Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:05:57 (97479): wrapper (7.7.26015): starting
18:05:57 (97479): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:05:57] Arguments: --nthreads 8
[2025-06-03 18:05:57] Threads: 8
[2025-06-03 18:05:57] Checking for CVMFS
[2025-06-03 18:05:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:05:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:05:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:05:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:05:58] 2.11.2.0 72091 262 112324 146757 1 233 11841345 18432000 11980 130560 0 10713245 99.896 1837604 77653 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 18:05:58] CVMFS is ok
[2025-06-03 18:05:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:05:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:05:58] Further information can be found at the LHC@home message board.
[2025-06-03 18:05:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:05:58] Checking for apptainer binary...
[2025-06-03 18:05:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:05:58] Running /usr/bin/apptainer --version
[2025-06-03 18:05:58] apptainer version 1.3.2-1.el7
[2025-06-03 18:05:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:05:58] c-212-4.aglt2.org
[2025-06-03 18:05:58] apptainer works
[2025-06-03 18:05:59] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:05:59] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:05:59] Starting ATLAS job with PandaID=6677920843
[2025-06-03 18:05:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:16:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:16:56]  status_code=0
[2025-06-03 19:16:56]  storage_token=
[2025-06-03 19:16:56]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677920843/log.45006595._042353.job.log.tgz.1
[2025-06-03 19:16:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/da/log.45006595._042353.job.log.tgz.1
[2025-06-03 19:16:56]  workdir=None
[2025-06-03 19:16:56] ]
[2025-06-03 19:16:56] 2025-06-03 23:16:28,227 | INFO     | transferring file log.45006595._042353.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677920843/log.45006595._042353.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 19:16:56] 2025-06-03 23:16:28,227 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677920843/log.45006595._042353.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._042353.job
[2025-06-03 19:16:56] 2025-06-03 23:16:28,272 | INFO     | adding to output.list: log.45006595._042353.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/da/log.45006595._042353.job.log.tg
[2025-06-03 19:16:56] 2025-06-03 23:16:28,272 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 19:16:56] 2025-06-03 23:16:28,273 | INFO     | summary of transferred files:
[2025-06-03 19:16:56] 2025-06-03 23:16:28,273 | INFO     |  -- lfn=log.45006595._042353.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 19:16:56] 2025-06-03 23:16:28,273 | INFO     | stage-out finished correctly
[2025-06-03 19:16:56] 2025-06-03 23:16:28,346 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 19:16:56] 2025-06-03 23:16:30,252 | WARNING  | process 14411 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 19:16:56] 2025-06-03 23:16:30,253 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677920843/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,254 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677920843/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,255 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3057916 B
[2025-06-03 19:16:56] 2025-06-03 23:16:30,255 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15775 B
[2025-06-03 19:16:56] 2025-06-03 23:16:30,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 19:16:56] 2025-06-03 23:16:30,270 | INFO     | sufficient remaining disk space (103948484608 B)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,270 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,270 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6677920843: 3355073 B (within 2537553920 B limit)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,271 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6677920843/HITS.45006595._042353.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,271 | INFO     | total size of present files: 0 B (workdir size: 3355073 B)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,271 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6677920843/HITS.45006595._042353.pool.root.1 since it does not exist
[2025-06-03 19:16:56] 2025-06-03 23:16:30,518 | INFO     | number of running child processes to parent process 14411: 1
[2025-06-03 19:16:56] 2025-06-03 23:16:30,519 | INFO     | maximum number of monitored processes: 6
[2025-06-03 19:16:56] 2025-06-03 23:16:30,684 | INFO     | job 6677920843 has state=finished
[2025-06-03 19:16:56] 2025-06-03 23:16:30,684 | INFO     | preparing for final server update for job 6677920843 in state='finished'
[2025-06-03 19:16:56] 2025-06-03 23:16:30,684 | INFO     | this job has now completed (state=finished)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,685 | INFO     | log transfer has been attempted: DONE
[2025-06-03 19:16:56] 2025-06-03 23:16:30,685 | INFO     | job 6677920843 has finished - writing final server update
[2025-06-03 19:16:56] 2025-06-03 23:16:30,685 | INFO     | total number of processed events: 400 (read)
[2025-06-03 19:16:56] 2025-06-03 23:16:30,689 | INFO     | executing command: lscpu
[2025-06-03 19:16:56] 2025-06-03 23:16:30,772 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 19:16:56] 2025-06-03 23:16:33,027 | INFO     | monitor loop #317: job 0:6677920843 is in state 'finished'
[2025-06-03 19:16:56] 2025-06-03 23:16:33,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:16:56] 2025-06-03 23:16:35,337 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 19:16:56] 2025-06-03 23:16:35,338 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677920843/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:16:56] 2025-06-03 23:16:35,338 | INFO     | extracted standard info from prmon json
[2025-06-03 19:16:56] 2025-06-03 23:16:35,338 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:16:56] 2025-06-03 23:16:35,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:16:56] 2025-06-03 23:16:35,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:16:56] 2025-06-03 23:16:35,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:16:56] 2025-06-03 23:16:35,340 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | sum of square deviations: 73882315.5
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | sum of deviations: 676897876.5
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | mean x: 1748990567.5
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | mean y: 2473359.6612903224
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | -- intersect: -16021496559.89652
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | intersect: -16021496559.89652
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | chi2: 0.0004343636839762009
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | -- intersect: -16021496559.89652
[2025-06-03 19:16:56] 2025-06-03 23:16:35,341 | INFO     | current memory leak: 9.16 B/s (using 62 data points, chi2=0.00)
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | ..............................
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . Timing measurements:
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . get job = 0 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . initial setup = 2 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . payload setup = 8 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . stage-in = 0 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . payload execution = 4188 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . stage-out = 0 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | . log creation = 0 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,342 | INFO     | ..............................
[2025-06-03 19:16:56] 2025-06-03 23:16:35,493 | INFO     | 
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | job summary report
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | --------------------------------------------------
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | PanDA job id: 6677920843
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | task id: 45006595
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | errors: (none)
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | pilot state: finished 
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | transexitcode: 0
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | exeerrorcode: 0
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | exeerrordiag: 
[2025-06-03 19:16:56] 2025-06-03 23:16:35,494 | INFO     | exitcode: 0
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | exitmsg: OK
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | cpuconsumptiontime: 27292 s
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | nevents: 400
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | neventsw: 0
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | pid: 14411
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | pgrp: 14411
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | corecount: 8
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | event service: False
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 4201: 2431302, 4202: 2440427, 4209: 2440569}
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | --------------------------------------------------
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | 
[2025-06-03 19:16:56] 2025-06-03 23:16:35,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | job 6677920843 has completed (purged errors)
[2025-06-03 19:16:56] 2025-06-03 23:16:35,515 | INFO     | overall cleanup function is called
[2025-06-03 19:16:56] 2025-06-03 23:16:36,521 | INFO     | --- collectZombieJob: --- 10, [14411]
[2025-06-03 19:16:56] 2025-06-03 23:16:36,522 | INFO     | zombie collector waiting for pid 14411
[2025-06-03 19:16:56] 2025-06-03 23:16:36,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:16:56] 2025-06-03 23:16:36,522 | INFO     | collected zombie processes
[2025-06-03 19:16:56] 2025-06-03 23:16:36,522 | INFO     | will attempt to kill all subprocesses of pid=14411
[2025-06-03 19:16:56] 2025-06-03 23:16:36,688 | INFO     | process IDs to be killed: [14411] (in reverse order)
[2025-06-03 19:16:56] 2025-06-03 23:16:36,799 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:16:56] 2025-06-03 23:16:36,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:16:56] 2025-06-03 23:16:36,815 | INFO     | did not find any defunct processes belonging to 14411
[2025-06-03 19:16:56] 2025-06-03 23:16:36,831 | INFO     | did not find any defunct processes belonging to 14411
[2025-06-03 19:16:56] 2025-06-03 23:16:36,831 | INFO     | ready for new job
[2025-06-03 19:16:56] 2025-06-03 23:16:36,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:16:56] 2025-06-03 23:16:36,833 | INFO     | **************************************
[2025-06-03 19:16:56] 2025-06-03 23:16:36,833 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:16:56] 2025-06-03 23:16:36,833 | INFO     | **************************************
[2025-06-03 19:16:56] 2025-06-03 23:16:36,833 | INFO     | 
[2025-06-03 19:16:56] 2025-06-03 23:16:36,841 | INFO     | architecture information:
[2025-06-03 19:16:56] 2025-06-03 23:16:36,842 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:16:56] 2025-06-03 23:16:36,856 | INFO     | cat /etc/os-release:
[2025-06-03 19:16:56] NAME="CentOS Linux"
[2025-06-03 19:16:56] VERSION="7 (Core)"
[2025-06-03 19:16:56] ID="centos"
[2025-06-03 19:16:56] ID_LIKE="rhel fedora"
[2025-06-03 19:16:56] VERSION_ID="7"
[2025-06-03 19:16:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:16:56] ANSI_COLOR="0;31"
[2025-06-03 19:16:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:16:56] HOME_URL="https://www.centos.org/"
[2025-06-03 19:16:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:16:56] 
[2025-06-03 19:16:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:16:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:16:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:16:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:16:56] 
[2025-06-03 19:16:56] 2025-06-03 23:16:36,856 | INFO     | **************************************
[2025-06-03 19:16:56] 2025-06-03 23:16:37,359 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 19:16:56] 2025-06-03 23:16:37,387 | INFO     | sufficient remaining disk space (103951630336 B)
[2025-06-03 19:16:56] 2025-06-03 23:16:37,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:16:56] 2025-06-03 23:16:37,387 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:16:56] 2025-06-03 23:16:37,387 | INFO     | update_server=False
[2025-06-03 19:16:56] 2025-06-03 23:16:37,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | INFO     | aborting loop
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:16:56] 2025-06-03 23:16:37,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:16:56] 2025-06-03 23:16:37,600 | INFO     | all data control threads have been joined
[2025-06-03 19:16:56] 2025-06-03 23:16:38,141 | INFO     | all job control threads have been joined
[2025-06-03 19:16:56] 2025-06-03 23:16:38,393 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:38,393 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:38,393 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:38,441 | INFO     | all payload control threads have been joined
[2025-06-03 19:16:56] 2025-06-03 23:16:38,606 | INFO     | [data] control thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:38,862 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:38,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:16:56] 2025-06-03 23:16:38,878 | INFO     | [job] validate thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:38,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:16:56] 2025-06-03 23:16:39,085 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:39,147 | INFO     | [job] control thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:39,446 | INFO     | [payload] control thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:39,497 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:39,540 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:39,823 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:39,828 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:40,865 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:42,936 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:48,272 | INFO     | job.realtimelogging is not enabled
[2025-06-03 19:16:56] 2025-06-03 23:16:49,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:16:56] 2025-06-03 23:16:50,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334985586496)>', '<ExcThread(monitor, started 140334533162752)>']
[2025-06-03 19:16:56] 2025-06-03 23:16:51,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:16:56] 2025-06-03 23:16:51,460 | INFO     | [monitor] control thread has ended
[2025-06-03 19:16:56] 2025-06-03 23:16:56,009 | INFO     | all workflow threads have been joined
[2025-06-03 19:16:56] 2025-06-03 23:16:56,010 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:16:56] 2025-06-03 23:16:56,010 | INFO     | traces error code: 0
[2025-06-03 19:16:56] 2025-06-03 23:16:56,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:16:56] 2025-06-03 23:16:56,195 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:16:56] 2025-06-03 23:16:56,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:16:56] 2025-06-03 23:16:56,199 [wrapper] pilotpid: 5847
[2025-06-03 19:16:56] 2025-06-03 23:16:56,201 [wrapper] Pilot exit status: 0
[2025-06-03 19:16:56] 2025-06-03 23:16:56,211 [wrapper] pandaids: 6677920843
[2025-06-03 19:16:56] 2025-06-03 23:16:56,274 [wrapper] cleanup supervisor_pilot 95682 5848
[2025-06-03 19:16:56] 2025-06-03 23:16:56,308 [wrapper] Test setup, not cleaning
[2025-06-03 19:16:56] 2025-06-03 23:16:56,311 [wrapper] apfmon messages muted
[2025-06-03 19:16:56] 2025-06-03 23:16:56,313 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:16:56] 2025-06-03 23:16:56,315 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:16:56]  *** Error codes and diagnostics ***
[2025-06-03 19:16:56]     "exeErrorCode": 0,
[2025-06-03 19:16:56]     "exeErrorDiag": "",
[2025-06-03 19:16:56]     "pilotErrorCode": 0,
[2025-06-03 19:16:56]     "pilotErrorDiag": "",
[2025-06-03 19:16:56]  *** Listing of results directory ***
[2025-06-03 19:16:56] total 390552
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 14:32 queuedata.json
[2025-06-03 19:16:56] -rwx------ 1 boincer umatlas     37140 Jun  3 14:33 runpilot2-wrapper.sh
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas       100 Jun  3 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:16:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 18:05 run_atlas
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas       105 Jun  3 18:05 job.xml
[2025-06-03 19:16:56] -rw-r--r-- 2 boincer umatlas 215010117 Jun  3 18:05 EVNT.45006593._001699.pool.root.1
[2025-06-03 19:16:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:05 start_atlas.sh
[2025-06-03 19:16:56] drwxrwx--x 2 boincer umatlas      4096 Jun  3 18:05 shared
[2025-06-03 19:16:56] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 18:05 input.tar.gz
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas         0 Jun  3 18:05 boinc_lockfile
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 18:05 pandaJob.out
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas    986869 Jun  3 18:06 agis_schedconf.cvmfs.json
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas   1603667 Jun  3 18:06 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:16:56] drwx------ 4 boincer umatlas      4096 Jun  3 18:06 pilot3
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas      6386 Jun  3 19:09 init_data.xml
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas       529 Jun  3 19:16 boinc_task_state.xml
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas 179653368 Jun  3 19:16 HITS.45006595._042353.pool.root.1
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas        95 Jun  3 19:16 pilot_heartbeat.json
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas      1040 Jun  3 19:16 memory_monitor_summary.json
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas    294805 Jun  3 19:16 log.45006595._042353.job.log.tgz.1
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas      7702 Jun  3 19:16 heartbeat.json
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 19:16 boinc_mmap_file
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas        27 Jun  3 19:16 wrapper_checkpoint.txt
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas      4549 Jun  3 19:16 pilotlog.txt
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas    421756 Jun  3 19:16 log.45006595._042353.job.log.1
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas       357 Jun  3 19:16 output.list
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas       620 Jun  3 19:16 runtime_log
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas    737280 Jun  3 19:16 result.tar.gz
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas       657 Jun  3 19:16 V0IODmFdlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNilKDmAglbTo.diag
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 19:16 runtime_log.err
[2025-06-03 19:16:56] -rw-r--r-- 1 boincer umatlas     22269 Jun  3 19:16 stderr.txt
[2025-06-03 19:16:56] HITS file was successfully produced:
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas 179653368 Jun  3 19:16 shared/HITS.pool.root.1
[2025-06-03 19:16:56]  *** Contents of shared directory: ***
[2025-06-03 19:16:56] total 386656
[2025-06-03 19:16:56] -rw-r--r-- 2 boincer umatlas 215010117 Jun  3 18:05 ATLAS.root_0
[2025-06-03 19:16:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:05 start_atlas.sh
[2025-06-03 19:16:56] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 18:05 input.tar.gz
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas 179653368 Jun  3 19:16 HITS.pool.root.1
[2025-06-03 19:16:56] -rw------- 1 boincer umatlas    737280 Jun  3 19:16 result.tar.gz
19:16:57 (97479): run_atlas exited; CPU time 27180.682034
19:16:57 (97479): called boinc_finish(0)

</stderr_txt>
]]>

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