Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:45 (13350): wrapper (7.7.26015): starting
06:51:45 (13350): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:51:46] Arguments: --nthreads 8
[2025-06-04 06:51:46] Threads: 8
[2025-06-04 06:51:46] Checking for CVMFS
[2025-06-04 06:51:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:51:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:51:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:51:48] 2.11.2.0 32728 32740 91896 146768 3 16 24683267 25165824 4294 130560 0 16907918 99.795 19243448 2231 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 06:51:48] CVMFS is ok
[2025-06-04 06:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:51:48] Checking for apptainer binary...
[2025-06-04 06:51:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:51:48] Running /usr/bin/apptainer --version
[2025-06-04 06:51:48] apptainer version 1.3.2-1.el7
[2025-06-04 06:51:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:13:49] cg-vwn337.simple-grid.lan
[2025-06-04 07:13:49] apptainer works
[2025-06-04 07:13:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:13:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:13:50] Starting ATLAS job with PandaID=6677920656
[2025-06-04 07:13:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:08:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:08:15] 2025-06-04 09:15:33,014 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677920656/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,015 | INFO     | extracted standard info from prmon json
[2025-06-04 12:08:15] 2025-06-04 09:15:33,015 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:08:15] 2025-06-04 09:15:33,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:08:15] 2025-06-04 09:15:33,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:08:15] 2025-06-04 09:15:33,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:08:15] 2025-06-04 09:15:33,021 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:08:15] 2025-06-04 09:15:33,022 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 12:08:15] 2025-06-04 09:15:33,024 | INFO     | sum of deviations: 51497006267.50002
[2025-06-04 12:08:15] 2025-06-04 09:15:33,024 | INFO     | mean x: 1749021554.5
[2025-06-04 12:08:15] 2025-06-04 09:15:33,024 | INFO     | mean y: 2448839.9867256638
[2025-06-04 12:08:15] 2025-06-04 09:15:33,024 | INFO     | -- intersect: -25161680322.97133
[2025-06-04 12:08:15] 2025-06-04 09:15:33,024 | INFO     | intersect: -25161680322.97133
[2025-06-04 12:08:15] 2025-06-04 09:15:33,025 | INFO     | chi2: 6.687688324357634
[2025-06-04 12:08:15] 2025-06-04 09:15:33,033 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,036 | INFO     | sum of deviations: 64976682598.000015
[2025-06-04 12:08:15] 2025-06-04 09:15:33,036 | INFO     | mean x: 1749021402.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,036 | INFO     | mean y: 2457512.443438914
[2025-06-04 12:08:15] 2025-06-04 09:15:33,036 | INFO     | -- intersect: -33952743468.58726
[2025-06-04 12:08:15] 2025-06-04 09:15:33,036 | INFO     | intersect: -33952743468.58726
[2025-06-04 12:08:15] 2025-06-04 09:15:33,037 | INFO     | chi2: 5.981585753385464
[2025-06-04 12:08:15] 2025-06-04 09:15:33,037 | INFO     | current chi2=5.981585753385464 (change=10.558245790259553 %)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,037 | INFO     | right removable region: 220
[2025-06-04 12:08:15] 2025-06-04 09:15:33,037 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,039 | INFO     | sum of deviations: -26430052366.999996
[2025-06-04 12:08:15] 2025-06-04 09:15:33,039 | INFO     | mean x: 1749021707.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,040 | INFO     | mean y: 2499935.7556561087
[2025-06-04 12:08:15] 2025-06-04 09:15:33,040 | INFO     | -- intersect: 13814191463.792597
[2025-06-04 12:08:15] 2025-06-04 09:15:33,040 | INFO     | intersect: 13814191463.792597
[2025-06-04 12:08:15] 2025-06-04 09:15:33,040 | INFO     | chi2: 1.9171501930825312
[2025-06-04 12:08:15] 2025-06-04 09:15:33,040 | INFO     | current chi2=1.9171501930825312 (change=71.33314083881628 %)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,041 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,042 | INFO     | sum of deviations: -55115789146.99998
[2025-06-04 12:08:15] 2025-06-04 09:15:33,043 | INFO     | mean x: 1749021859.5
[2025-06-04 12:08:15] 2025-06-04 09:15:33,043 | INFO     | mean y: 2519484.0833333335
[2025-06-04 12:08:15] 2025-06-04 09:15:33,043 | INFO     | -- intersect: 30851505844.677597
[2025-06-04 12:08:15] 2025-06-04 09:15:33,043 | INFO     | intersect: 30851505844.677597
[2025-06-04 12:08:15] 2025-06-04 09:15:33,043 | INFO     | chi2: 1.0219608679955692
[2025-06-04 12:08:15] 2025-06-04 09:15:33,044 | INFO     | current chi2=1.0219608679955692 (change=46.693750354927204 %)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,044 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | sum of deviations: -56679379271.99999
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | mean x: 1749022012.0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | mean y: 2520584.412322275
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | -- intersect: 34035841249.527462
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | intersect: 34035841249.527462
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | chi2: 0.9972692657184637
[2025-06-04 12:08:15] 2025-06-04 09:15:33,046 | INFO     | current chi2=0.9972692657184637 (change=2.416100562200047 %)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,047 | INFO     | left removable region: 30
[2025-06-04 12:08:15] 2025-06-04 09:15:33,047 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 12:08:15] 2025-06-04 09:15:33,048 | INFO     | sum of deviations: -20954372787.999992
[2025-06-04 12:08:15] 2025-06-04 09:15:33,049 | INFO     | mean x: 1749022286.5
[2025-06-04 12:08:15] 2025-06-04 09:15:33,049 | INFO     | mean y: 2514330.042105263
[2025-06-04 12:08:15] 2025-06-04 09:15:33,049 | INFO     | -- intersect: 17234797120.491035
[2025-06-04 12:08:15] 2025-06-04 09:15:33,049 | INFO     | intersect: 17234797120.491035
[2025-06-04 12:08:15] 2025-06-04 09:15:33,049 | INFO     | chi2: 0.1557822196807082
[2025-06-04 12:08:15] 2025-06-04 09:15:33,049 | INFO     | -- intersect: 17234797120.491035
[2025-06-04 12:08:15] 2025-06-04 09:15:33,050 | INFO     | current memory leak: -9.85 B/s (using 190 data points, chi2=0.16)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,058 | INFO     | ..............................
[2025-06-04 12:08:15] 2025-06-04 09:15:33,058 | INFO     | . Timing measurements:
[2025-06-04 12:08:15] 2025-06-04 09:15:33,058 | INFO     | . get job = 0 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,058 | INFO     | . initial setup = 8 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,058 | INFO     | . payload setup = 143 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,059 | INFO     | . stage-in = 0 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,059 | INFO     | . payload execution = 13887 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,059 | INFO     | . stage-out = 4 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,059 | INFO     | . log creation = 1 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,059 | INFO     | ..............................
[2025-06-04 12:08:15] 2025-06-04 09:15:33,241 | INFO     | 
[2025-06-04 12:08:15] 2025-06-04 09:15:33,241 | INFO     | job summary report
[2025-06-04 12:08:15] 2025-06-04 09:15:33,241 | INFO     | --------------------------------------------------
[2025-06-04 12:08:15] 2025-06-04 09:15:33,241 | INFO     | PanDA job id: 6677920656
[2025-06-04 12:08:15] 2025-06-04 09:15:33,241 | INFO     | task id: 45006595
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | errors: (none)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | pilot state: finished 
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | transexitcode: 0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | exeerrorcode: 0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | exeerrordiag: 
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | exitcode: 0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | exitmsg: OK
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | cpuconsumptiontime: 51404 s
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | nevents: 400
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | neventsw: 0
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | pid: 7626
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | pgrp: 7626
[2025-06-04 12:08:15] 2025-06-04 09:15:33,242 | INFO     | corecount: 8
[2025-06-04 12:08:15] 2025-06-04 09:15:33,243 | INFO     | event service: False
[2025-06-04 12:08:15] 2025-06-04 09:15:33,243 | INFO     | sizes: {0: 2405184, 1: 2405184, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 54: 2405480, 65: 2405508, 76: 2405536, 85: 2405798, 87: 2405826, 14034: 2435788
[2025-06-04 12:08:15] 2025-06-04 09:15:33,243 | INFO     | --------------------------------------------------
[2025-06-04 12:08:15] 2025-06-04 09:15:33,243 | INFO     | 
[2025-06-04 12:08:15] 2025-06-04 09:15:33,243 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 12:08:15] 2025-06-04 09:15:33,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:08:15] 2025-06-04 09:15:33,725 | INFO     | job 6677920656 has completed (purged errors)
[2025-06-04 12:08:15] 2025-06-04 09:15:33,726 | INFO     | overall cleanup function is called
[2025-06-04 12:08:15] 2025-06-04 09:15:34,734 | INFO     | --- collectZombieJob: --- 10, [7626]
[2025-06-04 12:08:15] 2025-06-04 09:15:34,735 | INFO     | zombie collector waiting for pid 7626
[2025-06-04 12:08:15] 2025-06-04 09:15:34,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:08:15] 2025-06-04 09:15:34,735 | INFO     | collected zombie processes
[2025-06-04 12:08:15] 2025-06-04 09:15:34,735 | INFO     | will attempt to kill all subprocesses of pid=7626
[2025-06-04 12:08:15] 2025-06-04 09:15:34,863 | INFO     | process IDs to be killed: [7626] (in reverse order)
[2025-06-04 12:08:15] 2025-06-04 09:15:35,384 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:08:15] 2025-06-04 09:15:35,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:08:15] 2025-06-04 09:15:35,388 | INFO     | did not find any defunct processes belonging to 7626
[2025-06-04 12:08:15] 2025-06-04 09:15:35,392 | INFO     | did not find any defunct processes belonging to 7626
[2025-06-04 12:08:15] 2025-06-04 09:15:35,392 | INFO     | ready for new job
[2025-06-04 12:08:15] 2025-06-04 09:15:35,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:08:15] 2025-06-04 09:15:35,394 | INFO     | **************************************
[2025-06-04 12:08:15] 2025-06-04 09:15:35,394 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:08:15] 2025-06-04 09:15:35,395 | INFO     | **************************************
[2025-06-04 12:08:15] 2025-06-04 09:15:35,395 | INFO     | 
[2025-06-04 12:08:15] 2025-06-04 09:15:35,395 | INFO     | pilot is running in a VM
[2025-06-04 12:08:15] 2025-06-04 09:15:35,395 | INFO     | architecture information:
[2025-06-04 12:08:15] 2025-06-04 09:15:35,396 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:08:15] 2025-06-04 09:15:35,657 | INFO     | cat /etc/os-release:
[2025-06-04 12:08:15] NAME="CentOS Linux"
[2025-06-04 12:08:15] VERSION="7 (Core)"
[2025-06-04 12:08:15] ID="centos"
[2025-06-04 12:08:15] ID_LIKE="rhel fedora"
[2025-06-04 12:08:15] VERSION_ID="7"
[2025-06-04 12:08:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:08:15] ANSI_COLOR="0;31"
[2025-06-04 12:08:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:08:15] HOME_URL="https://www.centos.org/"
[2025-06-04 12:08:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:08:15] 
[2025-06-04 12:08:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:08:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:08:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:08:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:08:15] 
[2025-06-04 12:08:15] 2025-06-04 09:15:35,658 | INFO     | **************************************
[2025-06-04 12:08:15] 2025-06-04 09:15:36,162 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 12:08:15] 2025-06-04 09:15:36,401 | INFO     | sufficient remaining disk space (496443064320 B)
[2025-06-04 12:08:15] 2025-06-04 09:15:36,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:08:15] 2025-06-04 09:15:36,402 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:08:15] 2025-06-04 09:15:36,402 | INFO     | update_server=False
[2025-06-04 12:08:15] 2025-06-04 09:15:36,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:08:15] 2025-06-04 09:15:36,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:08:15] 2025-06-04 09:15:36,404 | INFO     | aborting loop
[2025-06-04 12:08:15] 2025-06-04 09:15:36,415 | INFO     | all payload control threads have been joined
[2025-06-04 12:08:15] 2025-06-04 09:15:36,621 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:08:15] 2025-06-04 09:15:36,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:08:15] 2025-06-04 09:15:36,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:08:15] 2025-06-04 09:15:36,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:08:15] 2025-06-04 09:15:36,920 | INFO     | all job control threads have been joined
[2025-06-04 12:08:15] 2025-06-04 09:15:37,025 | INFO     | all data control threads have been joined
[2025-06-04 12:08:15] 2025-06-04 09:15:37,408 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:37,408 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:37,410 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:37,422 | INFO     | [payload] control thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:37,434 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:37,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:08:15] 2025-06-04 09:15:37,793 | INFO     | [job] validate thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:37,927 | INFO     | [job] control thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,032 | INFO     | [data] control thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,088 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,128 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:08:15] 2025-06-04 09:15:38,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,396 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,679 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:38,769 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:39,263 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:41,629 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:08:15] 2025-06-04 09:15:41,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751785158464)>', '<ExcThread(monitor, started 139751474566912)>']
[2025-06-04 12:08:15] 2025-06-04 09:15:42,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:08:15] 2025-06-04 09:15:42,657 | INFO     | [monitor] control thread has ended
[2025-06-04 12:08:15] 2025-06-04 09:15:46,724 | INFO     | all workflow threads have been joined
[2025-06-04 12:08:15] 2025-06-04 09:15:46,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:08:15] 2025-06-04 09:15:46,724 | INFO     | traces error code: 0
[2025-06-04 12:08:15] 2025-06-04 09:15:46,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:08:15] 2025-06-04 09:15:47,070 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:08:15] 2025-06-04 09:15:47,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:08:15] 2025-06-04 09:15:47,211 [wrapper] pilotpid: 29589
[2025-06-04 12:08:15] 2025-06-04 09:15:47,256 [wrapper] Pilot exit status: 0
[2025-06-04 12:08:15] 2025-06-04 09:15:47,646 [wrapper] pandaids: 6677920656
[2025-06-04 12:08:15] 2025-06-04 09:15:48,414 [wrapper] cleanup supervisor_pilot 14081 29590
[2025-06-04 12:08:15] 2025-06-04 09:15:48,466 [wrapper] Test setup, not cleaning
[2025-06-04 12:08:15] 2025-06-04 09:15:48,514 [wrapper] apfmon messages muted
[2025-06-04 12:08:15] 2025-06-04 09:15:48,564 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:08:15] 2025-06-04 09:15:48,622 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:08:15]  *** Error codes and diagnostics ***
[2025-06-04 12:08:15]     "exeErrorCode": 0,
[2025-06-04 12:08:15]     "exeErrorDiag": "",
[2025-06-04 12:08:15]     "pilotErrorCode": 0,
[2025-06-04 12:08:15]     "pilotErrorDiag": "",
[2025-06-04 12:08:15]  *** Listing of results directory ***
[2025-06-04 12:08:15] total 391540
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:30 queuedata.json
[2025-06-04 12:08:15] -rwx------. 1 boinc boinc     37140 Jun  3 20:30 runpilot2-wrapper.sh
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:08:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:51 run_atlas
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:51 job.xml
[2025-06-04 12:08:15] -rw-r--r--. 2 boinc boinc 213426457 Jun  4 06:51 EVNT.45006593._001693.pool.root.1
[2025-06-04 12:08:15] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:51 shared
[2025-06-04 12:08:15] -rw-r--r--. 2 boinc boinc    508875 Jun  4 06:51 input.tar.gz
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc      6391 Jun  4 06:51 init_data.xml
[2025-06-04 12:08:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:51 start_atlas.sh
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:51 boinc_lockfile
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:13 pandaJob.out
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc    986745 Jun  4 07:16 agis_schedconf.cvmfs.json
[2025-06-04 12:08:15] drwx------. 4 boinc boinc      4096 Jun  4 07:16 pilot3
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc 180485403 Jun  4 11:12 HITS.45006595._042208.pool.root.1
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:12 boinc_task_state.xml
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc      1015 Jun  4 11:13 memory_monitor_summary.json
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc   1603667 Jun  4 11:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc    383568 Jun  4 11:13 log.45006595._042208.job.log.tgz.1
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc        95 Jun  4 11:15 pilot_heartbeat.json
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc      7687 Jun  4 11:15 heartbeat.json
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc      4416 Jun  4 11:15 pilotlog.txt
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc   1218975 Jun  4 11:15 log.45006595._042208.job.log.1
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc       357 Jun  4 11:15 output.list
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:15 runtime_log
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc   1617920 Jun  4 11:15 result.tar.gz
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:15 runtime_log.err
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc       657 Jun  4 11:15 iE4KDmUalg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeglKDmeeINPm.diag
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:08 boinc_mmap_file
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:08 wrapper_checkpoint.txt
[2025-06-04 12:08:15] -rw-r--r--. 1 boinc boinc     20534 Jun  4 12:08 stderr.txt
[2025-06-04 12:08:15] HITS file was successfully produced:
[2025-06-04 12:08:15] -rw-------. 1 boinc boinc 180485403 Jun  4 11:12 shared/HITS.pool.root.1
[2025-06-04 12:08:15]  *** Contents of shared directory: ***
[2025-06-04 12:08:16] total 386780
[2025-06-04 12:08:16] -rw-r--r--. 2 boinc boinc 213426457 Jun  4 06:51 ATLAS.root_0
[2025-06-04 12:08:16] -rw-r--r--. 2 boinc boinc    508875 Jun  4 06:51 input.tar.gz
[2025-06-04 12:08:16] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:51 start_atlas.sh
[2025-06-04 12:08:16] -rw-------. 1 boinc boinc 180485403 Jun  4 11:12 HITS.pool.root.1
[2025-06-04 12:08:16] -rw-------. 1 boinc boinc   1617920 Jun  4 11:15 result.tar.gz
12:08:17 (13350): run_atlas exited; CPU time 51608.385169
12:08:17 (13350): called boinc_finish(0)

</stderr_txt>
]]>

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