Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:17 (25445): wrapper (7.7.26015): starting
12:30:17 (25445): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:30:17] Arguments: --nthreads 8
[2025-06-04 12:30:17] Threads: 8
[2025-06-04 12:30:17] Checking for CVMFS
[2025-06-04 12:30:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:30:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:30:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:30:21] 2.11.2.0 361 33114 93348 146777 1 63 18955630 25165825 3906 130560 0 16551997 99.789 20034174 2363 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:30:21] CVMFS is ok
[2025-06-04 12:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:30:21] Checking for apptainer binary...
[2025-06-04 12:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:30:21] Running /usr/bin/apptainer --version
[2025-06-04 12:30:21] apptainer version 1.3.2-1.el7
[2025-06-04 12:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:41:06] cg-vwn321.simple-grid.lan
[2025-06-04 12:41:06] apptainer works
[2025-06-04 12:41:06] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:41:06] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:41:06] Starting ATLAS job with PandaID=6677441698
[2025-06-04 12:41:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:02:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:02:11] 2025-06-04 14:45:43,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:02:11] 2025-06-04 14:45:43,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:02:11] 2025-06-04 14:45:43,222 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:02:11] 2025-06-04 14:45:43,223 | INFO     | sum of square deviations: 3772712597.5
[2025-06-04 19:02:11] 2025-06-04 14:45:43,225 | INFO     | sum of deviations: 68336319940.000046
[2025-06-04 19:02:11] 2025-06-04 14:45:43,225 | INFO     | mean x: 1749041307.5
[2025-06-04 19:02:11] 2025-06-04 14:45:43,226 | INFO     | mean y: 2435791.6869565216
[2025-06-04 19:02:11] 2025-06-04 14:45:43,226 | INFO     | -- intersect: -31678494914.987686
[2025-06-04 19:02:11] 2025-06-04 14:45:43,226 | INFO     | intersect: -31678494914.987686
[2025-06-04 19:02:11] 2025-06-04 14:45:43,226 | INFO     | chi2: 5.1427379686217725
[2025-06-04 19:02:11] 2025-06-04 14:45:43,227 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,229 | INFO     | sum of deviations: 81833456941.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,229 | INFO     | mean x: 1749041155.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,229 | INFO     | mean y: 2444171.32
[2025-06-04 19:02:11] 2025-06-04 14:45:43,229 | INFO     | -- intersect: -40521669671.25655
[2025-06-04 19:02:11] 2025-06-04 14:45:43,229 | INFO     | intersect: -40521669671.25655
[2025-06-04 19:02:11] 2025-06-04 14:45:43,230 | INFO     | chi2: 4.401999600942787
[2025-06-04 19:02:11] 2025-06-04 14:45:43,230 | INFO     | current chi2=4.401999600942787 (change=14.403579809015616 %)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,230 | INFO     | right removable region: 224
[2025-06-04 19:02:11] 2025-06-04 14:45:43,230 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,232 | INFO     | sum of deviations: -4592895814.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,232 | INFO     | mean x: 1749041460.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,233 | INFO     | mean y: 2481916.4844444445
[2025-06-04 19:02:11] 2025-06-04 14:45:43,233 | INFO     | -- intersect: 2276894757.4840446
[2025-06-04 19:02:11] 2025-06-04 14:45:43,233 | INFO     | intersect: 2276894757.4840446
[2025-06-04 19:02:11] 2025-06-04 14:45:43,233 | INFO     | chi2: 1.182616843630285
[2025-06-04 19:02:11] 2025-06-04 14:45:43,233 | INFO     | current chi2=1.182616843630285 (change=77.00413960722909 %)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,234 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,236 | INFO     | sum of deviations: -19493959100.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,236 | INFO     | mean x: 1749041612.5
[2025-06-04 19:02:11] 2025-06-04 14:45:43,236 | INFO     | mean y: 2491676.8363636364
[2025-06-04 19:02:11] 2025-06-04 14:45:43,236 | INFO     | -- intersect: 10329218756.046017
[2025-06-04 19:02:11] 2025-06-04 14:45:43,236 | INFO     | intersect: 10329218756.046017
[2025-06-04 19:02:11] 2025-06-04 14:45:43,236 | INFO     | chi2: 0.8817280699408381
[2025-06-04 19:02:11] 2025-06-04 14:45:43,237 | INFO     | current chi2=0.8817280699408381 (change=25.442625420910392 %)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,237 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,239 | INFO     | sum of deviations: -12421674366.000002
[2025-06-04 19:02:11] 2025-06-04 14:45:43,239 | INFO     | mean x: 1749041765.0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,239 | INFO     | mean y: 2486770.6372093023
[2025-06-04 19:02:11] 2025-06-04 14:45:43,239 | INFO     | -- intersect: 7052597071.127453
[2025-06-04 19:02:11] 2025-06-04 14:45:43,239 | INFO     | intersect: 7052597071.127453
[2025-06-04 19:02:11] 2025-06-04 14:45:43,240 | INFO     | chi2: 0.8516039119258536
[2025-06-04 19:02:11] 2025-06-04 14:45:43,240 | INFO     | current chi2=0.8516039119258536 (change=3.416490757406162 %)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,240 | INFO     | left removable region: 30
[2025-06-04 19:02:11] 2025-06-04 14:45:43,240 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 19:02:11] 2025-06-04 14:45:43,242 | INFO     | sum of deviations: 6946624276.499999
[2025-06-04 19:02:11] 2025-06-04 14:45:43,242 | INFO     | mean x: 1749042039.5
[2025-06-04 19:02:11] 2025-06-04 14:45:43,242 | INFO     | mean y: 2493152.706185567
[2025-06-04 19:02:11] 2025-06-04 14:45:43,243 | INFO     | -- intersect: -5364140919.903183
[2025-06-04 19:02:11] 2025-06-04 14:45:43,243 | INFO     | intersect: -5364140919.903183
[2025-06-04 19:02:11] 2025-06-04 14:45:43,243 | INFO     | chi2: 0.0015073852995264112
[2025-06-04 19:02:11] 2025-06-04 14:45:43,243 | INFO     | -- intersect: -5364140919.903183
[2025-06-04 19:02:11] 2025-06-04 14:45:43,243 | INFO     | current memory leak: 3.07 B/s (using 194 data points, chi2=0.00)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,244 | INFO     | ..............................
[2025-06-04 19:02:11] 2025-06-04 14:45:43,244 | INFO     | . Timing measurements:
[2025-06-04 19:02:11] 2025-06-04 14:45:43,244 | INFO     | . get job = 0 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,245 | INFO     | . initial setup = 9 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,245 | INFO     | . payload setup = 154 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,245 | INFO     | . stage-in = 0 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,245 | INFO     | . payload execution = 14141 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,245 | INFO     | . stage-out = 1 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,246 | INFO     | . log creation = 0 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,246 | INFO     | ..............................
[2025-06-04 19:02:11] 2025-06-04 14:45:43,385 | INFO     | 
[2025-06-04 19:02:11] 2025-06-04 14:45:43,385 | INFO     | job summary report
[2025-06-04 19:02:11] 2025-06-04 14:45:43,385 | INFO     | --------------------------------------------------
[2025-06-04 19:02:11] 2025-06-04 14:45:43,385 | INFO     | PanDA job id: 6677441698
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | task id: 45006595
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | errors: (none)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | pilot state: finished 
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | transexitcode: 0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | exeerrorcode: 0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | exeerrordiag: 
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | exitcode: 0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,386 | INFO     | exitmsg: OK
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | cpuconsumptiontime: 51612 s
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | nevents: 400
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | neventsw: 0
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | pid: 17724
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | pgrp: 17724
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | corecount: 8
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | event service: False
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | sizes: {0: 2404955, 1: 2405210, 2: 2405238, 12: 2405238, 23: 2405266, 34: 2405294, 45: 2405450, 55: 2405478, 66: 2405506, 73: 2405740, 77: 2405768, 14299: 2435870,
[2025-06-04 19:02:11] 2025-06-04 14:45:43,387 | INFO     | --------------------------------------------------
[2025-06-04 19:02:11] 2025-06-04 14:45:43,388 | INFO     | 
[2025-06-04 19:02:11] 2025-06-04 14:45:43,388 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 19:02:11] 2025-06-04 14:45:43,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,450 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:02:11] 2025-06-04 14:45:43,450 | INFO     | job 6677441698 has completed (purged errors)
[2025-06-04 19:02:11] 2025-06-04 14:45:43,450 | INFO     | overall cleanup function is called
[2025-06-04 19:02:11] 2025-06-04 14:45:43,570 | INFO     | PID=5152 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 19:02:11] 2025-06-04 14:45:43,571 | INFO     | .. there are 9 such processes running
[2025-06-04 19:02:11] 2025-06-04 14:45:44,462 | INFO     | --- collectZombieJob: --- 10, [17724]
[2025-06-04 19:02:11] 2025-06-04 14:45:44,462 | INFO     | zombie collector waiting for pid 17724
[2025-06-04 19:02:11] 2025-06-04 14:45:44,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:02:11] 2025-06-04 14:45:44,462 | INFO     | collected zombie processes
[2025-06-04 19:02:11] 2025-06-04 14:45:44,462 | INFO     | will attempt to kill all subprocesses of pid=17724
[2025-06-04 19:02:11] 2025-06-04 14:45:44,563 | INFO     | process IDs to be killed: [17724] (in reverse order)
[2025-06-04 19:02:11] 2025-06-04 14:45:44,681 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:02:11] 2025-06-04 14:45:44,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:02:11] 2025-06-04 14:45:44,686 | INFO     | did not find any defunct processes belonging to 17724
[2025-06-04 19:02:11] 2025-06-04 14:45:44,689 | INFO     | did not find any defunct processes belonging to 17724
[2025-06-04 19:02:11] 2025-06-04 14:45:44,690 | INFO     | ready for new job
[2025-06-04 19:02:11] 2025-06-04 14:45:44,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:02:11] 2025-06-04 14:45:44,692 | INFO     | **************************************
[2025-06-04 19:02:11] 2025-06-04 14:45:44,692 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:02:11] 2025-06-04 14:45:44,692 | INFO     | **************************************
[2025-06-04 19:02:11] 2025-06-04 14:45:44,692 | INFO     | 
[2025-06-04 19:02:11] 2025-06-04 14:45:44,693 | INFO     | pilot is running in a VM
[2025-06-04 19:02:11] 2025-06-04 14:45:44,693 | INFO     | architecture information:
[2025-06-04 19:02:11] 2025-06-04 14:45:44,694 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:02:11] 2025-06-04 14:45:44,727 | INFO     | cat /etc/os-release:
[2025-06-04 19:02:11] NAME="CentOS Linux"
[2025-06-04 19:02:11] VERSION="7 (Core)"
[2025-06-04 19:02:11] ID="centos"
[2025-06-04 19:02:11] ID_LIKE="rhel fedora"
[2025-06-04 19:02:11] VERSION_ID="7"
[2025-06-04 19:02:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:02:11] ANSI_COLOR="0;31"
[2025-06-04 19:02:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:02:11] HOME_URL="https://www.centos.org/"
[2025-06-04 19:02:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:02:11] 
[2025-06-04 19:02:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:02:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:02:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:02:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:02:11] 
[2025-06-04 19:02:11] 2025-06-04 14:45:44,727 | INFO     | **************************************
[2025-06-04 19:02:11] 2025-06-04 14:45:45,230 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 19:02:11] 2025-06-04 14:45:45,258 | INFO     | sufficient remaining disk space (496731422720 B)
[2025-06-04 19:02:11] 2025-06-04 14:45:45,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:02:11] 2025-06-04 14:45:45,259 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:02:11] 2025-06-04 14:45:45,259 | INFO     | update_server=False
[2025-06-04 19:02:11] 2025-06-04 14:45:45,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:02:11] 2025-06-04 14:45:45,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:02:11] 2025-06-04 14:45:45,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:02:11] 2025-06-04 14:45:45,276 | INFO     | all data control threads have been joined
[2025-06-04 19:02:11] 2025-06-04 14:45:45,407 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 19:02:11] 2025-06-04 14:45:45,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 19:02:11] 2025-06-04 14:45:45,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:02:11] 2025-06-04 14:45:45,407 | INFO     | will abort loop
[2025-06-04 19:02:11] 2025-06-04 14:45:45,579 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:02:11] 2025-06-04 14:45:45,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:02:11] 2025-06-04 14:45:45,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:02:11] 2025-06-04 14:45:45,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:02:11] 2025-06-04 14:45:46,265 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,265 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,282 | INFO     | [data] control thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,406 | INFO     | all payload control threads have been joined
[2025-06-04 19:02:11] 2025-06-04 14:45:46,414 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,435 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,703 | INFO     | all job control threads have been joined
[2025-06-04 19:02:11] 2025-06-04 14:45:46,915 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,943 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:46,961 | INFO     | [job] validate thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:47,096 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:47,267 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:47,332 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:47,412 | INFO     | [payload] control thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:47,677 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:47,708 | INFO     | [job] control thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:49,786 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:02:11] 2025-06-04 14:45:50,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664476845888)>', '<ExcThread(monitor, started 139664165934848)>']
[2025-06-04 19:02:11] 2025-06-04 14:45:50,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:02:11] 2025-06-04 14:45:50,608 | INFO     | [monitor] control thread has ended
[2025-06-04 19:02:11] 2025-06-04 14:45:55,328 | INFO     | all workflow threads have been joined
[2025-06-04 19:02:11] 2025-06-04 14:45:55,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:02:11] 2025-06-04 14:45:55,328 | INFO     | traces error code: 0
[2025-06-04 19:02:11] 2025-06-04 14:45:55,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:02:11] 2025-06-04 14:45:55,579 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:02:11] 2025-06-04 14:45:55,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:02:11] 2025-06-04 14:45:55,672 [wrapper] pilotpid: 5152
[2025-06-04 19:02:11] 2025-06-04 14:45:55,744 [wrapper] Pilot exit status: 0
[2025-06-04 19:02:11] 2025-06-04 14:45:55,896 [wrapper] pandaids: 6677441698
[2025-06-04 19:02:11] 2025-06-04 14:45:55,939 [wrapper] cleanup supervisor_pilot 14198 5153
[2025-06-04 19:02:11] 2025-06-04 14:45:55,983 [wrapper] Test setup, not cleaning
[2025-06-04 19:02:11] 2025-06-04 14:45:56,069 [wrapper] apfmon messages muted
[2025-06-04 19:02:11] 2025-06-04 14:45:56,158 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:02:11] 2025-06-04 14:45:56,282 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:02:11]  *** Error codes and diagnostics ***
[2025-06-04 19:02:11]     "exeErrorCode": 0,
[2025-06-04 19:02:11]     "exeErrorDiag": "",
[2025-06-04 19:02:11]     "pilotErrorCode": 0,
[2025-06-04 19:02:11]     "pilotErrorDiag": "",
[2025-06-04 19:02:11]  *** Listing of results directory ***
[2025-06-04 19:02:11] total 395944
[2025-06-04 19:02:11] -rwx------. 1 boinc boinc     37140 Jun  3 03:09 runpilot2-wrapper.sh
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:09 queuedata.json
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:09 pilot3.tar.gz
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:02:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:30 run_atlas
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:30 job.xml
[2025-06-04 19:02:11] -rw-r--r--. 2 boinc boinc 216249684 Jun  4 12:30 EVNT.45006593._000638.pool.root.1
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc      6391 Jun  4 12:30 init_data.xml
[2025-06-04 19:02:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:30 start_atlas.sh
[2025-06-04 19:02:11] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:30 shared
[2025-06-04 19:02:11] -rw-r--r--. 2 boinc boinc    508864 Jun  4 12:30 input.tar.gz
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:30 boinc_lockfile
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc      2524 Jun  4 12:41 pandaJob.out
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc    986812 Jun  4 12:44 agis_schedconf.cvmfs.json
[2025-06-04 19:02:11] drwx------. 4 boinc boinc      4096 Jun  4 12:44 pilot3
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc       531 Jun  4 16:44 boinc_task_state.xml
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc 182116827 Jun  4 16:44 HITS.45006595._015938.pool.root.1
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc        95 Jun  4 16:44 pilot_heartbeat.json
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc      1015 Jun  4 16:45 memory_monitor_summary.json
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc   1598969 Jun  4 16:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc    385307 Jun  4 16:45 log.45006595._015938.job.log.tgz.1
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc      7687 Jun  4 16:45 heartbeat.json
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc      4602 Jun  4 16:45 pilotlog.txt
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc   1241046 Jun  4 16:45 log.45006595._015938.job.log.1
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc       357 Jun  4 16:45 output.list
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:45 runtime_log
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc   1648640 Jun  4 16:45 result.tar.gz
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc      8659 Jun  4 16:45 runtime_log.err
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc       657 Jun  4 16:45 kiwKDmuKVg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm52WKDmWxDE1n.diag
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:02 boinc_mmap_file
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:02 wrapper_checkpoint.txt
[2025-06-04 19:02:11] -rw-r--r--. 1 boinc boinc     20600 Jun  4 19:02 stderr.txt
[2025-06-04 19:02:11] HITS file was successfully produced:
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc 182116827 Jun  4 16:44 shared/HITS.pool.root.1
[2025-06-04 19:02:11]  *** Contents of shared directory: ***
[2025-06-04 19:02:11] total 391164
[2025-06-04 19:02:11] -rw-r--r--. 2 boinc boinc 216249684 Jun  4 12:30 ATLAS.root_0
[2025-06-04 19:02:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:30 start_atlas.sh
[2025-06-04 19:02:11] -rw-r--r--. 2 boinc boinc    508864 Jun  4 12:30 input.tar.gz
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc 182116827 Jun  4 16:44 HITS.pool.root.1
[2025-06-04 19:02:11] -rw-------. 1 boinc boinc   1648640 Jun  4 16:45 result.tar.gz
19:02:13 (25445): run_atlas exited; CPU time 51808.051118
19:02:13 (25445): called boinc_finish(0)

</stderr_txt>
]]>

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