Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 14:21:38 (23080): Detected: vboxwrapper 26206
2025-06-06 14:21:38 (23080): Detected: BOINC client v7.20.2
2025-06-06 14:21:39 (23080): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-06 14:21:39 (23080): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 14:21:40 (23080): Create VM. (boinc_a65be10b75f410a9, slot#1)
2025-06-06 14:21:40 (23080): Setting Memory Size for VM. (4800MB)
2025-06-06 14:21:40 (23080): Setting CPU Count for VM. (8)
2025-06-06 14:21:41 (23080): Setting Chipset Options for VM.
2025-06-06 14:21:41 (23080): Setting Graphics Controller Options for VM.
2025-06-06 14:21:41 (23080): Setting Boot Options for VM.
2025-06-06 14:21:42 (23080): Setting Network Configuration for NAT.
2025-06-06 14:21:42 (23080): Enabling VM Network Access.
2025-06-06 14:21:42 (23080): Disabling USB Support for VM.
2025-06-06 14:21:42 (23080): Disabling COM Port Support for VM.
2025-06-06 14:21:43 (23080): Disabling LPT Port Support for VM.
2025-06-06 14:21:43 (23080): Disabling Audio Support for VM.
2025-06-06 14:21:43 (23080): Disabling Clipboard Support for VM.
2025-06-06 14:21:43 (23080): Disabling Drag and Drop Support for VM.
2025-06-06 14:21:44 (23080): Adding storage controller(s) to VM.
2025-06-06 14:21:44 (23080): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 14:21:47 (23080): Adding VirtualBox Guest Additions to VM.
2025-06-06 14:21:47 (23080): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 14:21:47 (23080): forwarding host port 54656 to guest port 80
2025-06-06 14:21:47 (23080): Enabling remote desktop for VM.
2025-06-06 14:21:48 (23080): Required extension pack not installed, remote desktop not enabled.
2025-06-06 14:21:48 (23080): Enabling shared directory for VM.
2025-06-06 14:21:48 (23080): Starting VM using VBoxManage interface. (boinc_a65be10b75f410a9, slot#1)
2025-06-06 14:21:55 (23080): Successfully started VM. (PID = '19068')
2025-06-06 14:21:55 (23080): Reporting VM Process ID to BOINC.
2025-06-06 14:21:55 (23080): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-06 14:21:55 (23080): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 14:21:55 (23080): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 14:21:55 (23080): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 14:21:55 (23080): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 14:21:55 (23080): Detected: Web Application Enabled (http://localhost:54656)
2025-06-06 14:21:55 (23080): Preference change detected
2025-06-06 14:21:55 (23080): Setting CPU throttle for VM. (100%)
2025-06-06 14:21:55 (23080): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 20 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 14:21:57 (23080): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 14:21:57 (23080): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 14:22:00 (23080): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 14:22:00 (23080): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 14:22:00 (23080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 14:22:07 (23080): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 14:22:07 (23080): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 14:22:13 (23080): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000156 main     Log opened 2025-06-06T14:22:11.654409000Z
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000278 main     OS Product: Linux
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000315 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000349 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000381 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000382 main     Process ID: 1373
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.000383 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 14:22:13 (23080): Guest Log: 00:00:00.002302 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 14:22:13 (23080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 14:22:13 (23080): Guest Log: [INFO] Mounting shared directory
2025-06-06 14:22:13 (23080): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 14:22:16 (23080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 14:22:16 (23080): Guest Log: [INFO] Detected branch: prod
2025-06-06 14:22:16 (23080): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 14:22:16 (23080): Guest Log: Copying input files
2025-06-06 14:22:17 (23080): Guest Log: Copied input files into RunAtlas.
2025-06-06 14:22:17 (23080): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 14:22:17 (23080): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 14:22:17 (23080): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 14:22:17 (23080): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 14:22:23 (23080): Guest Log: 00:00:10.019102 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 272 872 000ns (GuestNow=1 749 212 542 385 224 000 ns GuestLast=1 749 219 731 658 096 000 ns fSetTimeLastLoop=true )
2025-06-06 14:22:32 (23080): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 14:22:32 (23080): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 14:22:32 (23080): Guest Log: 2.6.3.0 1649 0 30144 146857 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 14:22:33 (23080): Guest Log: copied the webapp to /var/www
2025-06-06 14:22:33 (23080): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-06 14:22:33 (23080): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-06 14:22:34 (23080): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 14:22:34 (23080): Guest Log:  *** Starting ATLAS job. (PandaID=6677782274 taskID=45006595) ***
2025-06-06 14:28:53 (23080): Preference change detected
2025-06-06 14:28:53 (23080): Setting CPU throttle for VM. (100%)
2025-06-06 14:28:53 (23080): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 20 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 16:03:10 (23080): Status Report: Elapsed Time: '6000.000000'
2025-06-06 16:03:10 (23080): Status Report: CPU Time: '35932.031250'
2025-06-06 16:39:18 (23080): Guest Log:  *** Job finished ***
2025-06-06 16:39:18 (23080): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:03,673 | INFO     | [data] queue_monitor thread has finished
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:10,200 | INFO     | job.realtimelogging is not enabled
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:11,201 | INFO     | [payload] run_realtimelog thread has finished
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:11,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393809930048)>', '<ExcThread(monitor, started 140392993376000)>']
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:11,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:11,811 | INFO     | [monitor] control thread has ended
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,502 | INFO     | all workflow threads have been joined
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,503 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,503 | INFO     | traces error code: 0
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,580 [wrapper] ==== pilot stdout END ====
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,584 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,587 [wrapper] pilotpid: 6020
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:16,591 [wrapper] Pilot exit status: 0
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:17,376 [wrapper] pandaids: 6677782274
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:17,409 [wrapper] cleanup supervisor_pilot  3835 6021
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:17,414 [wrapper] Test setup, not cleaning
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:17,420 [wrapper] apfmon messages muted
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:17,426 [wrapper] ==== wrapper stdout END ====
2025-06-06 16:39:18 (23080): Guest Log: 2025-06-06 14:39:17,429 [wrapper] ==== wrapper stderr END ====
2025-06-06 16:39:18 (23080): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 16:39:18 (23080): Guest Log:     "exeErrorCode": 0,
2025-06-06 16:39:18 (23080): Guest Log:     "exeErrorDiag": "",
2025-06-06 16:39:18 (23080): Guest Log:     "pilotErrorCode": 0,
2025-06-06 16:39:18 (23080): Guest Log:     "pilotErrorDiag": "",
2025-06-06 16:39:18 (23080): Guest Log:  *** Listing of results directory ***
2025-06-06 16:39:18 (23080): Guest Log: total 177592
2025-06-06 16:39:18 (23080): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 16:39 pilot3.tar.gz
2025-06-06 16:39:18 (23080): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 16:40 queuedata.json
2025-06-06 16:39:18 (23080): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 16:41 runpilot2-wrapper.sh
2025-06-06 16:39:18 (23080): Guest Log: -rwxr-xr-x. 1 atlas atlas      8888 Jun  6 12:22 init_data.xml
2025-06-06 16:39:18 (23080): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 Jun  6 12:22 input.tar.gz
2025-06-06 16:39:18 (23080): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 12:22 start_atlas.sh
2025-06-06 16:39:18 (23080): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 12:22 EVNT.45006593._001557.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 16:39:18 (23080): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  6 12:22 pandaJob.out
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas    985741 Jun  6 12:25 agis_schedconf.cvmfs.json
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 12:25 agis_ddmendpoints.agis.ALL.json
2025-06-06 16:39:18 (23080): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 12:25 pilot3
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas 176123745 Jun  6 14:38 HITS.45006595._038818.pool.root.1
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 14:38 pilot_heartbeat.json
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas      1032 Jun  6 14:38 memory_monitor_summary.json
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas    325018 Jun  6 14:38 log.45006595._038818.job.log.tgz.1
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas      7689 Jun  6 14:38 heartbeat.json
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  6 14:39 pilotlog.txt
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas    661681 Jun  6 14:39 log.45006595._038818.job.log.1
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 14:39 output.list
2025-06-06 16:39:18 (23080): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 14:39 runtime_log
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas   1003520 Jun  6 14:39 result.tar.gz
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas       668 Jun  6 14:39 UFHKDmWsjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm34kKDmRSIWOn.diag
2025-06-06 16:39:18 (23080): Guest Log: -rw-r--r--. 1 atlas atlas      8621 Jun  6 14:39 runtime_log.err
2025-06-06 16:39:18 (23080): Guest Log: Looking for outputfile HITS.45006595._038818.pool.root.1
2025-06-06 16:39:18 (23080): Guest Log: HITS file was successfully produced
2025-06-06 16:39:18 (23080): Guest Log: -rw-------. 1 atlas atlas 176123745 Jun  6 14:38 /home/atlas/RunAtlas/HITS.45006595._038818.pool.root.1
2025-06-06 16:39:19 (23080): Guest Log: Successfully finished the ATLAS job!
2025-06-06 16:39:19 (23080): Guest Log: Copying the results back to the shared directory!
2025-06-06 16:39:19 (23080): Guest Log:  *** Contents of shared directory: ***
2025-06-06 16:39:20 (23080): Guest Log: total 382160
2025-06-06 16:39:20 (23080): Guest Log: -rwxrwxrwx. 1 root root 213660652 Jun  6 12:21 ATLAS.root_0
2025-06-06 16:39:20 (23080): Guest Log: -rwxrwxrwx. 1 root root 176123745 Jun  6 14:39 HITS.pool.root.1
2025-06-06 16:39:20 (23080): Guest Log: -rwxrwxrwx. 1 root root      8888 Jun  6 12:21 init_data.xml
2025-06-06 16:39:20 (23080): Guest Log: -rwxrwxrwx. 1 root root    508878 Jun  3 22:21 input.tar.gz
2025-06-06 16:39:20 (23080): Guest Log: -rwxrwxrwx. 1 root root   1003520 Jun  6 14:39 result.tar.gz
2025-06-06 16:39:20 (23080): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 22:21 start_atlas.sh
2025-06-06 16:39:20 (23080): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 16:39:20 (23080): VM Completion File Detected.
2025-06-06 16:39:20 (23080): Powering off VM.
2025-06-06 16:39:21 (23080): Successfully stopped VM.
2025-06-06 16:39:21 (23080): Deregistering VM. (boinc_a65be10b75f410a9, slot#1)
2025-06-06 16:39:21 (23080): Removing network bandwidth throttle group from VM.
2025-06-06 16:39:21 (23080): Removing VM from VirtualBox.
16:39:27 (23080): called boinc_finish(0)

</stderr_txt>
]]>

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