Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:31 (854597): wrapper (7.7.26015): starting
14:48:31 (854597): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 14:48:31] Arguments: --nthreads 12
[2025-06-03 14:48:31] Threads: 12
[2025-06-03 14:48:31] Checking for CVMFS
[2025-06-03 14:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:48:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:48:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:48:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:48:31] 2.11.5.0 1978718 22759 227316 146757 1 337 23426112 45568000 18536 130560 0 185457820 99.781 123624017 26081 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 14:48:31] CVMFS is ok
[2025-06-03 14:48:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:48:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:48:31] Further information can be found at the LHC@home message board.
[2025-06-03 14:48:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:48:31] Checking for apptainer binary...
[2025-06-03 14:48:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:48:31] Running /usr/bin/apptainer --version
[2025-06-03 14:48:32] apptainer version 1.4.0-1.el9
[2025-06-03 14:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:48:32] wns0108.triumf.lcg
[2025-06-03 14:48:32] apptainer works
[2025-06-03 14:48:32] Set ATHENA_PROC_NUMBER=12
[2025-06-03 14:48:32] Set ATHENA_CORE_NUMBER=12
[2025-06-03 14:48:32] Starting ATLAS job with PandaID=6678016541
[2025-06-03 14:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:52:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | found no stored workdir sizes
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | WARNING  | wrong length of table data, x=[1748987353.0], y=[858.0] (must be same and length>=4)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | could have reported an average CPU frequency of 2062 MHz (4 samples)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | ..............................
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . Timing measurements:
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . get job = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . initial setup = 3 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . payload setup = 6 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . stage-in = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . payload execution = 21 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . stage-out = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . log creation = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | ..............................
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678016541/pilotlog.txt
[2025-06-03 14:52:08] 2025-06-03 21:51:35,191 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 14:52:08] - Log from pilotlog.txt -
[2025-06-03 14:52:08] 2025-06-03 21:51:35,172 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:52:08] 2025-06-03 21:51:35,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | found no stored workdir sizes
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | WARNING  | wrong length of table data, x=[1748987353.0], y=[858.0] (must be same and length>=4)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | could have reported an average CPU frequency of 2062 MHz (4 samples)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | ..............................
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . Timing measurements:
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . get job = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . initial setup = 3 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . payload setup = 6 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . stage-in = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . payload execution = 21 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . stage-out = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . log creation = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | ..............................
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678016541/pilotlog.txt
[2025-06-03 14:52:08] 2025-06-03 21:51:35,191 | WARNING  | 
[2025-06-03 14:52:08] [begin log extracts]
[2025-06-03 14:52:08] - Log from pilotlog.txt -
[2025-06-03 14:52:08] 2025-06-03 21:51:35,172 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:52:08] 2025-06-03 21:51:35,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | WARNING  | found no stored workdir sizes
[2025-06-03 14:52:08] 2025-06-03 21:51:35,173 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | WARNING  | wrong length of table data, x=[1748987353.0], y=[858.0] (must be same and length>=4)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | could have reported an average CPU frequency of 2062 MHz (4 samples)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | ..............................
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . Timing measurements:
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . get job = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . initial setup = 3 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . payload setup = 6 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . stage-in = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . payload execution = 21 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . stage-out = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,174 | INFO     | . log creation = 0 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | ..............................
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:52:08] 2025-06-03 21:51:35,175 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678016541/pilotlog.txt
[2025-06-03 14:52:08] [end log extracts]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,192 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,193 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 14:52:08] 2025-06-03 21:51:35,458 | INFO     | 
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | job summary report
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | --------------------------------------------------
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | PanDA job id: 6678016541
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | task id: 45006595
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 14:49:23,986 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | pilot state: failed 
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | transexitcode: 65
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | exeerrorcode: 65
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,459 | INFO     | exitcode: 65
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | cpuconsumptiontime: 21 s
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | nevents: 0
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | neventsw: 0
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | pid: 864510
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | pgrp: 864510
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | corecount: 12
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | event service: False
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | sizes: {0: 2405348, 1: 2405547, 5: 2405809, 11: 2405865, 31: 2429140, 32: 2429116, 33: 2433507, 36: 2433563, 155: 2433729}
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | --------------------------------------------------
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | 
[2025-06-03 14:52:08] 2025-06-03 21:51:35,460 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 14:52:08] 2025-06-03 21:51:35,483 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:52:08] 2025-06-03 21:51:35,485 | INFO     | job 6678016541 has completed (purged errors)
[2025-06-03 14:52:08] 2025-06-03 21:51:35,486 | INFO     | overall cleanup function is called
[2025-06-03 14:52:08] 2025-06-03 21:51:36,491 | INFO     | --- collectZombieJob: --- 10, [864510]
[2025-06-03 14:52:08] 2025-06-03 21:51:36,491 | INFO     | zombie collector waiting for pid 864510
[2025-06-03 14:52:08] 2025-06-03 21:51:36,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:52:08] 2025-06-03 21:51:36,492 | INFO     | collected zombie processes
[2025-06-03 14:52:08] 2025-06-03 21:51:36,492 | INFO     | will attempt to kill all subprocesses of pid=864510
[2025-06-03 14:52:08] 2025-06-03 21:51:36,739 | INFO     | process IDs to be killed: [864510] (in reverse order)
[2025-06-03 14:52:08] 2025-06-03 21:51:36,829 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:52:08] 2025-06-03 21:51:36,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:52:08] 2025-06-03 21:51:36,843 | INFO     | did not find any defunct processes belonging to 864510
[2025-06-03 14:52:08] 2025-06-03 21:51:36,853 | INFO     | did not find any defunct processes belonging to 864510
[2025-06-03 14:52:08] 2025-06-03 21:51:36,853 | INFO     | ready for new job
[2025-06-03 14:52:08] 2025-06-03 21:51:36,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:52:08] 2025-06-03 21:51:36,855 | INFO     | ***************************************
[2025-06-03 14:52:08] 2025-06-03 21:51:36,855 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 14:52:08] 2025-06-03 21:51:36,855 | INFO     | ***************************************
[2025-06-03 14:52:08] 2025-06-03 21:51:36,856 | INFO     | 
[2025-06-03 14:52:08] 2025-06-03 21:51:36,858 | INFO     | architecture information:
[2025-06-03 14:52:08] 2025-06-03 21:51:36,858 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:52:08] 2025-06-03 21:51:36,871 | INFO     | cat /etc/os-release:
[2025-06-03 14:52:08] NAME="CentOS Linux"
[2025-06-03 14:52:08] VERSION="7 (Core)"
[2025-06-03 14:52:08] ID="centos"
[2025-06-03 14:52:08] ID_LIKE="rhel fedora"
[2025-06-03 14:52:08] VERSION_ID="7"
[2025-06-03 14:52:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:52:08] ANSI_COLOR="0;31"
[2025-06-03 14:52:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:52:08] HOME_URL="https://www.centos.org/"
[2025-06-03 14:52:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:52:08] 
[2025-06-03 14:52:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:52:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:52:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:52:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:52:08] 
[2025-06-03 14:52:08] 2025-06-03 21:51:36,871 | INFO     | ***************************************
[2025-06-03 14:52:08] 2025-06-03 21:51:37,374 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 14:52:08] 2025-06-03 21:51:37,394 | INFO     | sufficient remaining disk space (1110185082880 B)
[2025-06-03 14:52:08] 2025-06-03 21:51:37,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:52:08] 2025-06-03 21:51:37,394 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:52:08] 2025-06-03 21:51:37,395 | INFO     | update_server=False
[2025-06-03 14:52:08] 2025-06-03 21:51:37,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:52:08] 2025-06-03 21:51:37,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:52:08] 2025-06-03 21:51:37,396 | INFO     | aborting loop
[2025-06-03 14:52:08] 2025-06-03 21:51:38,075 | INFO     | all job control threads have been joined
[2025-06-03 14:52:08] 2025-06-03 21:51:38,400 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:38,401 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:38,437 | INFO     | all data control threads have been joined
[2025-06-03 14:52:08] 2025-06-03 21:51:38,537 | INFO     | all payload control threads have been joined
[2025-06-03 14:52:08] 2025-06-03 21:51:38,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:52:08] 2025-06-03 21:51:38,597 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:38,598 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:38,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:52:08] 2025-06-03 21:51:38,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,080 | INFO     | [job] control thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,110 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,260 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,442 | INFO     | [data] control thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,542 | INFO     | [payload] control thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,594 | INFO     | [job] validate thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,745 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:39,888 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:40,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:52:08] 2025-06-03 21:51:40,551 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:41,288 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:42,674 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:52:08] 2025-06-03 21:51:42,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637000808256)>', '<ExcThread(monitor, started 139635996997376)>']
[2025-06-03 14:52:08] 2025-06-03 21:51:47,786 | INFO     | all workflow threads have been joined
[2025-06-03 14:52:08] 2025-06-03 21:51:47,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:52:08] 2025-06-03 21:51:47,788 | INFO     | traces error code: 0
[2025-06-03 14:52:08] 2025-06-03 21:51:47,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:52:08] 2025-06-03 21:52:07,704 | INFO     | PID=858172 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 14:52:08] 2025-06-03 21:52:07,704 | INFO     | .. there are 28 such processes running
[2025-06-03 14:52:08] 2025-06-03 21:52:07,705 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:52:08] 2025-06-03 21:52:07,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:52:08] 2025-06-03 21:52:07,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:52:08] 2025-06-03 21:52:07,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:52:08] 2025-06-03 21:52:07,705 | INFO     | [monitor] control thread has ended
[2025-06-03 14:52:08] 2025-06-03 21:52:07,858 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:52:08] 2025-06-03 21:52:07,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:52:08] 2025-06-03 21:52:07,864 [wrapper] pilotpid: 858172
[2025-06-03 14:52:08] 2025-06-03 21:52:07,866 [wrapper] Pilot exit status: 0
[2025-06-03 14:52:08] 2025-06-03 21:52:07,878 [wrapper] pandaids: 6678016541
[2025-06-03 14:52:08] 2025-06-03 21:52:07,935 [wrapper] cleanup supervisor_pilot  858178 858173
[2025-06-03 14:52:08] 2025-06-03 21:52:07,938 [wrapper] Test setup, not cleaning
[2025-06-03 14:52:08] 2025-06-03 21:52:07,941 [wrapper] apfmon messages muted
[2025-06-03 14:52:08] 2025-06-03 21:52:07,945 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:52:08] 2025-06-03 21:52:07,949 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:52:08]  *** Error codes and diagnostics ***
[2025-06-03 14:52:08]     "exeErrorCode": 65,
[2025-06-03 14:52:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 14:52:08]     "pilotErrorCode": 1305,
[2025-06-03 14:52:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 14:52:08]  *** Listing of results directory ***
[2025-06-03 14:52:08] total 214956
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:06 queuedata.json
[2025-06-03 14:52:08] -rwx------. 1 boinc boinc     37140 Jun  3 13:10 runpilot2-wrapper.sh
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:52:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:48 run_atlas
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:48 job.xml
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc      6597 Jun  3 14:48 init_data.xml
[2025-06-03 14:52:08] -rw-r--r--. 2 boinc boinc 215971290 Jun  3 14:48 EVNT.45006593._001792.pool.root.1
[2025-06-03 14:52:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:48 start_atlas.sh
[2025-06-03 14:52:08] drwxrwx--x. 2 boinc boinc      4096 Jun  3 14:48 shared
[2025-06-03 14:52:08] -rw-r--r--. 2 boinc boinc    564120 Jun  3 14:48 input.tar.gz
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:48 boinc_lockfile
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc      2523 Jun  3 14:48 pandaJob.out
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc    986869 Jun  3 14:48 agis_schedconf.cvmfs.json
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc   1603667 Jun  3 14:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:52:08] drwx------. 6 boinc boinc      4096 Jun  3 14:48 pilot3
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc       522 Jun  3 14:49 boinc_task_state.xml
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc       978 Jun  3 14:49 memory_monitor_summary.json
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc     20723 Jun  3 14:49 log.45006595._044667.job.log.tgz.1
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc      8368 Jun  3 14:51 heartbeat.json
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc        95 Jun  3 14:52 pilot_heartbeat.json
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc       822 Jun  3 14:52 pilotlog.txt
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc     79469 Jun  3 14:52 log.45006595._044667.job.log.1
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc       188 Jun  3 14:52 output.list
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:52 boinc_mmap_file
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:52 runtime_log
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc    122880 Jun  3 14:52 result.tar.gz
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc      8484 Jun  3 14:52 runtime_log.err
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc       647 Jun  3 14:52 1eSMDm08mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoqZKDmykUFUm.diag
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc        22 Jun  3 14:52 wrapper_checkpoint.txt
[2025-06-03 14:52:08] -rw-r--r--. 1 boinc boinc     21654 Jun  3 14:52 stderr.txt
[2025-06-03 14:52:08] No HITS result produced
[2025-06-03 14:52:08]  *** Contents of shared directory: ***
[2025-06-03 14:52:08] total 211604
[2025-06-03 14:52:08] -rw-r--r--. 2 boinc boinc 215971290 Jun  3 14:48 ATLAS.root_0
[2025-06-03 14:52:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:48 start_atlas.sh
[2025-06-03 14:52:08] -rw-r--r--. 2 boinc boinc    564120 Jun  3 14:48 input.tar.gz
[2025-06-03 14:52:08] -rw-------. 1 boinc boinc    122880 Jun  3 14:52 result.tar.gz
14:52:10 (854597): run_atlas exited; CPU time 25.980408
14:52:10 (854597): called boinc_finish(0)

</stderr_txt>
]]>

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