Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:55 (112999): wrapper (7.7.26015): starting
15:29:55 (112999): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 15:29:55] Arguments: --nthreads 12
[2025-06-03 15:29:55] Threads: 12
[2025-06-03 15:29:55] Checking for CVMFS
[2025-06-03 15:29:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:29:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:29:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:29:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:29:56] 2.11.5.0 2016779 32295 226468 146760 1 455 23076000 45568000 14607 130560 0 345311500 99.806 209467681 18054 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 15:29:56] CVMFS is ok
[2025-06-03 15:29:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:29:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:29:56] Further information can be found at the LHC@home message board.
[2025-06-03 15:29:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:29:56] Checking for apptainer binary...
[2025-06-03 15:29:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:29:56] Running /usr/bin/apptainer --version
[2025-06-03 15:29:56] apptainer version 1.4.0-1.el9
[2025-06-03 15:29:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:29:56] wns0046.triumf.lcg
[2025-06-03 15:29:56] apptainer works
[2025-06-03 15:29:56] Set ATHENA_PROC_NUMBER=12
[2025-06-03 15:29:56] Set ATHENA_CORE_NUMBER=12
[2025-06-03 15:29:56] Starting ATLAS job with PandaID=6678070871
[2025-06-03 15:29:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:33:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | found no stored workdir sizes
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | WARNING  | wrong length of table data, x=[1748989846.0], y=[1017.0] (must be same and length>=4)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | ..............................
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . Timing measurements:
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . get job = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . initial setup = 3 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . payload setup = 6 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . stage-in = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . payload execution = 21 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . stage-out = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . log creation = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | ..............................
[2025-06-03 15:33:20] 2025-06-03 22:33:06,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:33:20] 2025-06-03 22:33:06,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678070871/pilotlog.txt
[2025-06-03 15:33:20] 2025-06-03 22:33:06,114 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 15:33:20] - Log from pilotlog.txt -
[2025-06-03 15:33:20] 2025-06-03 22:33:06,071 | INFO     | extracted standard info from prmon json
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | found no stored workdir sizes
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | WARNING  | wrong length of table data, x=[1748989846.0], y=[1017.0] (must be same and length>=4)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | ..............................
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . Timing measurements:
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . get job = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . initial setup = 3 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . payload setup = 6 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . stage-in = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . payload execution = 21 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . stage-out = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . log creation = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | ..............................
[2025-06-03 15:33:20] 2025-06-03 22:33:06,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:33:20] 2025-06-03 22:33:06,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678070871/pilotlog.txt
[2025-06-03 15:33:20] 2025-06-03 22:33:06,115 | WARNING  | 
[2025-06-03 15:33:20] [begin log extracts]
[2025-06-03 15:33:20] - Log from pilotlog.txt -
[2025-06-03 15:33:20] 2025-06-03 22:33:06,071 | INFO     | extracted standard info from prmon json
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | WARNING  | found no stored workdir sizes
[2025-06-03 15:33:20] 2025-06-03 22:33:06,072 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | WARNING  | wrong length of table data, x=[1748989846.0], y=[1017.0] (must be same and length>=4)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | ..............................
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . Timing measurements:
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . get job = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . initial setup = 3 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . payload setup = 6 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . stage-in = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . payload execution = 21 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . stage-out = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | . log creation = 0 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,073 | INFO     | ..............................
[2025-06-03 15:33:20] 2025-06-03 22:33:06,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:33:20] 2025-06-03 22:33:06,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678070871/pilotlog.txt
[2025-06-03 15:33:20] [end log extracts]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,115 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,116 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 15:33:20] 2025-06-03 22:33:06,175 | INFO     | 
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | job summary report
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | --------------------------------------------------
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | PanDA job id: 6678070871
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | task id: 45006595
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 15:30:54,557 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | pilot state: failed 
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | transexitcode: 65
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | exeerrorcode: 65
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | exitcode: 65
[2025-06-03 15:33:20] 2025-06-03 22:33:06,176 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,181 | INFO     | cpuconsumptiontime: 16 s
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | nevents: 0
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | neventsw: 0
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | pid: 125008
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | pgrp: 125008
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | corecount: 12
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | event service: False
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | sizes: {0: 2405009, 1: 2405208, 9: 2405414, 12: 2405442, 31: 2428702, 32: 2433093, 155: 2433207}
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | --------------------------------------------------
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | 
[2025-06-03 15:33:20] 2025-06-03 22:33:06,182 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | job 6678070871 has completed (purged errors)
[2025-06-03 15:33:20] 2025-06-03 22:33:06,223 | INFO     | overall cleanup function is called
[2025-06-03 15:33:20] 2025-06-03 22:33:07,229 | INFO     | --- collectZombieJob: --- 10, [125008]
[2025-06-03 15:33:20] 2025-06-03 22:33:07,230 | INFO     | zombie collector waiting for pid 125008
[2025-06-03 15:33:20] 2025-06-03 22:33:07,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:33:20] 2025-06-03 22:33:07,232 | INFO     | collected zombie processes
[2025-06-03 15:33:20] 2025-06-03 22:33:07,232 | INFO     | will attempt to kill all subprocesses of pid=125008
[2025-06-03 15:33:20] 2025-06-03 22:33:07,435 | INFO     | process IDs to be killed: [125008] (in reverse order)
[2025-06-03 15:33:20] 2025-06-03 22:33:07,548 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:33:20] 2025-06-03 22:33:07,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:33:20] 2025-06-03 22:33:07,567 | INFO     | did not find any defunct processes belonging to 125008
[2025-06-03 15:33:20] 2025-06-03 22:33:07,575 | INFO     | did not find any defunct processes belonging to 125008
[2025-06-03 15:33:20] 2025-06-03 22:33:07,575 | INFO     | ready for new job
[2025-06-03 15:33:20] 2025-06-03 22:33:07,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:33:20] 2025-06-03 22:33:07,577 | INFO     | **************************************
[2025-06-03 15:33:20] 2025-06-03 22:33:07,577 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:33:20] 2025-06-03 22:33:07,577 | INFO     | **************************************
[2025-06-03 15:33:20] 2025-06-03 22:33:07,577 | INFO     | 
[2025-06-03 15:33:20] 2025-06-03 22:33:07,579 | INFO     | architecture information:
[2025-06-03 15:33:20] 2025-06-03 22:33:07,582 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:33:20] 2025-06-03 22:33:07,607 | INFO     | cat /etc/os-release:
[2025-06-03 15:33:20] NAME="CentOS Linux"
[2025-06-03 15:33:20] VERSION="7 (Core)"
[2025-06-03 15:33:20] ID="centos"
[2025-06-03 15:33:20] ID_LIKE="rhel fedora"
[2025-06-03 15:33:20] VERSION_ID="7"
[2025-06-03 15:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:33:20] ANSI_COLOR="0;31"
[2025-06-03 15:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:33:20] HOME_URL="https://www.centos.org/"
[2025-06-03 15:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:33:20] 
[2025-06-03 15:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:33:20] 
[2025-06-03 15:33:20] 2025-06-03 22:33:07,607 | INFO     | **************************************
[2025-06-03 15:33:20] 2025-06-03 22:33:08,110 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 15:33:20] 2025-06-03 22:33:08,126 | INFO     | sufficient remaining disk space (1926788808704 B)
[2025-06-03 15:33:20] 2025-06-03 22:33:08,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:33:20] 2025-06-03 22:33:08,126 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:33:20] 2025-06-03 22:33:08,126 | INFO     | update_server=False
[2025-06-03 15:33:20] 2025-06-03 22:33:08,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:33:20] 2025-06-03 22:33:08,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:33:20] 2025-06-03 22:33:08,191 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 15:33:20] 2025-06-03 22:33:08,192 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 15:33:20] 2025-06-03 22:33:08,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:33:20] 2025-06-03 22:33:08,192 | INFO     | will abort loop
[2025-06-03 15:33:20] 2025-06-03 22:33:08,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:33:20] 2025-06-03 22:33:08,619 | INFO     | PID=116733 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 15:33:20] 2025-06-03 22:33:08,620 | INFO     | .. there are 27 such processes running
[2025-06-03 15:33:20] 2025-06-03 22:33:08,620 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:33:20] 2025-06-03 22:33:08,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:33:20] 2025-06-03 22:33:08,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:33:20] 2025-06-03 22:33:08,780 | INFO     | all payload control threads have been joined
[2025-06-03 15:33:20] 2025-06-03 22:33:08,808 | INFO     | all data control threads have been joined
[2025-06-03 15:33:20] 2025-06-03 22:33:09,134 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,145 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,197 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,388 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,659 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,678 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,700 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,725 | INFO     | [job] validate thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,785 | INFO     | [payload] control thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,814 | INFO     | [data] control thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:09,853 | INFO     | all job control threads have been joined
[2025-06-03 15:33:20] 2025-06-03 22:33:10,119 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:10,227 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:10,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:33:20] 2025-06-03 22:33:10,434 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:10,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:10,859 | INFO     | [job] control thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:14,412 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:33:20] 2025-06-03 22:33:15,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559489140544)>', '<ExcThread(monitor, started 140558953596672)>']
[2025-06-03 15:33:20] 2025-06-03 22:33:15,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:33:20] 2025-06-03 22:33:15,660 | INFO     | [monitor] control thread has ended
[2025-06-03 15:33:20] 2025-06-03 22:33:20,123 | INFO     | all workflow threads have been joined
[2025-06-03 15:33:20] 2025-06-03 22:33:20,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:33:20] 2025-06-03 22:33:20,123 | INFO     | traces error code: 0
[2025-06-03 15:33:20] 2025-06-03 22:33:20,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:33:20] 2025-06-03 22:33:20,248 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:33:20] 2025-06-03 22:33:20,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:33:20] 2025-06-03 22:33:20,253 [wrapper] pilotpid: 116733
[2025-06-03 15:33:20] 2025-06-03 22:33:20,255 [wrapper] Pilot exit status: 0
[2025-06-03 15:33:20] 2025-06-03 22:33:20,264 [wrapper] pandaids: 6678070871
[2025-06-03 15:33:20] 2025-06-03 22:33:20,311 [wrapper] cleanup supervisor_pilot  116739 116734
[2025-06-03 15:33:20] 2025-06-03 22:33:20,314 [wrapper] Test setup, not cleaning
[2025-06-03 15:33:20] 2025-06-03 22:33:20,316 [wrapper] apfmon messages muted
[2025-06-03 15:33:20] 2025-06-03 22:33:20,319 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:33:20] 2025-06-03 22:33:20,321 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:33:20]  *** Error codes and diagnostics ***
[2025-06-03 15:33:20]     "exeErrorCode": 65,
[2025-06-03 15:33:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:33:20]     "pilotErrorCode": 1305,
[2025-06-03 15:33:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:33:20]  *** Listing of results directory ***
[2025-06-03 15:33:20] total 211908
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:09 pilot3.tar.gz
[2025-06-03 15:33:20] -rwx------. 1 boinc boinc     37140 Jun  3 13:16 runpilot2-wrapper.sh
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:16 queuedata.json
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:33:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:29 run_atlas
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:29 job.xml
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc      6601 Jun  3 15:29 init_data.xml
[2025-06-03 15:33:20] -rw-r--r--. 2 boinc boinc 212968513 Jun  3 15:29 EVNT.45006593._001794.pool.root.1
[2025-06-03 15:33:20] -rw-r--r--. 2 boinc boinc    508875 Jun  3 15:29 input.tar.gz
[2025-06-03 15:33:20] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:29 start_atlas.sh
[2025-06-03 15:33:20] drwxrwx--x. 2 boinc boinc      4096 Jun  3 15:29 shared
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:29 boinc_lockfile
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:29 pandaJob.out
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc    986861 Jun  3 15:30 agis_schedconf.cvmfs.json
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc   1603667 Jun  3 15:30 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:33:20] drwx------. 4 boinc boinc      4096 Jun  3 15:30 pilot3
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc       522 Jun  3 15:30 boinc_task_state.xml
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc       979 Jun  3 15:30 memory_monitor_summary.json
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc     20263 Jun  3 15:31 log.45006595._044746.job.log.tgz.1
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc        95 Jun  3 15:32 pilot_heartbeat.json
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc      8355 Jun  3 15:33 heartbeat.json
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:33 boinc_mmap_file
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc        22 Jun  3 15:33 wrapper_checkpoint.txt
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc      4932 Jun  3 15:33 pilotlog.txt
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc     73958 Jun  3 15:33 log.45006595._044746.job.log.1
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc       188 Jun  3 15:33 output.list
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:33 runtime_log
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc    112640 Jun  3 15:33 result.tar.gz
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc      8484 Jun  3 15:33 runtime_log.err
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc       644 Jun  3 15:33 F21NDm2Eng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi2lKDmtu0Q1m.diag
[2025-06-03 15:33:20] -rw-r--r--. 1 boinc boinc     21570 Jun  3 15:33 stderr.txt
[2025-06-03 15:33:20] No HITS result produced
[2025-06-03 15:33:20]  *** Contents of shared directory: ***
[2025-06-03 15:33:20] total 208612
[2025-06-03 15:33:20] -rw-r--r--. 2 boinc boinc 212968513 Jun  3 15:29 ATLAS.root_0
[2025-06-03 15:33:20] -rw-r--r--. 2 boinc boinc    508875 Jun  3 15:29 input.tar.gz
[2025-06-03 15:33:20] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:29 start_atlas.sh
[2025-06-03 15:33:20] -rw-------. 1 boinc boinc    112640 Jun  3 15:33 result.tar.gz
15:33:22 (112999): run_atlas exited; CPU time 21.460292
15:33:22 (112999): called boinc_finish(0)

</stderr_txt>
]]>

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