Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:05:18 (3854947): wrapper (7.7.26015): starting
18:05:18 (3854947): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:05:18] Arguments: --nthreads 8
[2025-06-03 18:05:18] Threads: 8
[2025-06-03 18:05:18] Checking for CVMFS
[2025-06-03 18:05:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:05:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:05:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:05:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:05:18] 2.12.6.0 8406 36449 397644 146757 2 266 22167774 32935937 9335 16776704 1 314227077 99.643 286434740 22707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:05:18] CVMFS is ok
[2025-06-03 18:05:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:05:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:05:18] Further information can be found at the LHC@home message board.
[2025-06-03 18:05:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:05:18] Checking for apptainer binary...
[2025-06-03 18:05:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:05:18] Running /usr/bin/apptainer --version
[2025-06-03 18:05:18] apptainer version 1.4.1-1.el9
[2025-06-03 18:05:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:05:18] c7-16-9.aglt2.org
[2025-06-03 18:05:18] apptainer works
[2025-06-03 18:05:18] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:05:18] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:05:18] Starting ATLAS job with PandaID=6677920729
[2025-06-03 18:05:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:51:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:51:55]  is_altstaged=None
[2025-06-03 18:51:55]  is_tar=False
[2025-06-03 18:51:55]  lfn=log.45006595._042239.job.log.tgz.1
[2025-06-03 18:51:55]  mtime=0
[2025-06-03 18:51:55]  protocol_id=None
[2025-06-03 18:51:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:51:55]  replicas=None
[2025-06-03 18:51:55]  scope=mc23_13p6TeV
[2025-06-03 18:51:55]  status=None
[2025-06-03 18:51:55]  status_code=0
[2025-06-03 18:51:55]  storage_token=
[2025-06-03 18:51:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677920729/log.45006595._042239.job.log.tgz.1
[2025-06-03 18:51:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/4e/log.45006595._042239.job.log.tgz.1
[2025-06-03 18:51:55]  workdir=None
[2025-06-03 18:51:55] ]
[2025-06-03 18:51:55] 2025-06-03 22:51:33,521 | INFO     | transferring file log.45006595._042239.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677920729/log.45006595._042239.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:51:55] 2025-06-03 22:51:33,521 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677920729/log.45006595._042239.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._042239.job
[2025-06-03 18:51:55] 2025-06-03 22:51:33,536 | INFO     | adding to output.list: log.45006595._042239.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/4e/log.45006595._042239.job.log.tg
[2025-06-03 18:51:55] 2025-06-03 22:51:33,536 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:51:55] 2025-06-03 22:51:33,536 | INFO     | summary of transferred files:
[2025-06-03 18:51:55] 2025-06-03 22:51:33,537 | INFO     |  -- lfn=log.45006595._042239.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:51:55] 2025-06-03 22:51:33,537 | INFO     | stage-out finished correctly
[2025-06-03 18:51:55] 2025-06-03 22:51:33,577 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:51:55] 2025-06-03 22:51:33,709 | INFO     | number of running child processes to parent process 3869415: 1
[2025-06-03 18:51:55] 2025-06-03 22:51:33,709 | INFO     | maximum number of monitored processes: 6
[2025-06-03 18:51:55] 2025-06-03 22:51:36,175 | INFO     | PID=3858618 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 18:51:55] 2025-06-03 22:51:36,175 | INFO     | .. there are 15 such processes running
[2025-06-03 18:51:55] 2025-06-03 22:51:36,212 | INFO     | monitor loop #206: job 0:6677920729 is in state 'finished'
[2025-06-03 18:51:55] 2025-06-03 22:51:36,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:51:55] 2025-06-03 22:51:36,308 | INFO     | job 6677920729 has state=finished
[2025-06-03 18:51:55] 2025-06-03 22:51:36,308 | INFO     | preparing for final server update for job 6677920729 in state='finished'
[2025-06-03 18:51:55] 2025-06-03 22:51:36,425 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 18:51:55] 2025-06-03 22:51:36,425 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:51:55] 2025-06-03 22:51:36,425 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:51:55] 2025-06-03 22:51:36,425 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:51:55] 2025-06-03 22:51:36,425 | INFO     | job 6677920729 has finished - writing final server update
[2025-06-03 18:51:55] 2025-06-03 22:51:36,425 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:51:55] 2025-06-03 22:51:36,442 | INFO     | executing command: lscpu
[2025-06-03 18:51:55] 2025-06-03 22:51:36,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:51:55] 2025-06-03 22:51:38,716 | INFO     | monitor loop #207: job 0:6677920729 is in state 'finished'
[2025-06-03 18:51:55] 2025-06-03 22:51:38,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:51:55] 2025-06-03 22:51:39,393 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:51:55] 2025-06-03 22:51:39,394 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677920729/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:51:55] 2025-06-03 22:51:39,394 | INFO     | extracted standard info from prmon json
[2025-06-03 18:51:55] 2025-06-03 22:51:39,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:51:55] 2025-06-03 22:51:39,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:51:55] 2025-06-03 22:51:39,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:51:55] 2025-06-03 22:51:39,395 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:51:55] 2025-06-03 22:51:39,395 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | sum of square deviations: 17003109.5
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | sum of deviations: 3744129461.5
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | mean x: 1748989783.5
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | mean y: 2100767.1315789474
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | -- intersect: -385130052634.8598
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | intersect: -385130052634.8598
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | chi2: 0.7194271029629733
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | -- intersect: -385130052634.8598
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | current memory leak: 220.20 B/s (using 38 data points, chi2=0.72)
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | ..............................
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | . Timing measurements:
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | . get job = 0 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,396 | INFO     | . initial setup = 2 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,397 | INFO     | . payload setup = 5 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,397 | INFO     | . stage-in = 0 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,397 | INFO     | . payload execution = 2742 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,397 | INFO     | . stage-out = 0 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,397 | INFO     | . log creation = 0 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,397 | INFO     | ..............................
[2025-06-03 18:51:55] 2025-06-03 22:51:39,439 | INFO     | 
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | job summary report
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | --------------------------------------------------
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | PanDA job id: 6677920729
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | task id: 45006595
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | errors: (none)
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | pilot state: finished 
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | transexitcode: 0
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | exeerrorcode: 0
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | exeerrordiag: 
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | exitcode: 0
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | exitmsg: OK
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | cpuconsumptiontime: 17585 s
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | nevents: 400
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | neventsw: 0
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | pid: 3869415
[2025-06-03 18:51:55] 2025-06-03 22:51:39,440 | INFO     | pgrp: 3869415
[2025-06-03 18:51:55] 2025-06-03 22:51:39,441 | INFO     | corecount: 8
[2025-06-03 18:51:55] 2025-06-03 22:51:39,441 | INFO     | event service: False
[2025-06-03 18:51:55] 2025-06-03 22:51:39,441 | INFO     | sizes: {0: 2404957, 1: 2405212, 4: 2405418, 11: 2405446, 2750: 2430673, 2751: 2430672, 2753: 2439853, 2758: 2439967}
[2025-06-03 18:51:55] 2025-06-03 22:51:39,441 | INFO     | --------------------------------------------------
[2025-06-03 18:51:55] 2025-06-03 22:51:39,441 | INFO     | 
[2025-06-03 18:51:55] 2025-06-03 22:51:39,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 18:51:55] 2025-06-03 22:51:39,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:51:55] 2025-06-03 22:51:39,462 | INFO     | job 6677920729 has completed (purged errors)
[2025-06-03 18:51:55] 2025-06-03 22:51:39,463 | INFO     | overall cleanup function is called
[2025-06-03 18:51:55] 2025-06-03 22:51:40,470 | INFO     | --- collectZombieJob: --- 10, [3869415]
[2025-06-03 18:51:55] 2025-06-03 22:51:40,470 | INFO     | zombie collector waiting for pid 3869415
[2025-06-03 18:51:55] 2025-06-03 22:51:40,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:51:55] 2025-06-03 22:51:40,470 | INFO     | collected zombie processes
[2025-06-03 18:51:55] 2025-06-03 22:51:40,471 | INFO     | will attempt to kill all subprocesses of pid=3869415
[2025-06-03 18:51:55] 2025-06-03 22:51:40,718 | INFO     | process IDs to be killed: [3869415] (in reverse order)
[2025-06-03 18:51:55] 2025-06-03 22:51:40,795 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:51:55] 2025-06-03 22:51:40,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:51:55] 2025-06-03 22:51:40,805 | INFO     | did not find any defunct processes belonging to 3869415
[2025-06-03 18:51:55] 2025-06-03 22:51:40,812 | INFO     | did not find any defunct processes belonging to 3869415
[2025-06-03 18:51:55] 2025-06-03 22:51:40,813 | INFO     | ready for new job
[2025-06-03 18:51:55] 2025-06-03 22:51:40,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:51:55] 2025-06-03 22:51:40,813 | INFO     | **************************************
[2025-06-03 18:51:55] 2025-06-03 22:51:40,814 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:51:55] 2025-06-03 22:51:40,814 | INFO     | **************************************
[2025-06-03 18:51:55] 2025-06-03 22:51:40,814 | INFO     | 
[2025-06-03 18:51:55] 2025-06-03 22:51:40,830 | INFO     | architecture information:
[2025-06-03 18:51:55] 2025-06-03 22:51:40,830 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:51:55] 2025-06-03 22:51:40,846 | INFO     | cat /etc/os-release:
[2025-06-03 18:51:55] NAME="CentOS Linux"
[2025-06-03 18:51:55] VERSION="7 (Core)"
[2025-06-03 18:51:55] ID="centos"
[2025-06-03 18:51:55] ID_LIKE="rhel fedora"
[2025-06-03 18:51:55] VERSION_ID="7"
[2025-06-03 18:51:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:51:55] ANSI_COLOR="0;31"
[2025-06-03 18:51:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:51:55] HOME_URL="https://www.centos.org/"
[2025-06-03 18:51:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:51:55] 
[2025-06-03 18:51:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:51:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:51:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:51:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:51:55] 
[2025-06-03 18:51:55] 2025-06-03 22:51:40,847 | INFO     | **************************************
[2025-06-03 18:51:55] 2025-06-03 22:51:41,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 18:51:55] 2025-06-03 22:51:41,364 | INFO     | sufficient remaining disk space (75440848896 B)
[2025-06-03 18:51:55] 2025-06-03 22:51:41,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:51:55] 2025-06-03 22:51:41,365 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:51:55] 2025-06-03 22:51:41,365 | INFO     | update_server=False
[2025-06-03 18:51:55] 2025-06-03 22:51:41,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:51:55] 2025-06-03 22:51:41,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:51:55] 2025-06-03 22:51:41,521 | INFO     | all job control threads have been joined
[2025-06-03 18:51:55] 2025-06-03 22:51:41,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:51:55] 2025-06-03 22:51:42,191 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:51:55] 2025-06-03 22:51:42,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:51:55] 2025-06-03 22:51:42,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:51:55] 2025-06-03 22:51:42,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:51:55] 2025-06-03 22:51:42,221 | INFO     | aborting loop
[2025-06-03 18:51:55] 2025-06-03 22:51:42,370 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:42,371 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:42,461 | INFO     | all data control threads have been joined
[2025-06-03 18:51:55] 2025-06-03 22:51:42,526 | INFO     | [job] control thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:42,695 | INFO     | [job] validate thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:42,708 | INFO     | all payload control threads have been joined
[2025-06-03 18:51:55] 2025-06-03 22:51:42,818 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:42,916 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:42,984 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,161 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,226 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,340 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,465 | INFO     | [data] control thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,593 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,714 | INFO     | [payload] control thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:43,906 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:44,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:51:55] 2025-06-03 22:51:48,135 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:51:55] 2025-06-03 22:51:50,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269965256512)>', '<ExcThread(monitor, started 140269328525056)>']
[2025-06-03 18:51:55] 2025-06-03 22:51:50,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:51:55] 2025-06-03 22:51:50,224 | INFO     | [monitor] control thread has ended
[2025-06-03 18:51:55] 2025-06-03 22:51:55,211 | INFO     | all workflow threads have been joined
[2025-06-03 18:51:55] 2025-06-03 22:51:55,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:51:55] 2025-06-03 22:51:55,211 | INFO     | traces error code: 0
[2025-06-03 18:51:55] 2025-06-03 22:51:55,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:51:55] 2025-06-03 22:51:55,299 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:51:55] 2025-06-03 22:51:55,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:51:55] 2025-06-03 22:51:55,303 [wrapper] pilotpid: 3858618
[2025-06-03 18:51:55] 2025-06-03 22:51:55,305 [wrapper] Pilot exit status: 0
[2025-06-03 18:51:55] 2025-06-03 22:51:55,312 [wrapper] pandaids: 6677920729
[2025-06-03 18:51:55] 2025-06-03 22:51:55,367 [wrapper] cleanup supervisor_pilot 3982058 3858619
[2025-06-03 18:51:55] 2025-06-03 22:51:55,369 [wrapper] Test setup, not cleaning
[2025-06-03 18:51:55] 2025-06-03 22:51:55,371 [wrapper] apfmon messages muted
[2025-06-03 18:51:55] 2025-06-03 22:51:55,372 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:51:55] 2025-06-03 22:51:55,374 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:51:55]  *** Error codes and diagnostics ***
[2025-06-03 18:51:55]     "exeErrorCode": 0,
[2025-06-03 18:51:55]     "exeErrorDiag": "",
[2025-06-03 18:51:55]     "pilotErrorCode": 0,
[2025-06-03 18:51:55]     "pilotErrorDiag": "",
[2025-06-03 18:51:55]  *** Listing of results directory ***
[2025-06-03 18:51:55] total 389404
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 18:51:55] -rwx------. 1 boincer umatlas     37140 Jun  3 14:30 runpilot2-wrapper.sh
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 14:30 queuedata.json
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:51:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:05 run_atlas
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:05 job.xml
[2025-06-03 18:51:55] -rw-r--r--. 2 boincer umatlas 215772908 Jun  3 18:05 EVNT.45006593._001694.pool.root.1
[2025-06-03 18:51:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:05 start_atlas.sh
[2025-06-03 18:51:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:05 shared
[2025-06-03 18:51:55] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 18:05 input.tar.gz
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:05 boinc_lockfile
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 18:05 pandaJob.out
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas    986869 Jun  3 18:05 agis_schedconf.cvmfs.json
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 18:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:51:55] drwx------. 4 boincer umatlas      4096 Jun  3 18:05 pilot3
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas      6933 Jun  3 18:45 init_data.xml
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas 177978098 Jun  3 18:51 HITS.45006595._042239.pool.root.1
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas       529 Jun  3 18:51 boinc_task_state.xml
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas        95 Jun  3 18:51 pilot_heartbeat.json
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas      1019 Jun  3 18:51 memory_monitor_summary.json
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas    290269 Jun  3 18:51 log.45006595._042239.job.log.tgz.1
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas      7674 Jun  3 18:51 heartbeat.json
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:51 boinc_mmap_file
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:51 wrapper_checkpoint.txt
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas      4353 Jun  3 18:51 pilotlog.txt
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas    291930 Jun  3 18:51 log.45006595._042239.job.log.1
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas       357 Jun  3 18:51 output.list
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:51 runtime_log
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas    604160 Jun  3 18:51 result.tar.gz
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 18:51 runtime_log.err
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas       649 Jun  3 18:51 PUsKDmKalg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjZZKDmuYs9nm.diag
[2025-06-03 18:51:55] -rw-r--r--. 1 boincer umatlas     21462 Jun  3 18:51 stderr.txt
[2025-06-03 18:51:55] HITS file was successfully produced:
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas 177978098 Jun  3 18:51 shared/HITS.pool.root.1
[2025-06-03 18:51:55]  *** Contents of shared directory: ***
[2025-06-03 18:51:55] total 385636
[2025-06-03 18:51:55] -rw-r--r--. 2 boincer umatlas 215772908 Jun  3 18:05 ATLAS.root_0
[2025-06-03 18:51:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:05 start_atlas.sh
[2025-06-03 18:51:55] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 18:05 input.tar.gz
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas 177978098 Jun  3 18:51 HITS.pool.root.1
[2025-06-03 18:51:55] -rw-------. 1 boincer umatlas    604160 Jun  3 18:51 result.tar.gz
18:51:56 (3854947): run_atlas exited; CPU time 17659.501461
18:51:56 (3854947): called boinc_finish(0)

</stderr_txt>
]]>

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