Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:13 (11939): wrapper (7.7.26015): starting
18:07:13 (11939): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 18:07:13] Arguments: --nthreads 12
[2025-06-03 18:07:13] Threads: 12
[2025-06-03 18:07:13] Checking for CVMFS
[2025-06-03 18:07:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:07:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:07:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:07:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:07:13] 2.11.2.0 2933 34821 86228 146758 3 8 17923197 20275200 1 130560 0 14963296 99.982 6060347 7455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 18:07:13] CVMFS is ok
[2025-06-03 18:07:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:07:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:07:13] Further information can be found at the LHC@home message board.
[2025-06-03 18:07:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:07:13] Checking for apptainer binary...
[2025-06-03 18:07:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:07:13] Running /usr/bin/apptainer --version
[2025-06-03 18:07:13] apptainer version 1.3.2-1.el7
[2025-06-03 18:07:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:07:14] c-205-15.aglt2.org
[2025-06-03 18:07:14] apptainer works
[2025-06-03 18:07:14] Set ATHENA_PROC_NUMBER=12
[2025-06-03 18:07:14] Set ATHENA_CORE_NUMBER=12
[2025-06-03 18:07:15] Starting ATLAS job with PandaID=6677920666
[2025-06-03 18:07:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:14:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:14:09]  filesize=369197
[2025-06-03 19:14:09]  filetype=log
[2025-06-03 19:14:09]  guid=235571ad-8ae7-4d80-a9cf-a73d8960605b
[2025-06-03 19:14:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 19:14:09]  is_altstaged=None
[2025-06-03 19:14:09]  is_tar=False
[2025-06-03 19:14:09]  lfn=log.45006595._042218.job.log.tgz.1
[2025-06-03 19:14:09]  mtime=0
[2025-06-03 19:14:09]  protocol_id=None
[2025-06-03 19:14:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 19:14:09]  replicas=None
[2025-06-03 19:14:09]  scope=mc23_13p6TeV
[2025-06-03 19:14:09]  status=None
[2025-06-03 19:14:09]  status_code=0
[2025-06-03 19:14:09]  storage_token=
[2025-06-03 19:14:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677920666/log.45006595._042218.job.log.tgz.1
[2025-06-03 19:14:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/81/log.45006595._042218.job.log.tgz.1
[2025-06-03 19:14:09]  workdir=None
[2025-06-03 19:14:09] ]
[2025-06-03 19:14:09] 2025-06-03 23:13:47,853 | INFO     | transferring file log.45006595._042218.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677920666/log.45006595._042218.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 19:14:09] 2025-06-03 23:13:47,853 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677920666/log.45006595._042218.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._042218.job
[2025-06-03 19:14:09] 2025-06-03 23:13:47,875 | INFO     | adding to output.list: log.45006595._042218.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/81/log.45006595._042218.job.log.tg
[2025-06-03 19:14:09] 2025-06-03 23:13:47,876 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 19:14:09] 2025-06-03 23:13:47,876 | INFO     | summary of transferred files:
[2025-06-03 19:14:09] 2025-06-03 23:13:47,876 | INFO     |  -- lfn=log.45006595._042218.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 19:14:09] 2025-06-03 23:13:47,877 | INFO     | stage-out finished correctly
[2025-06-03 19:14:09] 2025-06-03 23:13:47,961 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 19:14:09] 2025-06-03 23:13:49,043 | INFO     | job 6677920666 has state=finished
[2025-06-03 19:14:09] 2025-06-03 23:13:49,043 | INFO     | preparing for final server update for job 6677920666 in state='finished'
[2025-06-03 19:14:09] 2025-06-03 23:13:49,044 | INFO     | this job has now completed (state=finished)
[2025-06-03 19:14:09] 2025-06-03 23:13:49,044 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 19:14:09] 2025-06-03 23:13:49,044 | INFO     | log transfer has been attempted: DONE
[2025-06-03 19:14:09] 2025-06-03 23:13:49,044 | INFO     | job 6677920666 has finished - writing final server update
[2025-06-03 19:14:09] 2025-06-03 23:13:49,045 | INFO     | total number of processed events: 400 (read)
[2025-06-03 19:14:09] 2025-06-03 23:13:49,046 | INFO     | executing command: lscpu
[2025-06-03 19:14:09] 2025-06-03 23:13:49,073 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 19:14:09] 2025-06-03 23:13:52,092 | WARNING  | process 21950 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 19:14:09] 2025-06-03 23:13:52,092 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677920666/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:14:09] 2025-06-03 23:13:52,181 | INFO     | number of running child processes to parent process 21950: 1
[2025-06-03 19:14:09] 2025-06-03 23:13:52,181 | INFO     | maximum number of monitored processes: 6
[2025-06-03 19:14:09] 2025-06-03 23:13:53,678 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 19:14:09] 2025-06-03 23:13:53,678 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677920666/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:14:09] 2025-06-03 23:13:53,679 | INFO     | extracted standard info from prmon json
[2025-06-03 19:14:09] 2025-06-03 23:13:53,679 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:14:09] 2025-06-03 23:13:53,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:14:09] 2025-06-03 23:13:53,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:14:09] 2025-06-03 23:13:53,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:14:09] 2025-06-03 23:13:53,682 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:14:09] 2025-06-03 23:13:53,683 | INFO     | sum of square deviations: 60482994.5
[2025-06-03 19:14:09] 2025-06-03 23:13:53,683 | INFO     | sum of deviations: 1550262448.5000005
[2025-06-03 19:14:09] 2025-06-03 23:13:53,683 | INFO     | mean x: 1748990522.5
[2025-06-03 19:14:09] 2025-06-03 23:13:53,683 | INFO     | mean y: 2650976.5344827585
[2025-06-03 19:14:09] 2025-06-03 23:13:53,684 | INFO     | -- intersect: -44826384890.96287
[2025-06-03 19:14:09] 2025-06-03 23:13:53,684 | INFO     | intersect: -44826384890.96287
[2025-06-03 19:14:09] 2025-06-03 23:13:53,684 | INFO     | chi2: 0.027913699660689215
[2025-06-03 19:14:09] 2025-06-03 23:13:53,684 | INFO     | -- intersect: -44826384890.96287
[2025-06-03 19:14:09] 2025-06-03 23:13:53,685 | INFO     | current memory leak: 25.63 B/s (using 58 data points, chi2=0.03)
[2025-06-03 19:14:09] 2025-06-03 23:13:53,685 | INFO     | ..............................
[2025-06-03 19:14:09] 2025-06-03 23:13:53,685 | INFO     | . Timing measurements:
[2025-06-03 19:14:09] 2025-06-03 23:13:53,685 | INFO     | . get job = 0 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,685 | INFO     | . initial setup = 2 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,685 | INFO     | . payload setup = 9 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,686 | INFO     | . stage-in = 0 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,686 | INFO     | . payload execution = 3948 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,686 | INFO     | . stage-out = 0 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,686 | INFO     | . log creation = 0 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,686 | INFO     | ..............................
[2025-06-03 19:14:09] 2025-06-03 23:13:53,770 | INFO     | 
[2025-06-03 19:14:09] 2025-06-03 23:13:53,770 | INFO     | job summary report
[2025-06-03 19:14:09] 2025-06-03 23:13:53,771 | INFO     | --------------------------------------------------
[2025-06-03 19:14:09] 2025-06-03 23:13:53,771 | INFO     | PanDA job id: 6677920666
[2025-06-03 19:14:09] 2025-06-03 23:13:53,771 | INFO     | task id: 45006595
[2025-06-03 19:14:09] 2025-06-03 23:13:53,771 | INFO     | errors: (none)
[2025-06-03 19:14:09] 2025-06-03 23:13:53,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:14:09] 2025-06-03 23:13:53,771 | INFO     | pilot state: finished 
[2025-06-03 19:14:09] 2025-06-03 23:13:53,772 | INFO     | transexitcode: 0
[2025-06-03 19:14:09] 2025-06-03 23:13:53,772 | INFO     | exeerrorcode: 0
[2025-06-03 19:14:09] 2025-06-03 23:13:53,772 | INFO     | exeerrordiag: 
[2025-06-03 19:14:09] 2025-06-03 23:13:53,772 | INFO     | exitcode: 0
[2025-06-03 19:14:09] 2025-06-03 23:13:53,772 | INFO     | exitmsg: OK
[2025-06-03 19:14:09] 2025-06-03 23:13:53,772 | INFO     | cpuconsumptiontime: 42138 s
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | nevents: 400
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | neventsw: 0
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | pid: 21950
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | pgrp: 21950
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | corecount: 12
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | event service: False
[2025-06-03 19:14:09] 2025-06-03 23:13:53,773 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 3962: 2431158, 3964: 2440283, 3970: 2440397}
[2025-06-03 19:14:09] 2025-06-03 23:13:53,774 | INFO     | --------------------------------------------------
[2025-06-03 19:14:09] 2025-06-03 23:13:53,774 | INFO     | 
[2025-06-03 19:14:09] 2025-06-03 23:13:53,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 19:14:09] 2025-06-03 23:13:53,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,798 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,798 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,798 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:14:09] 2025-06-03 23:13:53,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:14:09] 2025-06-03 23:13:53,801 | INFO     | job 6677920666 has completed (purged errors)
[2025-06-03 19:14:09] 2025-06-03 23:13:53,801 | INFO     | overall cleanup function is called
[2025-06-03 19:14:09] 2025-06-03 23:13:54,806 | INFO     | --- collectZombieJob: --- 10, [21950]
[2025-06-03 19:14:09] 2025-06-03 23:13:54,806 | INFO     | zombie collector waiting for pid 21950
[2025-06-03 19:14:09] 2025-06-03 23:13:54,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:14:09] 2025-06-03 23:13:54,806 | INFO     | collected zombie processes
[2025-06-03 19:14:09] 2025-06-03 23:13:54,806 | INFO     | will attempt to kill all subprocesses of pid=21950
[2025-06-03 19:14:09] 2025-06-03 23:13:54,900 | INFO     | process IDs to be killed: [21950] (in reverse order)
[2025-06-03 19:14:09] 2025-06-03 23:13:54,953 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:14:09] 2025-06-03 23:13:54,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:14:09] 2025-06-03 23:13:54,957 | INFO     | did not find any defunct processes belonging to 21950
[2025-06-03 19:14:09] 2025-06-03 23:13:54,960 | INFO     | did not find any defunct processes belonging to 21950
[2025-06-03 19:14:09] 2025-06-03 23:13:54,960 | INFO     | ready for new job
[2025-06-03 19:14:09] 2025-06-03 23:13:54,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:14:09] 2025-06-03 23:13:54,962 | INFO     | **************************************
[2025-06-03 19:14:09] 2025-06-03 23:13:54,962 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:14:09] 2025-06-03 23:13:54,962 | INFO     | **************************************
[2025-06-03 19:14:09] 2025-06-03 23:13:54,962 | INFO     | 
[2025-06-03 19:14:09] 2025-06-03 23:13:54,963 | INFO     | architecture information:
[2025-06-03 19:14:09] 2025-06-03 23:13:54,963 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:14:09] 2025-06-03 23:13:54,980 | INFO     | cat /etc/os-release:
[2025-06-03 19:14:09] NAME="CentOS Linux"
[2025-06-03 19:14:09] VERSION="7 (Core)"
[2025-06-03 19:14:09] ID="centos"
[2025-06-03 19:14:09] ID_LIKE="rhel fedora"
[2025-06-03 19:14:09] VERSION_ID="7"
[2025-06-03 19:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:14:09] ANSI_COLOR="0;31"
[2025-06-03 19:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:14:09] HOME_URL="https://www.centos.org/"
[2025-06-03 19:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:14:09] 
[2025-06-03 19:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:14:09] 
[2025-06-03 19:14:09] 2025-06-03 23:13:54,981 | INFO     | **************************************
[2025-06-03 19:14:09] 2025-06-03 23:13:55,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 19:14:09] 2025-06-03 23:13:55,501 | INFO     | sufficient remaining disk space (29419896832 B)
[2025-06-03 19:14:09] 2025-06-03 23:13:55,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:14:09] 2025-06-03 23:13:55,502 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:14:09] 2025-06-03 23:13:55,502 | INFO     | update_server=False
[2025-06-03 19:14:09] 2025-06-03 23:13:55,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:14:09] 2025-06-03 23:13:55,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:14:09] 2025-06-03 23:13:55,502 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:14:09] 2025-06-03 23:13:55,503 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:14:09] 2025-06-03 23:13:55,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:14:09] 2025-06-03 23:13:55,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:14:09] 2025-06-03 23:13:55,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:14:09] 2025-06-03 23:13:55,687 | INFO     | aborting loop
[2025-06-03 19:14:09] 2025-06-03 23:13:55,936 | INFO     | all payload control threads have been joined
[2025-06-03 19:14:09] 2025-06-03 23:13:55,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:14:09] 2025-06-03 23:13:56,404 | INFO     | all job control threads have been joined
[2025-06-03 19:14:09] 2025-06-03 23:13:56,409 | INFO     | all data control threads have been joined
[2025-06-03 19:14:09] 2025-06-03 23:13:56,506 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,507 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,583 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,631 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,670 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,692 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,869 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:56,941 | INFO     | [payload] control thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:57,224 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:57,267 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:57,406 | INFO     | [job] control thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:57,411 | INFO     | [data] control thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:57,778 | INFO     | [job] validate thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:57,971 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:13:58,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:14:09] 2025-06-03 23:14:02,558 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:14:09] 2025-06-03 23:14:04,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359437428544)>', '<ExcThread(monitor, started 140358826571520)>']
[2025-06-03 19:14:09] 2025-06-03 23:14:04,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:14:09] 2025-06-03 23:14:04,550 | INFO     | [monitor] control thread has ended
[2025-06-03 19:14:09] 2025-06-03 23:14:09,290 | INFO     | all workflow threads have been joined
[2025-06-03 19:14:09] 2025-06-03 23:14:09,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:14:09] 2025-06-03 23:14:09,290 | INFO     | traces error code: 0
[2025-06-03 19:14:09] 2025-06-03 23:14:09,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:14:09] 2025-06-03 23:14:09,374 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:14:09] 2025-06-03 23:14:09,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:14:09] 2025-06-03 23:14:09,382 [wrapper] pilotpid: 15523
[2025-06-03 19:14:09] 2025-06-03 23:14:09,385 [wrapper] Pilot exit status: 0
[2025-06-03 19:14:09] 2025-06-03 23:14:09,401 [wrapper] pandaids: 6677920666
[2025-06-03 19:14:09] 2025-06-03 23:14:09,440 [wrapper] cleanup supervisor_pilot 25611 15524
[2025-06-03 19:14:09] 2025-06-03 23:14:09,444 [wrapper] Test setup, not cleaning
[2025-06-03 19:14:09] 2025-06-03 23:14:09,448 [wrapper] apfmon messages muted
[2025-06-03 19:14:09] 2025-06-03 23:14:09,452 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:14:09] 2025-06-03 23:14:09,456 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:14:09]  *** Error codes and diagnostics ***
[2025-06-03 19:14:09]     "exeErrorCode": 0,
[2025-06-03 19:14:09]     "exeErrorDiag": "",
[2025-06-03 19:14:09]     "pilotErrorCode": 0,
[2025-06-03 19:14:09]     "pilotErrorDiag": "",
[2025-06-03 19:14:09]  *** Listing of results directory ***
[2025-06-03 19:14:09] total 390504
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 14:30 queuedata.json
[2025-06-03 19:14:09] -rwx------ 1 boincer umatlas     37140 Jun  3 14:30 runpilot2-wrapper.sh
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas       100 Jun  3 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:14:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 18:07 run_atlas
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas       105 Jun  3 18:07 job.xml
[2025-06-03 19:14:09] -rw-r--r-- 2 boincer umatlas 213426457 Jun  3 18:07 EVNT.45006593._001693.pool.root.1
[2025-06-03 19:14:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:07 start_atlas.sh
[2025-06-03 19:14:09] drwxrwx--x 2 boincer umatlas      4096 Jun  3 18:07 shared
[2025-06-03 19:14:09] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 18:07 input.tar.gz
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas         0 Jun  3 18:07 boinc_lockfile
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 18:07 pandaJob.out
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas    986869 Jun  3 18:07 agis_schedconf.cvmfs.json
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas   1603667 Jun  3 18:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:14:09] drwx------ 4 boincer umatlas      4096 Jun  3 18:07 pilot3
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 19:11 init_data.xml
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas 181098750 Jun  3 19:13 HITS.45006595._042218.pool.root.1
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas        95 Jun  3 19:13 pilot_heartbeat.json
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 19:13 boinc_mmap_file
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas        27 Jun  3 19:13 wrapper_checkpoint.txt
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas       529 Jun  3 19:13 boinc_task_state.xml
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas      1049 Jun  3 19:13 memory_monitor_summary.json
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas    369197 Jun  3 19:13 log.45006595._042218.job.log.tgz.1
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas      7752 Jun  3 19:13 heartbeat.json
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas      4476 Jun  3 19:14 pilotlog.txt
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas    387520 Jun  3 19:14 log.45006595._042218.job.log.1
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas       357 Jun  3 19:14 output.list
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas       620 Jun  3 19:14 runtime_log
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas    778240 Jun  3 19:14 result.tar.gz
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 19:14 runtime_log.err
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas       660 Jun  3 19:14 G7FLDmUalg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoglKDmlwtuqm.diag
[2025-06-03 19:14:09] -rw-r--r-- 1 boincer umatlas     21122 Jun  3 19:14 stderr.txt
[2025-06-03 19:14:09] HITS file was successfully produced:
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas 181098750 Jun  3 19:13 shared/HITS.pool.root.1
[2025-06-03 19:14:09]  *** Contents of shared directory: ***
[2025-06-03 19:14:09] total 386564
[2025-06-03 19:14:09] -rw-r--r-- 2 boincer umatlas 213426457 Jun  3 18:07 ATLAS.root_0
[2025-06-03 19:14:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:07 start_atlas.sh
[2025-06-03 19:14:09] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 18:07 input.tar.gz
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas 181098750 Jun  3 19:13 HITS.pool.root.1
[2025-06-03 19:14:09] -rw------- 1 boincer umatlas    778240 Jun  3 19:14 result.tar.gz
19:14:11 (11939): run_atlas exited; CPU time 42121.763161
19:14:11 (11939): called boinc_finish(0)

</stderr_txt>
]]>

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