Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:25:41 (2273202): wrapper (7.7.26015): starting
09:25:41 (2273202): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 09:25:41] Arguments: --nthreads 3
[2025-06-04 09:25:41] Threads: 3
[2025-06-04 09:25:41] Checking for CVMFS
[2025-06-04 09:25:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:25:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:25:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:25:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:25:41] 2.9.2.0 1168766 2098 73644 146772 0 55 23294299 36864001 0 130560 0 1596972 99.991 521609 15640 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 09:25:41] CVMFS is ok
[2025-06-04 09:25:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:25:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:25:41] Further information can be found at the LHC@home message board.
[2025-06-04 09:25:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:25:41] Checking for apptainer binary...
[2025-06-04 09:25:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:25:41] Running /usr/bin/apptainer --version
[2025-06-04 09:25:41] apptainer version 1.3.6-6.1
[2025-06-04 09:25:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:25:41] atlasA212
[2025-06-04 09:25:41] apptainer works
[2025-06-04 09:25:41] Set ATHENA_PROC_NUMBER=3
[2025-06-04 09:25:41] Set ATHENA_CORE_NUMBER=3
[2025-06-04 09:25:41] Starting ATLAS job with PandaID=6677921325
[2025-06-04 09:25:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:54:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:54:46]  storage_token=
[2025-06-04 10:54:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677921325/log.45006595._042536.job.log.tgz.1
[2025-06-04 10:54:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/86/log.45006595._042536.job.log.tgz.1
[2025-06-04 10:54:46]  workdir=None
[2025-06-04 10:54:46] ]
[2025-06-04 10:54:46] 2025-06-04 08:54:19,090 | INFO     | transferring file log.45006595._042536.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677921325/log.45006595._042536.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 10:54:46] 2025-06-04 08:54:19,090 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677921325/log.45006595._042536.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0425
[2025-06-04 10:54:46] 2025-06-04 08:54:19,107 | INFO     | adding to output.list: log.45006595._042536.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/86/log.45006595._042536.job.log.tg
[2025-06-04 10:54:46] 2025-06-04 08:54:19,108 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:54:46] 2025-06-04 08:54:19,108 | INFO     | summary of transferred files:
[2025-06-04 10:54:46] 2025-06-04 08:54:19,108 | INFO     |  -- lfn=log.45006595._042536.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:54:46] 2025-06-04 08:54:19,108 | INFO     | stage-out finished correctly
[2025-06-04 10:54:46] 2025-06-04 08:54:19,210 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:54:46] 2025-06-04 08:54:21,372 | INFO     | job 6677921325 has state=finished
[2025-06-04 10:54:46] 2025-06-04 08:54:21,372 | INFO     | preparing for final server update for job 6677921325 in state='finished'
[2025-06-04 10:54:46] 2025-06-04 08:54:21,373 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:54:46] 2025-06-04 08:54:21,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:54:46] 2025-06-04 08:54:21,373 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:54:46] 2025-06-04 08:54:21,373 | INFO     | job 6677921325 has finished - writing final server update
[2025-06-04 10:54:46] 2025-06-04 08:54:21,373 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:54:46] 2025-06-04 08:54:21,374 | INFO     | executing command: lscpu
[2025-06-04 10:54:46] 2025-06-04 08:54:21,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:54:46] 2025-06-04 08:54:22,514 | WARNING  | process 2283423 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:54:46] 2025-06-04 08:54:22,514 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921325/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:54:46] 2025-06-04 08:54:22,514 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921325/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:54:46] 2025-06-04 08:54:22,515 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2253846 B
[2025-06-04 10:54:46] 2025-06-04 08:54:22,516 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16036 B
[2025-06-04 10:54:46] 2025-06-04 08:54:22,516 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 10:54:46] 2025-06-04 08:54:22,828 | INFO     | PID=2276853 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:54:46] 2025-06-04 08:54:23,829 | INFO     | 5316s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 10:54:46] 2025-06-04 08:54:25,650 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:54:46] 2025-06-04 08:54:25,653 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921325/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,654 | INFO     | extracted standard info from prmon json
[2025-06-04 10:54:46] 2025-06-04 08:54:25,654 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:54:46] 2025-06-04 08:54:25,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:54:46] 2025-06-04 08:54:25,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:54:46] 2025-06-04 08:54:25,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:54:46] 2025-06-04 08:54:25,655 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | sum of deviations: -17856140393.0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | mean x: 1749024685.5
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | mean y: 2594247.05
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | -- intersect: 196747279699.59842
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | intersect: 196747279699.59842
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | chi2: 0.15866491390052534
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | -- intersect: 196747279699.59842
[2025-06-04 10:54:46] 2025-06-04 08:54:25,656 | INFO     | current memory leak: -112.49 B/s (using 80 data points, chi2=0.16)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,657 | INFO     | ..............................
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . Timing measurements:
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . get job = 0 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . initial setup = 1 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . payload setup = 4 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . stage-in = 0 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . payload execution = 5287 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . stage-out = 0 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | . log creation = 0 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,658 | INFO     | ..............................
[2025-06-04 10:54:46] 2025-06-04 08:54:25,679 | INFO     | sufficient remaining disk space (377426542592 B)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,695 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | 
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | job summary report
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | --------------------------------------------------
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | PanDA job id: 6677921325
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | task id: 45006595
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | errors: (none)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | pilot state: finished 
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | transexitcode: 0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | exeerrorcode: 0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | exeerrordiag: 
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | exitcode: 0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | exitmsg: OK
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | cpuconsumptiontime: 15242 s
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | nevents: 400
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | neventsw: 0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | pid: 2283423
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | pgrp: 2283423
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | corecount: 3
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | event service: False
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | sizes: {0: 2405073, 1: 2405215, 4: 2405421, 11: 2405449, 5296: 2431931, 5297: 2441062, 5303: 2441176}
[2025-06-04 10:54:46] 2025-06-04 08:54:25,698 | INFO     | --------------------------------------------------
[2025-06-04 10:54:46] 2025-06-04 08:54:25,699 | INFO     | 
[2025-06-04 10:54:46] 2025-06-04 08:54:25,699 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 10:54:46] 2025-06-04 08:54:25,702 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6677921325: 2554805 B (within 2537553920 B limit)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,703 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6677921325/HITS.45006595._042536.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,703 | INFO     | total size of present files: 0 B (workdir size: 2554805 B)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,703 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6677921325/HITS.45006595._042536.pool.root.1 since it does not exist
[2025-06-04 10:54:46] 2025-06-04 08:54:25,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:54:46] 2025-06-04 08:54:25,716 | INFO     | job 6677921325 has completed (purged errors)
[2025-06-04 10:54:46] 2025-06-04 08:54:25,717 | INFO     | overall cleanup function is called
[2025-06-04 10:54:46] 2025-06-04 08:54:25,773 | INFO     | number of running child processes to parent process 2283423: 1
[2025-06-04 10:54:46] 2025-06-04 08:54:25,774 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:54:46] 2025-06-04 08:54:25,774 | INFO     | aborting job monitoring since job object (job id=6677921325) has expired
[2025-06-04 10:54:46] 2025-06-04 08:54:26,723 | INFO     | --- collectZombieJob: --- 10, [2283423]
[2025-06-04 10:54:46] 2025-06-04 08:54:26,723 | INFO     | zombie collector waiting for pid 2283423
[2025-06-04 10:54:46] 2025-06-04 08:54:26,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:54:46] 2025-06-04 08:54:26,723 | INFO     | collected zombie processes
[2025-06-04 10:54:46] 2025-06-04 08:54:26,723 | INFO     | will attempt to kill all subprocesses of pid=2283423
[2025-06-04 10:54:46] 2025-06-04 08:54:26,787 | INFO     | process IDs to be killed: [2283423] (in reverse order)
[2025-06-04 10:54:46] 2025-06-04 08:54:26,822 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:54:46] 2025-06-04 08:54:26,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:54:46] 2025-06-04 08:54:26,825 | INFO     | did not find any defunct processes belonging to 2283423
[2025-06-04 10:54:46] 2025-06-04 08:54:26,827 | INFO     | did not find any defunct processes belonging to 2283423
[2025-06-04 10:54:46] 2025-06-04 08:54:26,827 | INFO     | ready for new job
[2025-06-04 10:54:46] 2025-06-04 08:54:26,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:54:46] 2025-06-04 08:54:26,828 | INFO     | **************************************
[2025-06-04 10:54:46] 2025-06-04 08:54:26,828 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:54:46] 2025-06-04 08:54:26,828 | INFO     | **************************************
[2025-06-04 10:54:46] 2025-06-04 08:54:26,829 | INFO     | 
[2025-06-04 10:54:46] 2025-06-04 08:54:26,829 | INFO     | architecture information:
[2025-06-04 10:54:46] 2025-06-04 08:54:26,829 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:54:46] 2025-06-04 08:54:26,841 | INFO     | cat /etc/os-release:
[2025-06-04 10:54:46] NAME="CentOS Linux"
[2025-06-04 10:54:46] VERSION="7 (Core)"
[2025-06-04 10:54:46] ID="centos"
[2025-06-04 10:54:46] ID_LIKE="rhel fedora"
[2025-06-04 10:54:46] VERSION_ID="7"
[2025-06-04 10:54:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:54:46] ANSI_COLOR="0;31"
[2025-06-04 10:54:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:54:46] HOME_URL="https://www.centos.org/"
[2025-06-04 10:54:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:54:46] 
[2025-06-04 10:54:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:54:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:54:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:54:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:54:46] 
[2025-06-04 10:54:46] 2025-06-04 08:54:26,841 | INFO     | **************************************
[2025-06-04 10:54:46] 2025-06-04 08:54:27,343 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | INFO     | sufficient remaining disk space (377429688320 B)
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | INFO     | update_server=False
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:54:46] 2025-06-04 08:54:27,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:54:46] 2025-06-04 08:54:27,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:54:46] 2025-06-04 08:54:27,357 | INFO     | aborting loop
[2025-06-04 10:54:46] 2025-06-04 08:54:27,357 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:54:46] 2025-06-04 08:54:27,357 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:54:46] 2025-06-04 08:54:27,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:54:46] 2025-06-04 08:54:27,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:54:46] 2025-06-04 08:54:28,027 | INFO     | all data control threads have been joined
[2025-06-04 10:54:46] 2025-06-04 08:54:28,082 | INFO     | all payload control threads have been joined
[2025-06-04 10:54:46] 2025-06-04 08:54:28,361 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:28,361 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:28,361 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:28,391 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:28,411 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:28,548 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:28,865 | INFO     | all job control threads have been joined
[2025-06-04 10:54:46] 2025-06-04 08:54:29,032 | INFO     | [data] control thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,087 | INFO     | [payload] control thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,235 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,274 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,361 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,744 | INFO     | [job] validate thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:54:46] 2025-06-04 08:54:29,824 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:29,870 | INFO     | [job] control thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:33,758 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:37,859 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:54:46] 2025-06-04 08:54:38,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:54:46] 2025-06-04 08:54:40,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157631379264)>', '<ExcThread(monitor, started 140156929570560)>']
[2025-06-04 10:54:46] 2025-06-04 08:54:41,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:54:46] 2025-06-04 08:54:41,426 | INFO     | [monitor] control thread has ended
[2025-06-04 10:54:46] 2025-06-04 08:54:45,985 | INFO     | all workflow threads have been joined
[2025-06-04 10:54:46] 2025-06-04 08:54:45,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:54:46] 2025-06-04 08:54:45,985 | INFO     | traces error code: 0
[2025-06-04 10:54:46] 2025-06-04 08:54:45,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:54:46] 2025-06-04 08:54:46,062 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:54:46] 2025-06-04 08:54:46,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:54:46] 2025-06-04 08:54:46,068 [wrapper] pilotpid: 2276853
[2025-06-04 10:54:46] 2025-06-04 08:54:46,071 [wrapper] Pilot exit status: 0
[2025-06-04 10:54:46] 2025-06-04 08:54:46,081 [wrapper] pandaids: 6677921325
[2025-06-04 10:54:46] 2025-06-04 08:54:46,104 [wrapper] cleanup supervisor_pilot 2313333 2276854
[2025-06-04 10:54:46] 2025-06-04 08:54:46,108 [wrapper] Test setup, not cleaning
[2025-06-04 10:54:46] 2025-06-04 08:54:46,111 [wrapper] apfmon messages muted
[2025-06-04 10:54:46] 2025-06-04 08:54:46,114 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:54:46] 2025-06-04 08:54:46,117 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:54:46]  *** Error codes and diagnostics ***
[2025-06-04 10:54:46]     "exeErrorCode": 0,
[2025-06-04 10:54:46]     "exeErrorDiag": "",
[2025-06-04 10:54:46]     "pilotErrorCode": 0,
[2025-06-04 10:54:46]     "pilotErrorDiag": "",
[2025-06-04 10:54:46]  *** Listing of results directory ***
[2025-06-04 10:54:46] total 384488
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:32 queuedata.json
[2025-06-04 10:54:46] -rwx------ 1 boinc boinc     37140 Jun  3 20:33 runpilot2-wrapper.sh
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:54:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:25 run_atlas
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:25 job.xml
[2025-06-04 10:54:46] -rw-r--r-- 2 boinc boinc 213325777 Jun  4 09:25 EVNT.45006593._001706.pool.root.1
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc      6931 Jun  4 09:25 init_data.xml
[2025-06-04 10:54:46] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:25 shared
[2025-06-04 10:54:46] -rw-r--r-- 2 boinc boinc    508875 Jun  4 09:25 input.tar.gz
[2025-06-04 10:54:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:25 start_atlas.sh
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:25 boinc_lockfile
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:25 pandaJob.out
[2025-06-04 10:54:46] -rw------- 1 boinc boinc    986745 Jun  4 09:25 agis_schedconf.cvmfs.json
[2025-06-04 10:54:46] -rw------- 1 boinc boinc   1603667 Jun  4 09:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:54:46] drwx------ 4 boinc boinc      4096 Jun  4 09:25 pilot3
[2025-06-04 10:54:46] -rw------- 1 boinc boinc 175054930 Jun  4 10:53 HITS.45006595._042536.pool.root.1
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc       528 Jun  4 10:54 boinc_task_state.xml
[2025-06-04 10:54:46] -rw------- 1 boinc boinc      1016 Jun  4 10:54 memory_monitor_summary.json
[2025-06-04 10:54:46] -rw------- 1 boinc boinc    235168 Jun  4 10:54 log.45006595._042536.job.log.tgz.1
[2025-06-04 10:54:46] -rw------- 1 boinc boinc        95 Jun  4 10:54 pilot_heartbeat.json
[2025-06-04 10:54:46] -rw------- 1 boinc boinc      7660 Jun  4 10:54 heartbeat.json
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:54 boinc_mmap_file
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc        26 Jun  4 10:54 wrapper_checkpoint.txt
[2025-06-04 10:54:46] -rw------- 1 boinc boinc      4552 Jun  4 10:54 pilotlog.txt
[2025-06-04 10:54:46] -rw------- 1 boinc boinc    511862 Jun  4 10:54 log.45006595._042536.job.log.1
[2025-06-04 10:54:46] -rw------- 1 boinc boinc       357 Jun  4 10:54 output.list
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:54 runtime_log
[2025-06-04 10:54:46] -rw------- 1 boinc boinc    768000 Jun  4 10:54 result.tar.gz
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc      8748 Jun  4 10:54 runtime_log.err
[2025-06-04 10:54:46] -rw------- 1 boinc boinc       663 Jun  4 10:54 ZOpKDmGdlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnilKDmSyahJn.diag
[2025-06-04 10:54:46] -rw-r--r-- 1 boinc boinc     22505 Jun  4 10:54 stderr.txt
[2025-06-04 10:54:46] HITS file was successfully produced:
[2025-06-04 10:54:46] -rw------- 1 boinc boinc 175054930 Jun  4 10:53 shared/HITS.pool.root.1
[2025-06-04 10:54:46]  *** Contents of shared directory: ***
[2025-06-04 10:54:46] total 380560
[2025-06-04 10:54:46] -rw-r--r-- 2 boinc boinc 213325777 Jun  4 09:25 ATLAS.root_0
[2025-06-04 10:54:46] -rw-r--r-- 2 boinc boinc    508875 Jun  4 09:25 input.tar.gz
[2025-06-04 10:54:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:25 start_atlas.sh
[2025-06-04 10:54:46] -rw------- 1 boinc boinc 175054930 Jun  4 10:53 HITS.pool.root.1
[2025-06-04 10:54:46] -rw------- 1 boinc boinc    768000 Jun  4 10:54 result.tar.gz
10:54:47 (2273202): run_atlas exited; CPU time 15261.093338
10:54:47 (2273202): called boinc_finish(0)

</stderr_txt>
]]>

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