Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:08 (31541): wrapper (7.7.26015): starting
07:12:08 (31541): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:12:08] Arguments: --nthreads 8
[2025-06-04 07:12:08] Threads: 8
[2025-06-04 07:12:08] Checking for CVMFS
[2025-06-04 07:12:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:12:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:12:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:12:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:12:11] 2.11.2.0 24901 32760 90492 146768 2 59 15434926 25165825 3526 130560 0 17200227 99.783 19640084 2143 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:12:11] CVMFS is ok
[2025-06-04 07:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:12:11] Checking for apptainer binary...
[2025-06-04 07:12:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:12:11] Running /usr/bin/apptainer --version
[2025-06-04 07:12:11] apptainer version 1.3.2-1.el7
[2025-06-04 07:12:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:12:25] cg-vwn281.simple-grid.lan
[2025-06-04 07:12:25] apptainer works
[2025-06-04 07:12:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:12:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:12:25] Starting ATLAS job with PandaID=6677920032
[2025-06-04 07:12:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:18:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:18:18] 2025-06-04 09:03:56,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:18:18] 2025-06-04 09:03:56,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:18:18] 2025-06-04 09:03:56,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:18:18] 2025-06-04 09:03:56,235 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:18:18] 2025-06-04 09:03:56,235 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,237 | INFO     | sum of deviations: 51703249951.499985
[2025-06-04 11:18:18] 2025-06-04 09:03:56,237 | INFO     | mean x: 1749021165.5
[2025-06-04 11:18:18] 2025-06-04 09:03:56,237 | INFO     | mean y: 2440330.939814815
[2025-06-04 11:18:18] 2025-06-04 09:03:56,238 | INFO     | -- intersect: -28936494307.4786
[2025-06-04 11:18:18] 2025-06-04 09:03:56,238 | INFO     | intersect: -28936494307.4786
[2025-06-04 11:18:18] 2025-06-04 09:03:56,245 | INFO     | chi2: 7.334552513925154
[2025-06-04 11:18:18] 2025-06-04 09:03:56,246 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,248 | INFO     | sum of deviations: 64432942139.99999
[2025-06-04 11:18:18] 2025-06-04 09:03:56,248 | INFO     | mean x: 1749021013.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,248 | INFO     | mean y: 2449296.213270142
[2025-06-04 11:18:18] 2025-06-04 09:03:56,248 | INFO     | -- intersect: -38686501727.937645
[2025-06-04 11:18:18] 2025-06-04 09:03:56,248 | INFO     | intersect: -38686501727.937645
[2025-06-04 11:18:18] 2025-06-04 09:03:56,249 | INFO     | chi2: 6.64390625952558
[2025-06-04 11:18:18] 2025-06-04 09:03:56,249 | INFO     | current chi2=6.64390625952558 (change=9.416337985014557 %)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,249 | INFO     | right removable region: 210
[2025-06-04 11:18:18] 2025-06-04 09:03:56,249 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,251 | INFO     | sum of deviations: -24776485472.999996
[2025-06-04 11:18:18] 2025-06-04 09:03:56,251 | INFO     | mean x: 1749021318.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,251 | INFO     | mean y: 2495305.886255924
[2025-06-04 11:18:18] 2025-06-04 09:03:56,252 | INFO     | -- intersect: 14879612015.726128
[2025-06-04 11:18:18] 2025-06-04 09:03:56,252 | INFO     | intersect: 14879612015.726128
[2025-06-04 11:18:18] 2025-06-04 09:03:56,252 | INFO     | chi2: 2.2069057678188746
[2025-06-04 11:18:18] 2025-06-04 09:03:56,252 | INFO     | current chi2=2.2069057678188746 (change=69.91083282001306 %)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,253 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 11:18:18] 2025-06-04 09:03:56,254 | INFO     | sum of deviations: -57212005163.999985
[2025-06-04 11:18:18] 2025-06-04 09:03:56,255 | INFO     | mean x: 1749021470.5
[2025-06-04 11:18:18] 2025-06-04 09:03:56,255 | INFO     | mean y: 2519576.1165048545
[2025-06-04 11:18:18] 2025-06-04 09:03:56,255 | INFO     | -- intersect: 36918334423.5551
[2025-06-04 11:18:18] 2025-06-04 09:03:56,255 | INFO     | intersect: 36918334423.5551
[2025-06-04 11:18:18] 2025-06-04 09:03:56,255 | INFO     | chi2: 0.9982506796161597
[2025-06-04 11:18:18] 2025-06-04 09:03:56,256 | INFO     | current chi2=0.9982506796161597 (change=54.766954975030536 %)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,256 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,258 | INFO     | sum of deviations: -55133922251.00002
[2025-06-04 11:18:18] 2025-06-04 09:03:56,258 | INFO     | mean x: 1749021623.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,258 | INFO     | mean y: 2517887.6666666665
[2025-06-04 11:18:18] 2025-06-04 09:03:56,258 | INFO     | -- intersect: 38298941783.73622
[2025-06-04 11:18:18] 2025-06-04 09:03:56,258 | INFO     | intersect: 38298941783.73622
[2025-06-04 11:18:18] 2025-06-04 09:03:56,258 | INFO     | chi2: 0.982738793291937
[2025-06-04 11:18:18] 2025-06-04 09:03:56,259 | INFO     | current chi2=0.982738793291937 (change=1.5539069134605694 %)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,259 | INFO     | left removable region: 30
[2025-06-04 11:18:18] 2025-06-04 09:03:56,259 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,260 | INFO     | sum of deviations: -21444190771.0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,261 | INFO     | mean x: 1749021897.5
[2025-06-04 11:18:18] 2025-06-04 09:03:56,261 | INFO     | mean y: 2511664.533333333
[2025-06-04 11:18:18] 2025-06-04 09:03:56,261 | INFO     | -- intersect: 20743162199.897648
[2025-06-04 11:18:18] 2025-06-04 09:03:56,261 | INFO     | intersect: 20743162199.897648
[2025-06-04 11:18:18] 2025-06-04 09:03:56,261 | INFO     | chi2: 0.15030859946243702
[2025-06-04 11:18:18] 2025-06-04 09:03:56,261 | INFO     | -- intersect: 20743162199.897648
[2025-06-04 11:18:18] 2025-06-04 09:03:56,262 | INFO     | current memory leak: -11.86 B/s (using 180 data points, chi2=0.15)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | ..............................
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . Timing measurements:
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . get job = 0 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . initial setup = 8 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . payload setup = 151 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . stage-in = 0 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . payload execution = 13289 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . stage-out = 3 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | . log creation = 1 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,263 | INFO     | ..............................
[2025-06-04 11:18:18] 2025-06-04 09:03:56,472 | INFO     | 
[2025-06-04 11:18:18] 2025-06-04 09:03:56,472 | INFO     | job summary report
[2025-06-04 11:18:18] 2025-06-04 09:03:56,472 | INFO     | --------------------------------------------------
[2025-06-04 11:18:18] 2025-06-04 09:03:56,472 | INFO     | PanDA job id: 6677920032
[2025-06-04 11:18:18] 2025-06-04 09:03:56,472 | INFO     | task id: 45006595
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | errors: (none)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | pilot state: finished 
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | transexitcode: 0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | exeerrorcode: 0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | exeerrordiag: 
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | exitcode: 0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | exitmsg: OK
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | cpuconsumptiontime: 49559 s
[2025-06-04 11:18:18] 2025-06-04 09:03:56,473 | INFO     | nevents: 400
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | neventsw: 0
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | pid: 15479
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | pgrp: 15479
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | corecount: 8
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | event service: False
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 24: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 67: 2405536, 78: 2405564, 84: 2405826, 88: 2406134, 13
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | --------------------------------------------------
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | 
[2025-06-04 11:18:18] 2025-06-04 09:03:56,474 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 11:18:18] 2025-06-04 09:03:56,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:18:18] 2025-06-04 09:03:56,923 | INFO     | job 6677920032 has completed (purged errors)
[2025-06-04 11:18:18] 2025-06-04 09:03:56,923 | INFO     | overall cleanup function is called
[2025-06-04 11:18:18] 2025-06-04 09:03:57,932 | INFO     | --- collectZombieJob: --- 10, [15479]
[2025-06-04 11:18:18] 2025-06-04 09:03:57,932 | INFO     | zombie collector waiting for pid 15479
[2025-06-04 11:18:18] 2025-06-04 09:03:57,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:18:18] 2025-06-04 09:03:57,932 | INFO     | collected zombie processes
[2025-06-04 11:18:18] 2025-06-04 09:03:57,933 | INFO     | will attempt to kill all subprocesses of pid=15479
[2025-06-04 11:18:18] 2025-06-04 09:03:58,064 | INFO     | process IDs to be killed: [15479] (in reverse order)
[2025-06-04 11:18:18] 2025-06-04 09:03:58,855 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:18:18] 2025-06-04 09:03:58,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:18:18] 2025-06-04 09:03:58,859 | INFO     | did not find any defunct processes belonging to 15479
[2025-06-04 11:18:18] 2025-06-04 09:03:58,865 | INFO     | did not find any defunct processes belonging to 15479
[2025-06-04 11:18:18] 2025-06-04 09:03:58,866 | INFO     | ready for new job
[2025-06-04 11:18:18] 2025-06-04 09:03:58,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:18:18] 2025-06-04 09:03:58,868 | INFO     | **************************************
[2025-06-04 11:18:18] 2025-06-04 09:03:58,868 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:18:18] 2025-06-04 09:03:58,868 | INFO     | **************************************
[2025-06-04 11:18:18] 2025-06-04 09:03:58,868 | INFO     | 
[2025-06-04 11:18:18] 2025-06-04 09:03:58,869 | INFO     | pilot is running in a VM
[2025-06-04 11:18:18] 2025-06-04 09:03:58,869 | INFO     | architecture information:
[2025-06-04 11:18:18] 2025-06-04 09:03:58,876 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:18:18] 2025-06-04 09:03:59,251 | INFO     | cat /etc/os-release:
[2025-06-04 11:18:18] NAME="CentOS Linux"
[2025-06-04 11:18:18] VERSION="7 (Core)"
[2025-06-04 11:18:18] ID="centos"
[2025-06-04 11:18:18] ID_LIKE="rhel fedora"
[2025-06-04 11:18:18] VERSION_ID="7"
[2025-06-04 11:18:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:18:18] ANSI_COLOR="0;31"
[2025-06-04 11:18:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:18:18] HOME_URL="https://www.centos.org/"
[2025-06-04 11:18:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:18:18] 
[2025-06-04 11:18:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:18:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:18:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:18:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:18:18] 
[2025-06-04 11:18:18] 2025-06-04 09:03:59,252 | INFO     | **************************************
[2025-06-04 11:18:18] 2025-06-04 09:03:59,755 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 11:18:18] 2025-06-04 09:04:00,255 | INFO     | sufficient remaining disk space (496871931904 B)
[2025-06-04 11:18:18] 2025-06-04 09:04:00,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:18:18] 2025-06-04 09:04:00,255 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:18:18] 2025-06-04 09:04:00,255 | INFO     | update_server=False
[2025-06-04 11:18:18] 2025-06-04 09:04:00,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:18:18] 2025-06-04 09:04:00,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:18:18] 2025-06-04 09:04:00,263 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:18:18] 2025-06-04 09:04:00,264 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:18:18] 2025-06-04 09:04:00,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:18:18] 2025-06-04 09:04:00,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:18:18] 2025-06-04 09:04:00,643 | INFO     | all data control threads have been joined
[2025-06-04 11:18:18] 2025-06-04 09:04:00,675 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:18:18] 2025-06-04 09:04:00,675 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:18:18] 2025-06-04 09:04:00,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:18:18] 2025-06-04 09:04:00,676 | INFO     | will abort loop
[2025-06-04 11:18:18] 2025-06-04 09:04:00,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:18:18] 2025-06-04 09:04:00,902 | INFO     | all job control threads have been joined
[2025-06-04 11:18:18] 2025-06-04 09:04:01,261 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:01,445 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:01,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:18:18] 2025-06-04 09:04:01,546 | INFO     | all payload control threads have been joined
[2025-06-04 11:18:18] 2025-06-04 09:04:01,649 | INFO     | [data] control thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:01,682 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:01,908 | INFO     | [job] control thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:01,923 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,389 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,392 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,463 | INFO     | [job] validate thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,493 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,509 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,552 | INFO     | [payload] control thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,728 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:02,786 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:04,265 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:18:18] 2025-06-04 09:04:05,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829828335424)>', '<ExcThread(monitor, started 139829085984512)>']
[2025-06-04 11:18:18] 2025-06-04 09:04:05,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:18:18] 2025-06-04 09:04:05,294 | INFO     | [monitor] control thread has ended
[2025-06-04 11:18:18] 2025-06-04 09:04:10,255 | INFO     | all workflow threads have been joined
[2025-06-04 11:18:18] 2025-06-04 09:04:10,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:18:18] 2025-06-04 09:04:10,256 | INFO     | traces error code: 0
[2025-06-04 11:18:18] 2025-06-04 09:04:10,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:18:18] 2025-06-04 09:04:10,547 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:18:18] 2025-06-04 09:04:10,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:18:18] 2025-06-04 09:04:10,759 [wrapper] pilotpid: 2908
[2025-06-04 11:18:18] 2025-06-04 09:04:10,877 [wrapper] Pilot exit status: 0
[2025-06-04 11:18:18] 2025-06-04 09:04:11,412 [wrapper] pandaids: 6677920032
[2025-06-04 11:18:18] 2025-06-04 09:04:12,562 [wrapper] cleanup supervisor_pilot 24172 2909
[2025-06-04 11:18:18] 2025-06-04 09:04:12,628 [wrapper] Test setup, not cleaning
[2025-06-04 11:18:18] 2025-06-04 09:04:12,726 [wrapper] apfmon messages muted
[2025-06-04 11:18:18] 2025-06-04 09:04:12,840 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:18:18] 2025-06-04 09:04:12,952 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:18:18]  *** Error codes and diagnostics ***
[2025-06-04 11:18:18]     "exeErrorCode": 0,
[2025-06-04 11:18:18]     "exeErrorDiag": "",
[2025-06-04 11:18:18]     "pilotErrorCode": 0,
[2025-06-04 11:18:18]     "pilotErrorDiag": "",
[2025-06-04 11:18:18]  *** Listing of results directory ***
[2025-06-04 11:18:18] total 387848
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 11:18:18] -rwx------. 1 boinc boinc     37140 Jun  3 20:17 runpilot2-wrapper.sh
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:17 queuedata.json
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:18:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:12 run_atlas
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:12 job.xml
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc      6390 Jun  4 07:12 init_data.xml
[2025-06-04 11:18:18] -rw-r--r--. 2 boinc boinc 214961505 Jun  4 07:12 EVNT.45006593._001683.pool.root.1
[2025-06-04 11:18:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:12 start_atlas.sh
[2025-06-04 11:18:18] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:12 shared
[2025-06-04 11:18:18] -rw-r--r--. 2 boinc boinc    508878 Jun  4 07:12 input.tar.gz
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:12 boinc_lockfile
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:12 pandaJob.out
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc    986745 Jun  4 07:15 agis_schedconf.cvmfs.json
[2025-06-04 11:18:18] drwx------. 4 boinc boinc      4096 Jun  4 07:15 pilot3
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc 175278070 Jun  4 11:00 HITS.45006595._041958.pool.root.1
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:01 boinc_task_state.xml
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc      1014 Jun  4 11:02 memory_monitor_summary.json
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc   1603667 Jun  4 11:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc    380281 Jun  4 11:02 log.45006595._041958.job.log.tgz.1
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc        95 Jun  4 11:03 pilot_heartbeat.json
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc      7686 Jun  4 11:03 heartbeat.json
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc      4725 Jun  4 11:04 pilotlog.txt
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc   1169205 Jun  4 11:04 log.45006595._041958.job.log.1
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc       357 Jun  4 11:04 output.list
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:04 runtime_log
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc   1566720 Jun  4 11:04 result.tar.gz
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc       657 Jun  4 11:04 YlINDmHNlg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIYZKDmpbAROo.diag
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:04 runtime_log.err
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:18 boinc_mmap_file
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:18 wrapper_checkpoint.txt
[2025-06-04 11:18:18] -rw-r--r--. 1 boinc boinc     20533 Jun  4 11:18 stderr.txt
[2025-06-04 11:18:18] HITS file was successfully produced:
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc 175278070 Jun  4 11:00 shared/HITS.pool.root.1
[2025-06-04 11:18:18]  *** Contents of shared directory: ***
[2025-06-04 11:18:18] total 383144
[2025-06-04 11:18:18] -rw-r--r--. 2 boinc boinc 214961505 Jun  4 07:12 ATLAS.root_0
[2025-06-04 11:18:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:12 start_atlas.sh
[2025-06-04 11:18:18] -rw-r--r--. 2 boinc boinc    508878 Jun  4 07:12 input.tar.gz
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc 175278070 Jun  4 11:00 HITS.pool.root.1
[2025-06-04 11:18:18] -rw-------. 1 boinc boinc   1566720 Jun  4 11:04 result.tar.gz
11:18:20 (31541): run_atlas exited; CPU time 49756.646609
11:18:20 (31541): called boinc_finish(0)

</stderr_txt>
]]>

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