Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:06:28 (27511): wrapper (7.7.26015): starting
09:06:28 (27511): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 09:06:28] Arguments: --nthreads 3
[2025-06-04 09:06:28] Threads: 3
[2025-06-04 09:06:28] Checking for CVMFS
[2025-06-04 09:06:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:06:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:06:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:06:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:06:29] 2.9.2.0 3016 70 50780 146771 1 56 30344213 36864001 0 130560 0 66656 99.997 2593 7515 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 09:06:29] CVMFS is ok
[2025-06-04 09:06:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:06:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:06:29] Further information can be found at the LHC@home message board.
[2025-06-04 09:06:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:06:29] Checking for apptainer binary...
[2025-06-04 09:06:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:06:29] Running /usr/bin/apptainer --version
[2025-06-04 09:06:29] apptainer version 1.3.6-6.1
[2025-06-04 09:06:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:06:29] magicA252
[2025-06-04 09:06:29] apptainer works
[2025-06-04 09:06:29] Set ATHENA_PROC_NUMBER=3
[2025-06-04 09:06:29] Set ATHENA_CORE_NUMBER=3
[2025-06-04 09:06:29] Starting ATLAS job with PandaID=6677920005
[2025-06-04 09:06:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:17:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:17:16]  lfn=log.45006595._041931.job.log.tgz.1
[2025-06-04 10:17:16]  mtime=0
[2025-06-04 10:17:16]  protocol_id=None
[2025-06-04 10:17:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:17:16]  replicas=None
[2025-06-04 10:17:16]  scope=mc23_13p6TeV
[2025-06-04 10:17:16]  status=None
[2025-06-04 10:17:16]  status_code=0
[2025-06-04 10:17:16]  storage_token=
[2025-06-04 10:17:16]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677920005/log.45006595._041931.job.log.tgz.1
[2025-06-04 10:17:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/46/log.45006595._041931.job.log.tgz.1
[2025-06-04 10:17:16]  workdir=None
[2025-06-04 10:17:16] ]
[2025-06-04 10:17:16] 2025-06-04 08:16:48,263 | INFO     | transferring file log.45006595._041931.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677920005/log.45006595._041931.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 10:17:16] 2025-06-04 08:16:48,263 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677920005/log.45006595._041931.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0419
[2025-06-04 10:17:16] 2025-06-04 08:16:48,275 | INFO     | adding to output.list: log.45006595._041931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/46/log.45006595._041931.job.log.tg
[2025-06-04 10:17:16] 2025-06-04 08:16:48,276 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:17:16] 2025-06-04 08:16:48,276 | INFO     | summary of transferred files:
[2025-06-04 10:17:16] 2025-06-04 08:16:48,276 | INFO     |  -- lfn=log.45006595._041931.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:17:16] 2025-06-04 08:16:48,276 | INFO     | stage-out finished correctly
[2025-06-04 10:17:16] 2025-06-04 08:16:51,466 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:17:16] 2025-06-04 08:16:53,867 | WARNING  | process 37639 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:17:16] 2025-06-04 08:16:53,867 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920005/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:17:16] 2025-06-04 08:16:53,901 | INFO     | number of running child processes to parent process 37639: 1
[2025-06-04 10:17:16] 2025-06-04 08:16:53,901 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:17:16] 2025-06-04 08:16:54,427 | INFO     | job 6677920005 has state=finished
[2025-06-04 10:17:16] 2025-06-04 08:16:54,427 | INFO     | preparing for final server update for job 6677920005 in state='finished'
[2025-06-04 10:17:16] 2025-06-04 08:16:54,427 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:17:16] 2025-06-04 08:16:54,427 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:17:16] 2025-06-04 08:16:54,427 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:17:16] 2025-06-04 08:16:54,427 | INFO     | job 6677920005 has finished - writing final server update
[2025-06-04 10:17:16] 2025-06-04 08:16:54,428 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:17:16] 2025-06-04 08:16:54,429 | INFO     | executing command: lscpu
[2025-06-04 10:17:16] 2025-06-04 08:16:54,445 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:17:16] 2025-06-04 08:16:55,707 | INFO     | 4222s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 10:17:16] 2025-06-04 08:16:56,404 | INFO     | monitor loop #326: job 0:6677920005 is in state 'finished'
[2025-06-04 10:17:16] 2025-06-04 08:16:56,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:17:16] 2025-06-04 08:16:56,765 | INFO     | PID=31144 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920005/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | INFO     | extracted standard info from prmon json
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:17:16] 2025-06-04 08:16:56,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | sum of deviations: -2815142253.0
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | mean x: 1749022980.5
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | mean y: 2392574.0967741935
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | -- intersect: 66645519018.52371
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | intersect: 66645519018.52371
[2025-06-04 10:17:16] 2025-06-04 08:16:56,858 | INFO     | chi2: 0.061189117579934886
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | -- intersect: 66645519018.52371
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | current memory leak: -38.10 B/s (using 62 data points, chi2=0.06)
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | ..............................
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . Timing measurements:
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . get job = 0 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . initial setup = 1 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . payload setup = 3 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . stage-in = 0 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . payload execution = 4193 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . stage-out = 0 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | . log creation = 0 s
[2025-06-04 10:17:16] 2025-06-04 08:16:56,859 | INFO     | ..............................
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | 
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | job summary report
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | --------------------------------------------------
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | PanDA job id: 6677920005
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | task id: 45006595
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | errors: (none)
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | pilot state: finished 
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | transexitcode: 0
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | exeerrorcode: 0
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | exeerrordiag: 
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | exitcode: 0
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | exitmsg: OK
[2025-06-04 10:17:16] 2025-06-04 08:16:57,051 | INFO     | cpuconsumptiontime: 11968 s
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | nevents: 400
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | neventsw: 0
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | pid: 37639
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | pgrp: 37639
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | corecount: 3
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | event service: False
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | sizes: {0: 2405187, 1: 2405187, 3: 2405421, 11: 2405449, 4201: 2440416, 4204: 2440416, 4209: 2440714}
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | --------------------------------------------------
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | 
[2025-06-04 10:17:16] 2025-06-04 08:16:57,052 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 10:17:16] 2025-06-04 08:16:57,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | job 6677920005 has completed (purged errors)
[2025-06-04 10:17:16] 2025-06-04 08:16:57,068 | INFO     | overall cleanup function is called
[2025-06-04 10:17:16] 2025-06-04 08:16:58,071 | INFO     | --- collectZombieJob: --- 10, [37639]
[2025-06-04 10:17:16] 2025-06-04 08:16:58,071 | INFO     | zombie collector waiting for pid 37639
[2025-06-04 10:17:16] 2025-06-04 08:16:58,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:17:16] 2025-06-04 08:16:58,071 | INFO     | collected zombie processes
[2025-06-04 10:17:16] 2025-06-04 08:16:58,072 | INFO     | will attempt to kill all subprocesses of pid=37639
[2025-06-04 10:17:16] 2025-06-04 08:16:58,112 | INFO     | process IDs to be killed: [37639] (in reverse order)
[2025-06-04 10:17:16] 2025-06-04 08:16:58,137 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:17:16] 2025-06-04 08:16:58,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:17:16] 2025-06-04 08:16:58,138 | INFO     | did not find any defunct processes belonging to 37639
[2025-06-04 10:17:16] 2025-06-04 08:16:58,139 | INFO     | did not find any defunct processes belonging to 37639
[2025-06-04 10:17:16] 2025-06-04 08:16:58,139 | INFO     | ready for new job
[2025-06-04 10:17:16] 2025-06-04 08:16:58,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:17:16] 2025-06-04 08:16:58,140 | INFO     | **************************************
[2025-06-04 10:17:16] 2025-06-04 08:16:58,140 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:17:16] 2025-06-04 08:16:58,140 | INFO     | **************************************
[2025-06-04 10:17:16] 2025-06-04 08:16:58,140 | INFO     | 
[2025-06-04 10:17:16] 2025-06-04 08:16:58,140 | INFO     | architecture information:
[2025-06-04 10:17:16] 2025-06-04 08:16:58,141 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:17:16] 2025-06-04 08:16:58,150 | INFO     | cat /etc/os-release:
[2025-06-04 10:17:16] NAME="CentOS Linux"
[2025-06-04 10:17:16] VERSION="7 (Core)"
[2025-06-04 10:17:16] ID="centos"
[2025-06-04 10:17:16] ID_LIKE="rhel fedora"
[2025-06-04 10:17:16] VERSION_ID="7"
[2025-06-04 10:17:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:17:16] ANSI_COLOR="0;31"
[2025-06-04 10:17:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:17:16] HOME_URL="https://www.centos.org/"
[2025-06-04 10:17:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:17:16] 
[2025-06-04 10:17:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:17:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:17:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:17:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:17:16] 
[2025-06-04 10:17:16] 2025-06-04 08:16:58,150 | INFO     | **************************************
[2025-06-04 10:17:16] 2025-06-04 08:16:58,653 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 10:17:16] 2025-06-04 08:16:58,666 | INFO     | sufficient remaining disk space (369992138752 B)
[2025-06-04 10:17:16] 2025-06-04 08:16:58,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:17:16] 2025-06-04 08:16:58,666 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:17:16] 2025-06-04 08:16:58,666 | INFO     | update_server=False
[2025-06-04 10:17:16] 2025-06-04 08:16:58,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:17:16] 2025-06-04 08:16:58,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:17:16] 2025-06-04 08:16:58,771 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:17:16] 2025-06-04 08:16:58,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:17:16] 2025-06-04 08:16:58,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:17:16] 2025-06-04 08:16:58,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:17:16] 2025-06-04 08:16:58,897 | INFO     | all job control threads have been joined
[2025-06-04 10:17:16] 2025-06-04 08:16:58,899 | INFO     | all data control threads have been joined
[2025-06-04 10:17:16] 2025-06-04 08:16:58,908 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:17:16] 2025-06-04 08:16:58,908 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:17:16] 2025-06-04 08:16:58,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:17:16] 2025-06-04 08:16:58,908 | INFO     | will abort loop
[2025-06-04 10:17:16] 2025-06-04 08:16:59,567 | INFO     | all payload control threads have been joined
[2025-06-04 10:17:16] 2025-06-04 08:16:59,669 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:16:59,672 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:16:59,738 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:16:59,799 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:16:59,903 | INFO     | [job] control thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:16:59,904 | INFO     | [data] control thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:16:59,913 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:00,223 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:00,569 | INFO     | [payload] control thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:00,828 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:00,843 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:00,995 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:01,081 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:01,138 | INFO     | [job] validate thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:02,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:17:16] 2025-06-04 08:17:06,017 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:09,638 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:17:16] 2025-06-04 08:17:10,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:17:16] 2025-06-04 08:17:11,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743200831296)>', '<ExcThread(monitor, started 139742708483840)>']
[2025-06-04 10:17:16] 2025-06-04 08:17:11,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:17:16] 2025-06-04 08:17:11,840 | INFO     | [monitor] control thread has ended
[2025-06-04 10:17:16] 2025-06-04 08:17:16,387 | INFO     | all workflow threads have been joined
[2025-06-04 10:17:16] 2025-06-04 08:17:16,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:17:16] 2025-06-04 08:17:16,387 | INFO     | traces error code: 0
[2025-06-04 10:17:16] 2025-06-04 08:17:16,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:17:16] 2025-06-04 08:17:16,440 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:17:16] 2025-06-04 08:17:16,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:17:16] 2025-06-04 08:17:16,444 [wrapper] pilotpid: 31144
[2025-06-04 10:17:16] 2025-06-04 08:17:16,447 [wrapper] Pilot exit status: 0
[2025-06-04 10:17:16] 2025-06-04 08:17:16,454 [wrapper] pandaids: 6677920005
[2025-06-04 10:17:16] 2025-06-04 08:17:16,471 [wrapper] cleanup supervisor_pilot   47090 31145
[2025-06-04 10:17:16] 2025-06-04 08:17:16,473 [wrapper] Test setup, not cleaning
[2025-06-04 10:17:16] 2025-06-04 08:17:16,476 [wrapper] apfmon messages muted
[2025-06-04 10:17:16] 2025-06-04 08:17:16,478 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:17:16] 2025-06-04 08:17:16,480 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:17:16]  *** Error codes and diagnostics ***
[2025-06-04 10:17:16]     "exeErrorCode": 0,
[2025-06-04 10:17:16]     "exeErrorDiag": "",
[2025-06-04 10:17:16]     "pilotErrorCode": 0,
[2025-06-04 10:17:16]     "pilotErrorDiag": "",
[2025-06-04 10:17:16]  *** Listing of results directory ***
[2025-06-04 10:17:16] total 386968
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:13 queuedata.json
[2025-06-04 10:17:16] -rwx------ 1 boinc boinc     37140 Jun  3 20:16 runpilot2-wrapper.sh
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:17:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:06 run_atlas
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:06 job.xml
[2025-06-04 10:17:16] -rw-r--r-- 2 boinc boinc 214929446 Jun  4 09:06 EVNT.45006593._001682.pool.root.1
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc      6931 Jun  4 09:06 init_data.xml
[2025-06-04 10:17:16] -rw-r--r-- 2 boinc boinc    508887 Jun  4 09:06 input.tar.gz
[2025-06-04 10:17:16] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:06 start_atlas.sh
[2025-06-04 10:17:16] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:06 shared
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:06 boinc_lockfile
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:06 pandaJob.out
[2025-06-04 10:17:16] -rw------- 1 boinc boinc    986745 Jun  4 09:06 agis_schedconf.cvmfs.json
[2025-06-04 10:17:16] -rw------- 1 boinc boinc   1603667 Jun  4 09:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:17:16] drwx------ 4 boinc boinc      4096 Jun  4 09:06 pilot3
[2025-06-04 10:17:16] -rw------- 1 boinc boinc 176211166 Jun  4 10:16 HITS.45006595._041931.pool.root.1
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:16 boinc_task_state.xml
[2025-06-04 10:17:16] -rw------- 1 boinc boinc      1033 Jun  4 10:16 memory_monitor_summary.json
[2025-06-04 10:17:16] -rw------- 1 boinc boinc    221288 Jun  4 10:16 log.45006595._041931.job.log.tgz.1
[2025-06-04 10:17:16] -rw------- 1 boinc boinc        95 Jun  4 10:16 pilot_heartbeat.json
[2025-06-04 10:17:16] -rw------- 1 boinc boinc      7656 Jun  4 10:16 heartbeat.json
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:16 wrapper_checkpoint.txt
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:16 boinc_mmap_file
[2025-06-04 10:17:16] -rw------- 1 boinc boinc      4615 Jun  4 10:17 pilotlog.txt
[2025-06-04 10:17:16] -rw------- 1 boinc boinc    416964 Jun  4 10:17 log.45006595._041931.job.log.1
[2025-06-04 10:17:16] -rw------- 1 boinc boinc       357 Jun  4 10:17 output.list
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:17 runtime_log
[2025-06-04 10:17:16] -rw------- 1 boinc boinc    655360 Jun  4 10:17 result.tar.gz
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc      8748 Jun  4 10:17 runtime_log.err
[2025-06-04 10:17:16] -rw------- 1 boinc boinc       661 Jun  4 10:17 ld0MDmIMlg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXXZKDmbpaTyn.diag
[2025-06-04 10:17:16] -rw-r--r-- 1 boinc boinc     21605 Jun  4 10:17 stderr.txt
[2025-06-04 10:17:16] HITS file was successfully produced:
[2025-06-04 10:17:16] -rw------- 1 boinc boinc 176211166 Jun  4 10:16 shared/HITS.pool.root.1
[2025-06-04 10:17:16]  *** Contents of shared directory: ***
[2025-06-04 10:17:16] total 383144
[2025-06-04 10:17:16] -rw-r--r-- 2 boinc boinc 214929446 Jun  4 09:06 ATLAS.root_0
[2025-06-04 10:17:16] -rw-r--r-- 2 boinc boinc    508887 Jun  4 09:06 input.tar.gz
[2025-06-04 10:17:16] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:06 start_atlas.sh
[2025-06-04 10:17:16] -rw------- 1 boinc boinc 176211166 Jun  4 10:16 HITS.pool.root.1
[2025-06-04 10:17:16] -rw------- 1 boinc boinc    655360 Jun  4 10:17 result.tar.gz
10:17:18 (27511): run_atlas exited; CPU time 11975.773217
10:17:18 (27511): called boinc_finish(0)

</stderr_txt>
]]>

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