Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:50:25 (3359807): wrapper (7.7.26015): starting
14:50:25 (3359807): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:50:25] Arguments: --nthreads 8
[2025-06-03 14:50:25] Threads: 8
[2025-06-03 14:50:25] Checking for CVMFS
[2025-06-03 14:50:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:50:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:50:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:50:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:50:26] 2.11.3.0 153215 401712 209432 146757 3 273 45285370 45568000 11555 130560 0 1831937732 99.758 1497556089 20410 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-06-03 14:50:26] CVMFS is ok
[2025-06-03 14:50:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:50:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:50:26] Further information can be found at the LHC@home message board.
[2025-06-03 14:50:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:50:26] Checking for apptainer binary...
[2025-06-03 14:50:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:50:26] Running /usr/bin/apptainer --version
[2025-06-03 14:50:26] apptainer version 1.3.3-1.el9
[2025-06-03 14:50:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:50:26] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0018.triumf.lcg
[2025-06-03 14:50:26] apptainer works
[2025-06-03 14:50:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:50:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:50:26] Starting ATLAS job with PandaID=6678015336
[2025-06-03 14:50:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:54:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | found no stored workdir sizes
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | WARNING  | wrong length of table data, x=[1748987478.0], y=[1250.0] (must be same and length>=4)
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | INFO     | ..............................
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | INFO     | . Timing measurements:
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . get job = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . initial setup = 4 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . payload setup = 9 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . stage-in = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . payload execution = 36 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . stage-out = 1 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . log creation = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,484 | INFO     | ..............................
[2025-06-03 14:54:12] 2025-06-03 21:53:59,485 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:54:12] 2025-06-03 21:53:59,485 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678015336/pilotlog.txt
[2025-06-03 14:54:12] 2025-06-03 21:53:59,513 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 14:54:12] - Log from pilotlog.txt -
[2025-06-03 14:54:12] 2025-06-03 21:53:59,466 | INFO     | extracted standard info from prmon json
[2025-06-03 14:54:12] 2025-06-03 21:53:59,466 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | found no stored workdir sizes
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | WARNING  | wrong length of table data, x=[1748987478.0], y=[1250.0] (must be same and length>=4)
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | INFO     | ..............................
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | INFO     | . Timing measurements:
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . get job = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . initial setup = 4 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . payload setup = 9 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . stage-in = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . payload execution = 36 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . stage-out = 1 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . log creation = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,484 | INFO     | ..............................
[2025-06-03 14:54:12] 2025-06-03 21:53:59,485 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:54:12] 2025-06-03 21:53:59,485 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678015336/pilotlog.txt
[2025-06-03 14:54:12] 2025-06-03 21:53:59,513 | WARNING  | 
[2025-06-03 14:54:12] [begin log extracts]
[2025-06-03 14:54:12] - Log from pilotlog.txt -
[2025-06-03 14:54:12] 2025-06-03 21:53:59,466 | INFO     | extracted standard info from prmon json
[2025-06-03 14:54:12] 2025-06-03 21:53:59,466 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | WARNING  | found no stored workdir sizes
[2025-06-03 14:54:12] 2025-06-03 21:53:59,467 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | WARNING  | wrong length of table data, x=[1748987478.0], y=[1250.0] (must be same and length>=4)
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | INFO     | ..............................
[2025-06-03 14:54:12] 2025-06-03 21:53:59,468 | INFO     | . Timing measurements:
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . get job = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . initial setup = 4 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . payload setup = 9 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . stage-in = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . payload execution = 36 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . stage-out = 1 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,469 | INFO     | . log creation = 0 s
[2025-06-03 14:54:12] 2025-06-03 21:53:59,484 | INFO     | ..............................
[2025-06-03 14:54:12] 2025-06-03 21:53:59,485 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:54:12] 2025-06-03 21:53:59,485 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678015336/pilotlog.txt
[2025-06-03 14:54:12] [end log extracts]
[2025-06-03 14:54:12] 2025-06-03 21:53:59,514 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 14:54:12] 2025-06-03 21:53:59,514 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 14:54:12] 2025-06-03 21:54:00,220 | INFO     | 
[2025-06-03 14:54:12] 2025-06-03 21:54:00,220 | INFO     | job summary report
[2025-06-03 14:54:12] 2025-06-03 21:54:00,220 | INFO     | --------------------------------------------------
[2025-06-03 14:54:12] 2025-06-03 21:54:00,220 | INFO     | PanDA job id: 6678015336
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | task id: 45006595
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 14:51:39,945 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | pilot state: failed 
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | transexitcode: 65
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | exeerrorcode: 65
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | exitcode: 65
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | cpuconsumptiontime: 16 s
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | nevents: 0
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | neventsw: 0
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | pid: 3369705
[2025-06-03 14:54:12] 2025-06-03 21:54:00,221 | INFO     | pgrp: 3369705
[2025-06-03 14:54:12] 2025-06-03 21:54:00,222 | INFO     | corecount: 8
[2025-06-03 14:54:12] 2025-06-03 21:54:00,222 | INFO     | event service: False
[2025-06-03 14:54:12] 2025-06-03 21:54:00,222 | INFO     | sizes: {0: 2405010, 1: 2405209, 9: 2405415, 12: 2405443, 50: 2428556, 52: 2432791, 55: 2432947, 180: 2433089}
[2025-06-03 14:54:12] 2025-06-03 21:54:00,222 | INFO     | --------------------------------------------------
[2025-06-03 14:54:12] 2025-06-03 21:54:00,222 | INFO     | 
[2025-06-03 14:54:12] 2025-06-03 21:54:00,222 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 14:54:12] 2025-06-03 21:54:00,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | job 6678015336 has completed (purged errors)
[2025-06-03 14:54:12] 2025-06-03 21:54:00,331 | INFO     | overall cleanup function is called
[2025-06-03 14:54:12] 2025-06-03 21:54:01,338 | INFO     | --- collectZombieJob: --- 10, [3369705]
[2025-06-03 14:54:12] 2025-06-03 21:54:01,338 | INFO     | zombie collector waiting for pid 3369705
[2025-06-03 14:54:12] 2025-06-03 21:54:01,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:54:12] 2025-06-03 21:54:01,339 | INFO     | collected zombie processes
[2025-06-03 14:54:12] 2025-06-03 21:54:01,339 | INFO     | will attempt to kill all subprocesses of pid=3369705
[2025-06-03 14:54:12] 2025-06-03 21:54:01,518 | INFO     | process IDs to be killed: [3369705] (in reverse order)
[2025-06-03 14:54:12] 2025-06-03 21:54:01,587 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:54:12] 2025-06-03 21:54:01,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:54:12] 2025-06-03 21:54:01,594 | INFO     | did not find any defunct processes belonging to 3369705
[2025-06-03 14:54:12] 2025-06-03 21:54:01,601 | INFO     | did not find any defunct processes belonging to 3369705
[2025-06-03 14:54:12] 2025-06-03 21:54:01,602 | INFO     | ready for new job
[2025-06-03 14:54:12] 2025-06-03 21:54:01,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:54:12] 2025-06-03 21:54:01,603 | INFO     | **************************************
[2025-06-03 14:54:12] 2025-06-03 21:54:01,603 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:54:12] 2025-06-03 21:54:01,603 | INFO     | **************************************
[2025-06-03 14:54:12] 2025-06-03 21:54:01,603 | INFO     | 
[2025-06-03 14:54:12] 2025-06-03 21:54:01,617 | INFO     | architecture information:
[2025-06-03 14:54:12] 2025-06-03 21:54:01,619 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:54:12] 2025-06-03 21:54:01,680 | INFO     | cat /etc/os-release:
[2025-06-03 14:54:12] NAME="CentOS Linux"
[2025-06-03 14:54:12] VERSION="7 (Core)"
[2025-06-03 14:54:12] ID="centos"
[2025-06-03 14:54:12] ID_LIKE="rhel fedora"
[2025-06-03 14:54:12] VERSION_ID="7"
[2025-06-03 14:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:54:12] ANSI_COLOR="0;31"
[2025-06-03 14:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:54:12] HOME_URL="https://www.centos.org/"
[2025-06-03 14:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:54:12] 
[2025-06-03 14:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:54:12] 
[2025-06-03 14:54:12] 2025-06-03 21:54:01,680 | INFO     | **************************************
[2025-06-03 14:54:12] 2025-06-03 21:54:02,184 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 14:54:12] 2025-06-03 21:54:02,362 | INFO     | sufficient remaining disk space (1226628399104 B)
[2025-06-03 14:54:12] 2025-06-03 21:54:02,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:54:12] 2025-06-03 21:54:02,362 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:54:12] 2025-06-03 21:54:02,362 | INFO     | update_server=False
[2025-06-03 14:54:12] 2025-06-03 21:54:02,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:54:12] 2025-06-03 21:54:02,439 | INFO     | all payload control threads have been joined
[2025-06-03 14:54:12] 2025-06-03 21:54:03,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:54:12] 2025-06-03 21:54:03,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:54:12] 2025-06-03 21:54:03,119 | INFO     | aborting loop
[2025-06-03 14:54:12] 2025-06-03 21:54:03,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:54:12] 2025-06-03 21:54:03,208 | INFO     | all data control threads have been joined
[2025-06-03 14:54:12] 2025-06-03 21:54:03,274 | INFO     | all job control threads have been joined
[2025-06-03 14:54:12] 2025-06-03 21:54:03,329 | INFO     | PID=3363378 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 14:54:12] 2025-06-03 21:54:03,330 | INFO     | .. there are 19 such processes running
[2025-06-03 14:54:12] 2025-06-03 21:54:03,330 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:54:12] 2025-06-03 21:54:03,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:54:12] 2025-06-03 21:54:03,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:54:12] 2025-06-03 21:54:03,368 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:03,446 | INFO     | [payload] control thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:03,512 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:03,587 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:03,588 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:03,645 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,125 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,214 | INFO     | [data] control thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,281 | INFO     | [job] control thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,447 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,769 | INFO     | [job] validate thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,800 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,802 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:04,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:54:12] 2025-06-03 21:54:05,066 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:05,817 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:07,152 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:54:12] 2025-06-03 21:54:07,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226448836416)>', '<ExcThread(monitor, started 140225741301504)>']
[2025-06-03 14:54:12] 2025-06-03 21:54:08,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:54:12] 2025-06-03 21:54:08,358 | INFO     | [monitor] control thread has ended
[2025-06-03 14:54:12] 2025-06-03 21:54:12,402 | INFO     | all workflow threads have been joined
[2025-06-03 14:54:12] 2025-06-03 21:54:12,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:54:12] 2025-06-03 21:54:12,403 | INFO     | traces error code: 0
[2025-06-03 14:54:12] 2025-06-03 21:54:12,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:54:12] 2025-06-03 21:54:12,691 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:54:12] 2025-06-03 21:54:12,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:54:12] 2025-06-03 21:54:12,699 [wrapper] pilotpid: 3363378
[2025-06-03 14:54:12] 2025-06-03 21:54:12,704 [wrapper] Pilot exit status: 0
[2025-06-03 14:54:12] 2025-06-03 21:54:12,723 [wrapper] pandaids: 6678015336
[2025-06-03 14:54:12] 2025-06-03 21:54:12,784 [wrapper] cleanup supervisor_pilot 3363384 3363379
[2025-06-03 14:54:12] 2025-06-03 21:54:12,786 [wrapper] Test setup, not cleaning
[2025-06-03 14:54:12] 2025-06-03 21:54:12,788 [wrapper] apfmon messages muted
[2025-06-03 14:54:12] 2025-06-03 21:54:12,790 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:54:12] 2025-06-03 21:54:12,792 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:54:12]  *** Error codes and diagnostics ***
[2025-06-03 14:54:12]     "exeErrorCode": 65,
[2025-06-03 14:54:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 14:54:12]     "pilotErrorCode": 1305,
[2025-06-03 14:54:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 14:54:12]  *** Listing of results directory ***
[2025-06-03 14:54:12] total 214588
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:41 pilot3.tar.gz
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:06 queuedata.json
[2025-06-03 14:54:12] -rwx------. 1 boinc boinc     37140 Jun  3 13:06 runpilot2-wrapper.sh
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:54:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:50 run_atlas
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:50 job.xml
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc      6453 Jun  3 14:50 init_data.xml
[2025-06-03 14:54:12] -rw-r--r--. 2 boinc boinc 215711009 Jun  3 14:50 EVNT.45006593._001781.pool.root.1
[2025-06-03 14:54:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:50 start_atlas.sh
[2025-06-03 14:54:12] drwxrwx--x. 2 boinc boinc      4096 Jun  3 14:50 shared
[2025-06-03 14:54:12] -rw-r--r--. 2 boinc boinc    508876 Jun  3 14:50 input.tar.gz
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:50 boinc_lockfile
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc      2525 Jun  3 14:50 pandaJob.out
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc    986869 Jun  3 14:50 agis_schedconf.cvmfs.json
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc   1603667 Jun  3 14:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:54:12] drwx------. 4 boinc boinc      4096 Jun  3 14:50 pilot3
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc       522 Jun  3 14:51 boinc_task_state.xml
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc       948 Jun  3 14:51 memory_monitor_summary.json
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc     20923 Jun  3 14:51 log.45006595._044453.job.log.tgz.1
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc        95 Jun  3 14:53 pilot_heartbeat.json
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc      8302 Jun  3 14:53 heartbeat.json
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:54 boinc_mmap_file
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc        22 Jun  3 14:54 wrapper_checkpoint.txt
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc      4747 Jun  3 14:54 pilotlog.txt
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc     75120 Jun  3 14:54 log.45006595._044453.job.log.1
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc       188 Jun  3 14:54 output.list
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:54 runtime_log
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc    112640 Jun  3 14:54 result.tar.gz
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc      8647 Jun  3 14:54 runtime_log.err
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc       644 Jun  3 14:54 DHzKDmQ5mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlzlKDmcyhP7n.diag
[2025-06-03 14:54:12] -rw-r--r--. 1 boinc boinc     21726 Jun  3 14:54 stderr.txt
[2025-06-03 14:54:12] No HITS result produced
[2025-06-03 14:54:12]  *** Contents of shared directory: ***
[2025-06-03 14:54:12] total 211288
[2025-06-03 14:54:12] -rw-r--r--. 2 boinc boinc 215711009 Jun  3 14:50 ATLAS.root_0
[2025-06-03 14:54:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:50 start_atlas.sh
[2025-06-03 14:54:12] -rw-r--r--. 2 boinc boinc    508876 Jun  3 14:50 input.tar.gz
[2025-06-03 14:54:12] -rw-------. 1 boinc boinc    112640 Jun  3 14:54 result.tar.gz
14:54:14 (3359807): run_atlas exited; CPU time 23.443448
14:54:14 (3359807): called boinc_finish(0)

</stderr_txt>
]]>

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