Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:49 (3791611): wrapper (7.7.26015): starting
11:12:49 (3791611): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 11:12:49] Arguments: --nthreads 4
[2025-06-05 11:12:49] Threads: 4
[2025-06-05 11:12:49] Checking for CVMFS
[2025-06-05 11:12:49] No cvmfs_config command found, will try listing directly
[2025-06-05 11:12:49] CVMFS is ok
[2025-06-05 11:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:12:49] Further information can be found at the LHC@home message board.
[2025-06-05 11:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:12:49] Checking for apptainer binary...
[2025-06-05 11:12:49] which: no apptainer in ((null))
[2025-06-05 11:12:49] apptainer is not installed, using version from CVMFS
[2025-06-05 11:12:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:12:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 11:12:50] apptainer works
[2025-06-05 11:12:50] Set ATHENA_PROC_NUMBER=4
[2025-06-05 11:12:50] Set ATHENA_CORE_NUMBER=4
[2025-06-05 11:12:50] Starting ATLAS job with PandaID=6677920908
[2025-06-05 11:12:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:28:12]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:28:12] 2025-06-05 11:27:57,873 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6677920908/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,873 | INFO     | extracted standard info from prmon json
[2025-06-05 13:28:12] 2025-06-05 11:27:57,874 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:28:12] 2025-06-05 11:27:57,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:28:12] 2025-06-05 11:27:57,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:28:12] 2025-06-05 11:27:57,874 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:28:12] 2025-06-05 11:27:57,876 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:28:12] 2025-06-05 11:27:57,877 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | sum of deviations: 19271804633.499992
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | mean x: 1749118812.5
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | mean y: 2283339.5833333335
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | -- intersect: -47265627037.71757
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | intersect: -47265627037.71757
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | chi2: 1.7697812091377485
[2025-06-05 13:28:12] 2025-06-05 11:27:57,878 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,879 | INFO     | sum of deviations: 18524652142.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,879 | INFO     | mean x: 1749118660.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,879 | INFO     | mean y: 2281878.37007874
[2025-06-05 13:28:12] 2025-06-05 11:27:57,880 | INFO     | -- intersect: -51013749930.56926
[2025-06-05 13:28:12] 2025-06-05 11:27:57,880 | INFO     | intersect: -51013749930.56926
[2025-06-05 13:28:12] 2025-06-05 11:27:57,880 | INFO     | chi2: 1.7723361478278052
[2025-06-05 13:28:12] 2025-06-05 11:27:57,880 | INFO     | current chi2=1.7723361478278052 (change=-0.14436466365814377 %)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,880 | INFO     | right removable region: 126
[2025-06-05 13:28:12] 2025-06-05 11:27:57,880 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,881 | INFO     | sum of deviations: -2644555996.9999995
[2025-06-05 13:28:12] 2025-06-05 11:27:57,881 | INFO     | mean x: 1749118965.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,881 | INFO     | mean y: 2325567.748031496
[2025-06-05 13:28:12] 2025-06-05 11:27:57,881 | INFO     | -- intersect: 7285311253.786904
[2025-06-05 13:28:12] 2025-06-05 11:27:57,881 | INFO     | intersect: 7285311253.786904
[2025-06-05 13:28:12] 2025-06-05 11:27:57,882 | INFO     | chi2: 0.00857734130385834
[2025-06-05 13:28:12] 2025-06-05 11:27:57,882 | INFO     | current chi2=0.00857734130385834 (change=99.51534453752974 %)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,882 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | sum of deviations: -2961775913.4999995
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | mean x: 1749119117.5
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | mean y: 2326195.6967213117
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | -- intersect: 9203491795.548275
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | intersect: 9203491795.548275
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | chi2: 0.003546690003819335
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | current chi2=0.003546690003819335 (change=58.65047363541509 %)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,883 | INFO     | sum of square deviations: 496597218.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,884 | INFO     | sum of deviations: -2805371822.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,884 | INFO     | mean x: 1749119270.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,884 | INFO     | mean y: 2325833.863247863
[2025-06-05 13:28:12] 2025-06-05 11:27:57,884 | INFO     | -- intersect: 9883432162.121433
[2025-06-05 13:28:12] 2025-06-05 11:27:57,884 | INFO     | intersect: 9883432162.121433
[2025-06-05 13:28:12] 2025-06-05 11:27:57,884 | INFO     | chi2: 0.0034232717926880084
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | current chi2=0.0034232717926880084 (change=3.4798138827588763 %)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | left removable region: 30
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | sum of deviations: -1355594704.0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | mean x: 1749119544.5
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | mean y: 2321949.25
[2025-06-05 13:28:12] 2025-06-05 11:27:57,885 | INFO     | -- intersect: 8646114980.29468
[2025-06-05 13:28:12] 2025-06-05 11:27:57,886 | INFO     | intersect: 8646114980.29468
[2025-06-05 13:28:12] 2025-06-05 11:27:57,886 | INFO     | chi2: 0.0026996015852120436
[2025-06-05 13:28:12] 2025-06-05 11:27:57,886 | INFO     | -- intersect: 8646114980.29468
[2025-06-05 13:28:12] 2025-06-05 11:27:57,886 | INFO     | current memory leak: -4.94 B/s (using 96 data points, chi2=0.00)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | ..............................
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . Timing measurements:
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . get job = 0 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . initial setup = 1 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . payload setup = 9 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . stage-in = 0 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . payload execution = 8054 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . stage-out = 0 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | . log creation = 0 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,887 | INFO     | ..............................
[2025-06-05 13:28:12] 2025-06-05 11:27:57,978 | INFO     | 
[2025-06-05 13:28:12] 2025-06-05 11:27:57,978 | INFO     | job summary report
[2025-06-05 13:28:12] 2025-06-05 11:27:57,978 | INFO     | --------------------------------------------------
[2025-06-05 13:28:12] 2025-06-05 11:27:57,978 | INFO     | PanDA job id: 6677920908
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | task id: 45006595
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | errors: (none)
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | pilot state: finished 
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | transexitcode: 0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | exeerrorcode: 0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | exeerrordiag: 
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | exitcode: 0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | exitmsg: OK
[2025-06-05 13:28:12] 2025-06-05 11:27:57,979 | INFO     | cpuconsumptiontime: 30079 s
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | nevents: 400
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | neventsw: 0
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | pid: 3803031
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | pgrp: 3803031
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | corecount: 4
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | event service: False
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | sizes: {0: 2397182, 1: 2397381, 7: 2397587, 11: 2397615, 8067: 2425629, 8069: 2434592, 8071: 2434776, 8077: 2434946}
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | --------------------------------------------------
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | 
[2025-06-05 13:28:12] 2025-06-05 11:27:57,980 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-06-05 13:28:12] 2025-06-05 11:27:58,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:28:12] 2025-06-05 11:27:58,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:28:12] 2025-06-05 11:27:58,010 | INFO     | job 6677920908 has completed (purged errors)
[2025-06-05 13:28:12] 2025-06-05 11:27:58,010 | INFO     | overall cleanup function is called
[2025-06-05 13:28:12] 2025-06-05 11:27:59,019 | INFO     | --- collectZombieJob: --- 10, [3803031]
[2025-06-05 13:28:12] 2025-06-05 11:27:59,019 | INFO     | zombie collector waiting for pid 3803031
[2025-06-05 13:28:12] 2025-06-05 11:27:59,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:28:12] 2025-06-05 11:27:59,019 | INFO     | collected zombie processes
[2025-06-05 13:28:12] 2025-06-05 11:27:59,019 | INFO     | will attempt to kill all subprocesses of pid=3803031
[2025-06-05 13:28:12] 2025-06-05 11:27:59,683 | INFO     | process IDs to be killed: [3803031] (in reverse order)
[2025-06-05 13:28:12] 2025-06-05 11:27:59,917 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:28:12] 2025-06-05 11:27:59,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:28:12] 2025-06-05 11:27:59,945 | INFO     | did not find any defunct processes belonging to 3803031
[2025-06-05 13:28:12] 2025-06-05 11:27:59,970 | INFO     | did not find any defunct processes belonging to 3803031
[2025-06-05 13:28:12] 2025-06-05 11:27:59,970 | INFO     | ready for new job
[2025-06-05 13:28:12] 2025-06-05 11:27:59,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:28:12] 2025-06-05 11:27:59,972 | INFO     | **************************************
[2025-06-05 13:28:12] 2025-06-05 11:27:59,972 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:28:12] 2025-06-05 11:27:59,972 | INFO     | **************************************
[2025-06-05 13:28:12] 2025-06-05 11:27:59,972 | INFO     | 
[2025-06-05 13:28:12] 2025-06-05 11:27:59,980 | INFO     | architecture information:
[2025-06-05 13:28:12] 2025-06-05 11:27:59,980 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:28:12] 2025-06-05 11:28:00,002 | INFO     | cat /etc/os-release:
[2025-06-05 13:28:12] NAME="CentOS Linux"
[2025-06-05 13:28:12] VERSION="7 (Core)"
[2025-06-05 13:28:12] ID="centos"
[2025-06-05 13:28:12] ID_LIKE="rhel fedora"
[2025-06-05 13:28:12] VERSION_ID="7"
[2025-06-05 13:28:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:28:12] ANSI_COLOR="0;31"
[2025-06-05 13:28:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:28:12] HOME_URL="https://www.centos.org/"
[2025-06-05 13:28:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:28:12] 
[2025-06-05 13:28:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:28:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:28:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:28:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:28:12] 
[2025-06-05 13:28:12] 2025-06-05 11:28:00,003 | INFO     | **************************************
[2025-06-05 13:28:12] 2025-06-05 11:28:00,505 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-06-05 13:28:12] 2025-06-05 11:28:00,523 | INFO     | sufficient remaining disk space (3284891860992 B)
[2025-06-05 13:28:12] 2025-06-05 11:28:00,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:28:12] 2025-06-05 11:28:00,523 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:28:12] 2025-06-05 11:28:00,523 | INFO     | update_server=False
[2025-06-05 13:28:12] 2025-06-05 11:28:00,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:28:12] 2025-06-05 11:28:00,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:28:12] 2025-06-05 11:28:00,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:28:12] 2025-06-05 11:28:00,524 | INFO     | aborting loop
[2025-06-05 13:28:12] 2025-06-05 11:28:00,573 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:28:12] 2025-06-05 11:28:00,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:28:12] 2025-06-05 11:28:00,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:28:12] 2025-06-05 11:28:00,669 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-06-05 13:28:12] 2025-06-05 11:28:00,808 | INFO     | all job control threads have been joined
[2025-06-05 13:28:12] 2025-06-05 11:28:00,810 | INFO     | all payload control threads have been joined
[2025-06-05 13:28:12] 2025-06-05 11:28:00,822 | INFO     | all data control threads have been joined
[2025-06-05 13:28:12] 2025-06-05 11:28:01,530 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:01,530 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:01,762 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:01,813 | INFO     | [job] control thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:01,815 | INFO     | [payload] control thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:01,827 | INFO     | [data] control thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:01,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,069 | INFO     | [job] validate thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,239 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,288 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,316 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:28:12] 2025-06-05 11:28:02,389 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,530 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,746 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:02,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:28:12] 2025-06-05 11:28:03,997 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:06,339 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:28:12] 2025-06-05 11:28:07,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22853812062016)>', '<ExcThread(monitor, started 22853575476992)>']
[2025-06-05 13:28:12] 2025-06-05 11:28:07,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:28:12] 2025-06-05 11:28:07,604 | INFO     | [monitor] control thread has ended
[2025-06-05 13:28:12] 2025-06-05 11:28:12,181 | INFO     | all workflow threads have been joined
[2025-06-05 13:28:12] 2025-06-05 11:28:12,181 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:28:12] 2025-06-05 11:28:12,181 | INFO     | traces error code: 0
[2025-06-05 13:28:12] 2025-06-05 11:28:12,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:28:12] 2025-06-05 11:28:12,312 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:28:12] 2025-06-05 11:28:12,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:28:12] 2025-06-05 11:28:12,320 [wrapper] pilotpid: 3795516
[2025-06-05 13:28:12] 2025-06-05 11:28:12,323 [wrapper] Pilot exit status: 0
[2025-06-05 13:28:12] 2025-06-05 11:28:12,337 [wrapper] pandaids: 6677920908
[2025-06-05 13:28:12] 2025-06-05 11:28:12,477 [wrapper] cleanup supervisor_pilot   51878 3795517
[2025-06-05 13:28:12] 2025-06-05 11:28:12,482 [wrapper] Test setup, not cleaning
[2025-06-05 13:28:12] 2025-06-05 11:28:12,486 [wrapper] apfmon messages muted
[2025-06-05 13:28:12] 2025-06-05 11:28:12,490 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:28:12] 2025-06-05 11:28:12,493 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:28:12]  *** Error codes and diagnostics ***
[2025-06-05 13:28:12]     "exeErrorCode": 0,
[2025-06-05 13:28:12]     "exeErrorDiag": "",
[2025-06-05 13:28:12]     "pilotErrorCode": 0,
[2025-06-05 13:28:12]     "pilotErrorDiag": "",
[2025-06-05 13:28:12]  *** Listing of results directory ***
[2025-06-05 13:28:12] total 384288
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:32 queuedata.json
[2025-06-05 13:28:12] -rwx------ 1 boinc boinc     37140 Jun  3 20:33 runpilot2-wrapper.sh
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc       100 Jun  5 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:28:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 11:12 run_atlas
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc       105 Jun  5 11:12 job.xml
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc      6686 Jun  5 11:12 init_data.xml
[2025-06-05 13:28:12] -rw-r--r-- 2 boinc boinc 213131022 Jun  5 11:12 EVNT.45006593._001701.pool.root.1
[2025-06-05 13:28:12] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:12 start_atlas.sh
[2025-06-05 13:28:12] drwxrwx--x 2 boinc boinc      4096 Jun  5 11:12 shared
[2025-06-05 13:28:12] -rw-r--r-- 2 boinc boinc    508879 Jun  5 11:12 input.tar.gz
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc         0 Jun  5 11:12 boinc_lockfile
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc      2525 Jun  5 11:12 pandaJob.out
[2025-06-05 13:28:12] -rw------- 1 boinc boinc    983281 Jun  5 11:13 agis_schedconf.cvmfs.json
[2025-06-05 13:28:12] -rw------- 1 boinc boinc   1598969 Jun  5 11:13 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:28:12] drwx------ 4 boinc boinc      4096 Jun  5 11:13 pilot3
[2025-06-05 13:28:12] -rw------- 1 boinc boinc 174438510 Jun  5 13:27 HITS.45006595._042418.pool.root.1
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc       529 Jun  5 13:27 boinc_task_state.xml
[2025-06-05 13:28:12] -rw------- 1 boinc boinc        95 Jun  5 13:27 pilot_heartbeat.json
[2025-06-05 13:28:12] -rw------- 1 boinc boinc      1028 Jun  5 13:27 memory_monitor_summary.json
[2025-06-05 13:28:12] -rw------- 1 boinc boinc    289170 Jun  5 13:27 log.45006595._042418.job.log.tgz.1
[2025-06-05 13:28:12] -rw------- 1 boinc boinc      7695 Jun  5 13:27 heartbeat.json
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:28 boinc_mmap_file
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc        26 Jun  5 13:28 wrapper_checkpoint.txt
[2025-06-05 13:28:12] -rw------- 1 boinc boinc      4364 Jun  5 13:28 pilotlog.txt
[2025-06-05 13:28:12] -rw------- 1 boinc boinc    765413 Jun  5 13:28 log.45006595._042418.job.log.1
[2025-06-05 13:28:12] -rw------- 1 boinc boinc       357 Jun  5 13:28 output.list
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:28 runtime_log
[2025-06-05 13:28:12] -rw------- 1 boinc boinc   1075200 Jun  5 13:28 result.tar.gz
[2025-06-05 13:28:12] -rw------- 1 boinc boinc       662 Jun  5 13:28 GfKLDmadlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQjlKDm51G8gm.diag
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc      9025 Jun  5 13:28 runtime_log.err
[2025-06-05 13:28:12] -rw-r--r-- 1 boinc boinc     20597 Jun  5 13:28 stderr.txt
[2025-06-05 13:28:12] HITS file was successfully produced:
[2025-06-05 13:28:12] -rw------- 1 boinc boinc 174438510 Jun  5 13:27 shared/HITS.pool.root.1
[2025-06-05 13:28:12]  *** Contents of shared directory: ***
[2025-06-05 13:28:12] total 380064
[2025-06-05 13:28:12] -rw-r--r-- 2 boinc boinc 213131022 Jun  5 11:12 ATLAS.root_0
[2025-06-05 13:28:12] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:12 start_atlas.sh
[2025-06-05 13:28:12] -rw-r--r-- 2 boinc boinc    508879 Jun  5 11:12 input.tar.gz
[2025-06-05 13:28:12] -rw------- 1 boinc boinc 174438510 Jun  5 13:27 HITS.pool.root.1
[2025-06-05 13:28:12] -rw------- 1 boinc boinc   1075200 Jun  5 13:28 result.tar.gz
13:28:14 (3791611): run_atlas exited; CPU time 30521.765586
13:28:14 (3791611): called boinc_finish(0)

</stderr_txt>
]]>

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