id: 45006595
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | errors: (none)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | pilot state: finished 
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | transexitcode: 0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | exeerrorcode: 0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | exeerrordiag: 
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | exitcode: 0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | exitmsg: OK
[2025-06-05 08:41:16] 2025-06-05 06:39:46,911 | INFO     | cpuconsumptiontime: 28955 s
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | nevents: 400
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | neventsw: 0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | pid: 1314637
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | pgrp: 1314637
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | corecount: 4
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | event service: False
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | sizes: {0: 2397182, 1: 2397381, 6: 2397587, 11: 2397615, 7549: 2425189, 7550: 2434152, 7553: 2434336, 7560: 2434506}
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | --------------------------------------------------
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | 
[2025-06-05 08:41:16] 2025-06-05 06:39:46,912 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-05 08:41:16] 2025-06-05 06:39:46,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | job 6678071051 has completed (purged errors)
[2025-06-05 08:41:16] 2025-06-05 06:39:46,941 | INFO     | overall cleanup function is called
[2025-06-05 08:41:16] 2025-06-05 06:39:47,951 | INFO     | --- collectZombieJob: --- 10, [1314637]
[2025-06-05 08:41:16] 2025-06-05 06:39:47,952 | INFO     | zombie collector waiting for pid 1314637
[2025-06-05 08:41:16] 2025-06-05 06:39:47,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:41:16] 2025-06-05 06:39:47,952 | INFO     | collected zombie processes
[2025-06-05 08:41:16] 2025-06-05 06:39:47,952 | INFO     | will attempt to kill all subprocesses of pid=1314637
[2025-06-05 08:41:16] 2025-06-05 06:39:48,610 | INFO     | process IDs to be killed: [1314637] (in reverse order)
[2025-06-05 08:41:16] 2025-06-05 06:39:48,830 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:41:16] 2025-06-05 06:39:48,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:41:16] 2025-06-05 06:39:48,920 | INFO     | did not find any defunct processes belonging to 1314637
[2025-06-05 08:41:16] 2025-06-05 06:39:49,015 | INFO     | did not find any defunct processes belonging to 1314637
[2025-06-05 08:41:16] 2025-06-05 06:39:49,016 | INFO     | ready for new job
[2025-06-05 08:41:16] 2025-06-05 06:39:49,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:41:16] 2025-06-05 06:39:49,018 | INFO     | **************************************
[2025-06-05 08:41:16] 2025-06-05 06:39:49,018 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:41:16] 2025-06-05 06:39:49,018 | INFO     | **************************************
[2025-06-05 08:41:16] 2025-06-05 06:39:49,019 | INFO     | 
[2025-06-05 08:41:16] 2025-06-05 06:39:49,032 | INFO     | architecture information:
[2025-06-05 08:41:16] 2025-06-05 06:39:49,033 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:41:16] 2025-06-05 06:39:49,057 | INFO     | cat /etc/os-release:
[2025-06-05 08:41:16] NAME="CentOS Linux"
[2025-06-05 08:41:16] VERSION="7 (Core)"
[2025-06-05 08:41:16] ID="centos"
[2025-06-05 08:41:16] ID_LIKE="rhel fedora"
[2025-06-05 08:41:16] VERSION_ID="7"
[2025-06-05 08:41:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:41:16] ANSI_COLOR="0;31"
[2025-06-05 08:41:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:41:16] HOME_URL="https://www.centos.org/"
[2025-06-05 08:41:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:41:16] 
[2025-06-05 08:41:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:41:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:41:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:41:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:41:16] 
[2025-06-05 08:41:16] 2025-06-05 06:39:49,058 | INFO     | **************************************
[2025-06-05 08:41:16] 2025-06-05 06:39:49,562 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-05 08:41:16] 2025-06-05 06:39:49,587 | INFO     | sufficient remaining disk space (3268706041856 B)
[2025-06-05 08:41:16] 2025-06-05 06:39:49,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:41:16] 2025-06-05 06:39:49,587 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:41:16] 2025-06-05 06:39:49,587 | INFO     | update_server=False
[2025-06-05 08:41:16] 2025-06-05 06:39:49,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:41:16] 2025-06-05 06:39:49,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:41:16] 2025-06-05 06:39:49,588 | INFO     | aborting loop
[2025-06-05 08:41:16] 2025-06-05 06:39:49,630 | INFO     | PID=1304496 has CPU usage=20.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:41:16] 2025-06-05 06:39:49,630 | INFO     | .. there are 14 such processes running
[2025-06-05 08:41:16] 2025-06-05 06:39:49,631 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:41:16] 2025-06-05 06:39:49,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:41:16] 2025-06-05 06:39:49,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:41:16] 2025-06-05 06:39:49,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:41:16] 2025-06-05 06:39:49,990 | INFO     | all data control threads have been joined
[2025-06-05 08:41:16] 2025-06-05 06:39:50,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:41:16] 2025-06-05 06:39:50,256 | INFO     | all job control threads have been joined
[2025-06-05 08:41:16] 2025-06-05 06:39:50,592 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:50,593 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:50,863 | INFO     | all payload control threads have been joined
[2025-06-05 08:41:16] 2025-06-05 06:39:50,968 | INFO     | [job] validate thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:50,995 | INFO     | [data] control thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,036 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,262 | INFO     | [job] control thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,452 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,551 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:41:16] 2025-06-05 06:39:51,605 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,643 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,869 | INFO     | [payload] control thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:51,939 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:52,069 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:52,563 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:54,040 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:41:16] 2025-06-05 06:39:54,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22485597173568)>', '<ExcThread(monitor, started 22485005195008)>']
[2025-06-05 08:41:16] 2025-06-05 06:39:55,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:41:16] 2025-06-05 06:39:55,653 | INFO     | [monitor] control thread has ended
[2025-06-05 08:41:16] 2025-06-05 06:39:59,784 | INFO     | all workflow threads have been joined
[2025-06-05 08:41:16] 2025-06-05 06:39:59,785 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:41:16] 2025-06-05 06:39:59,785 | INFO     | traces error code: 0
[2025-06-05 08:41:16] 2025-06-05 06:39:59,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:41:16] 2025-06-05 06:39:59,921 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:41:16] 2025-06-05 06:39:59,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:41:16] 2025-06-05 06:39:59,928 [wrapper] pilotpid: 1304496
[2025-06-05 08:41:16] 2025-06-05 06:39:59,932 [wrapper] Pilot exit status: 0
[2025-06-05 08:41:16] 2025-06-05 06:39:59,943 [wrapper] pandaids: 6678071051
[2025-06-05 08:41:16] 2025-06-05 06:40:00,078 [wrapper] cleanup supervisor_pilot 1847193 1304497
[2025-06-05 08:41:16] 2025-06-05 06:40:00,081 [wrapper] Test setup, not cleaning
[2025-06-05 08:41:16] 2025-06-05 06:40:00,085 [wrapper] apfmon messages muted
[2025-06-05 08:41:16] 2025-06-05 06:40:00,089 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:41:16] 2025-06-05 06:40:00,092 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:41:16]  *** Error codes and diagnostics ***
[2025-06-05 08:41:16]     "exeErrorCode": 0,
[2025-06-05 08:41:16]     "exeErrorDiag": "",
[2025-06-05 08:41:16]     "pilotErrorCode": 0,
[2025-06-05 08:41:16]     "pilotErrorDiag": "",
[2025-06-05 08:41:16]  *** Listing of results directory ***
[2025-06-05 08:41:16] total 388984
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:09 pilot3.tar.gz
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:33 queuedata.json
[2025-06-05 08:41:16] -rwx------ 1 boinc boinc     37140 Jun  3 22:34 runpilot2-wrapper.sh
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc       100 Jun  5 06:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:41:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 06:33 run_atlas
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc       105 Jun  5 06:33 job.xml
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc      6682 Jun  5 06:33 init_data.xml
[2025-06-05 08:41:16] -rw-r--r-- 2 boinc boinc 213823459 Jun  5 06:33 EVNT.45006593._001802.pool.root.1
[2025-06-05 08:41:16] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:33 start_atlas.sh
[2025-06-05 08:41:16] drwxrwx--x 2 boinc boinc      4096 Jun  5 06:33 shared
[2025-06-05 08:41:16] -rw-r--r-- 2 boinc boinc    508878 Jun  5 06:33 input.tar.gz
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc         0 Jun  5 06:33 boinc_lockfile
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc      2525 Jun  5 06:33 pandaJob.out
[2025-06-05 08:41:16] -rw------- 1 boinc boinc    987109 Jun  5 06:33 agis_schedconf.cvmfs.json
[2025-06-05 08:41:16] -rw------- 1 boinc boinc   1598969 Jun  5 06:33 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:41:16] drwx------ 4 boinc boinc      4096 Jun  5 06:33 pilot3
[2025-06-05 08:41:16] -rw------- 1 boinc boinc 178657054 Jun  5 08:39 HITS.45006595._044926.pool.root.1
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc       528 Jun  5 08:39 boinc_task_state.xml
[2025-06-05 08:41:16] -rw------- 1 boinc boinc      1028 Jun  5 08:39 memory_monitor_summary.json
[2025-06-05 08:41:16] -rw------- 1 boinc boinc    278776 Jun  5 08:39 log.45006595._044926.job.log.tgz.1
[2025-06-05 08:41:16] -rw------- 1 boinc boinc        95 Jun  5 08:39 pilot_heartbeat.json
[2025-06-05 08:41:16] -rw------- 1 boinc boinc      7699 Jun  5 08:39 heartbeat.json
[2025-06-05 08:41:16] -rw------- 1 boinc boinc      4760 Jun  5 08:39 pilotlog.txt
[2025-06-05 08:41:16] -rw------- 1 boinc boinc    720961 Jun  5 08:40 log.45006595._044926.job.log.1
[2025-06-05 08:41:16] -rw------- 1 boinc boinc       357 Jun  5 08:40 output.list
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:40 runtime_log
[2025-06-05 08:41:16] -rw------- 1 boinc boinc   1024000 Jun  5 08:40 result.tar.gz
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc      9025 Jun  5 08:40 runtime_log.err
[2025-06-05 08:41:16] -rw------- 1 boinc boinc       663 Jun  5 08:40 fUZKDm1Vng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm03lKDmv98KDm.diag
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc        26 Jun  5 08:40 wrapper_checkpoint.txt
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:41 boinc_mmap_file
[2025-06-05 08:41:16] -rw-r--r-- 1 boinc boinc     21005 Jun  5 08:41 stderr.txt
[2025-06-05 08:41:16] HITS file was successfully produced:
[2025-06-05 08:41:16] -rw------- 1 boinc boinc 178657054 Jun  5 08:39 shared/HITS.pool.root.1
[2025-06-05 08:41:16]  *** Contents of shared directory: ***
[2025-06-05 08:41:16] total 384808
[2025-06-05 08:41:16] -rw-r--r-- 2 boinc boinc 213823459 Jun  5 06:33 ATLAS.root_0
[2025-06-05 08:41:16] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:33 start_atlas.sh
[2025-06-05 08:41:16] -rw-r--r-- 2 boinc boinc    508878 Jun  5 06:33 input.tar.gz
[2025-06-05 08:41:16] -rw------- 1 boinc boinc 178657054 Jun  5 08:39 HITS.pool.root.1
[2025-06-05 08:41:16] -rw------- 1 boinc boinc   1024000 Jun  5 08:40 result.tar.gz
08:41:17 (1300598): run_atlas exited; CPU time 29335.227550
08:41:17 (1300598): called boinc_finish(0)

</stderr_txt>
]]>

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