Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:42:09 (2021): wrapper (7.7.26015): starting
17:42:09 (2021): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 17:42:09] Arguments: --nthreads 12
[2025-06-03 17:42:09] Threads: 12
[2025-06-03 17:42:09] Checking for CVMFS
[2025-06-03 17:42:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:42:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:42:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:42:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:42:09] 2.11.2.0 2984 34749 82732 146757 0 55 16533559 20275200 1 130560 0 15127325 99.982 6288347 7677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 17:42:09] CVMFS is ok
[2025-06-03 17:42:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:42:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:42:09] Further information can be found at the LHC@home message board.
[2025-06-03 17:42:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:42:09] Checking for apptainer binary...
[2025-06-03 17:42:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:42:09] Running /usr/bin/apptainer --version
[2025-06-03 17:42:09] apptainer version 1.3.2-1.el7
[2025-06-03 17:42:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:42:11] c-205-26.aglt2.org
[2025-06-03 17:42:11] apptainer works
[2025-06-03 17:42:11] Set ATHENA_PROC_NUMBER=12
[2025-06-03 17:42:11] Set ATHENA_CORE_NUMBER=12
[2025-06-03 17:42:11] Starting ATLAS job with PandaID=6677919981
[2025-06-03 17:42:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:47:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:47:26]  guid=fe6f5af7-585b-453c-b4ad-2e18cac0bdb7
[2025-06-03 18:47:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 18:47:26]  is_altstaged=None
[2025-06-03 18:47:26]  is_tar=False
[2025-06-03 18:47:26]  lfn=log.45006595._041907.job.log.tgz.1
[2025-06-03 18:47:26]  mtime=0
[2025-06-03 18:47:26]  protocol_id=None
[2025-06-03 18:47:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:47:26]  replicas=None
[2025-06-03 18:47:26]  scope=mc23_13p6TeV
[2025-06-03 18:47:26]  status=None
[2025-06-03 18:47:26]  status_code=0
[2025-06-03 18:47:26]  storage_token=
[2025-06-03 18:47:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677919981/log.45006595._041907.job.log.tgz.1
[2025-06-03 18:47:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/5b/log.45006595._041907.job.log.tgz.1
[2025-06-03 18:47:26]  workdir=None
[2025-06-03 18:47:26] ]
[2025-06-03 18:47:26] 2025-06-03 22:47:03,632 | INFO     | transferring file log.45006595._041907.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677919981/log.45006595._041907.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:47:26] 2025-06-03 22:47:03,632 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677919981/log.45006595._041907.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._041907.job
[2025-06-03 18:47:26] 2025-06-03 22:47:03,654 | INFO     | adding to output.list: log.45006595._041907.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/5b/log.45006595._041907.job.log.tg
[2025-06-03 18:47:26] 2025-06-03 22:47:03,655 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:47:26] 2025-06-03 22:47:03,655 | INFO     | summary of transferred files:
[2025-06-03 18:47:26] 2025-06-03 22:47:03,655 | INFO     |  -- lfn=log.45006595._041907.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:47:26] 2025-06-03 22:47:03,656 | INFO     | stage-out finished correctly
[2025-06-03 18:47:26] 2025-06-03 22:47:04,595 | INFO     | monitor loop #292: job 0:6677919981 is in state 'finished'
[2025-06-03 18:47:26] 2025-06-03 22:47:04,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:47:26] 2025-06-03 22:47:04,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:47:26] 2025-06-03 22:47:05,280 | INFO     | job 6677919981 has state=finished
[2025-06-03 18:47:26] 2025-06-03 22:47:05,280 | INFO     | preparing for final server update for job 6677919981 in state='finished'
[2025-06-03 18:47:26] 2025-06-03 22:47:05,281 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:47:26] 2025-06-03 22:47:05,281 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:47:26] 2025-06-03 22:47:05,281 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:47:26] 2025-06-03 22:47:05,281 | INFO     | job 6677919981 has finished - writing final server update
[2025-06-03 18:47:26] 2025-06-03 22:47:05,282 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:47:26] 2025-06-03 22:47:05,283 | INFO     | executing command: lscpu
[2025-06-03 18:47:26] 2025-06-03 22:47:05,311 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:47:26] 2025-06-03 22:47:07,098 | INFO     | monitor loop #293: job 0:6677919981 is in state 'finished'
[2025-06-03 18:47:26] 2025-06-03 22:47:07,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:47:26] 2025-06-03 22:47:09,601 | INFO     | monitor loop #294: job 0:6677919981 is in state 'finished'
[2025-06-03 18:47:26] 2025-06-03 22:47:09,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:47:26] 2025-06-03 22:47:10,064 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 18:47:26] 2025-06-03 22:47:10,065 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677919981/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:47:26] 2025-06-03 22:47:10,066 | INFO     | extracted standard info from prmon json
[2025-06-03 18:47:26] 2025-06-03 22:47:10,066 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:47:26] 2025-06-03 22:47:10,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:47:26] 2025-06-03 22:47:10,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:47:26] 2025-06-03 22:47:10,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:47:26] 2025-06-03 22:47:10,068 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:47:26] 2025-06-03 22:47:10,068 | INFO     | sum of square deviations: 57407588.0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,068 | INFO     | sum of deviations: -4576427156.0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,068 | INFO     | mean x: 1748988988.0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,068 | INFO     | mean y: 2742934.8947368423
[2025-06-03 18:47:26] 2025-06-03 22:47:10,068 | INFO     | -- intersect: 139428922976.2537
[2025-06-03 18:47:26] 2025-06-03 22:47:10,069 | INFO     | intersect: 139428922976.2537
[2025-06-03 18:47:26] 2025-06-03 22:47:10,069 | INFO     | chi2: 0.07508293359342465
[2025-06-03 18:47:26] 2025-06-03 22:47:10,069 | INFO     | -- intersect: 139428922976.2537
[2025-06-03 18:47:26] 2025-06-03 22:47:10,069 | INFO     | current memory leak: -79.72 B/s (using 57 data points, chi2=0.08)
[2025-06-03 18:47:26] 2025-06-03 22:47:10,069 | INFO     | ..............................
[2025-06-03 18:47:26] 2025-06-03 22:47:10,069 | INFO     | . Timing measurements:
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . get job = 0 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . initial setup = 2 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . payload setup = 9 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . stage-in = 0 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . payload execution = 3848 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . stage-out = 0 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | . log creation = 0 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,070 | INFO     | ..............................
[2025-06-03 18:47:26] 2025-06-03 22:47:10,524 | INFO     | 
[2025-06-03 18:47:26] 2025-06-03 22:47:10,524 | INFO     | job summary report
[2025-06-03 18:47:26] 2025-06-03 22:47:10,525 | INFO     | --------------------------------------------------
[2025-06-03 18:47:26] 2025-06-03 22:47:10,525 | INFO     | PanDA job id: 6677919981
[2025-06-03 18:47:26] 2025-06-03 22:47:10,525 | INFO     | task id: 45006595
[2025-06-03 18:47:26] 2025-06-03 22:47:10,525 | INFO     | errors: (none)
[2025-06-03 18:47:26] 2025-06-03 22:47:10,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:47:26] 2025-06-03 22:47:10,525 | INFO     | pilot state: finished 
[2025-06-03 18:47:26] 2025-06-03 22:47:10,526 | INFO     | transexitcode: 0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,526 | INFO     | exeerrorcode: 0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,526 | INFO     | exeerrordiag: 
[2025-06-03 18:47:26] 2025-06-03 22:47:10,526 | INFO     | exitcode: 0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,526 | INFO     | exitmsg: OK
[2025-06-03 18:47:26] 2025-06-03 22:47:10,526 | INFO     | cpuconsumptiontime: 40095 s
[2025-06-03 18:47:26] 2025-06-03 22:47:10,527 | INFO     | nevents: 400
[2025-06-03 18:47:26] 2025-06-03 22:47:10,527 | INFO     | neventsw: 0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,527 | INFO     | pid: 12124
[2025-06-03 18:47:26] 2025-06-03 22:47:10,527 | INFO     | pgrp: 12124
[2025-06-03 18:47:26] 2025-06-03 22:47:10,527 | INFO     | corecount: 12
[2025-06-03 18:47:26] 2025-06-03 22:47:10,527 | INFO     | event service: False
[2025-06-03 18:47:26] 2025-06-03 22:47:10,528 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3861: 2431142, 3863: 2440111, 3864: 2440167, 3869: 2440465}
[2025-06-03 18:47:26] 2025-06-03 22:47:10,528 | INFO     | --------------------------------------------------
[2025-06-03 18:47:26] 2025-06-03 22:47:10,528 | INFO     | 
[2025-06-03 18:47:26] 2025-06-03 22:47:10,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 18:47:26] 2025-06-03 22:47:10,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:47:26] 2025-06-03 22:47:10,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:47:26] 2025-06-03 22:47:10,556 | INFO     | job 6677919981 has completed (purged errors)
[2025-06-03 18:47:26] 2025-06-03 22:47:10,557 | INFO     | overall cleanup function is called
[2025-06-03 18:47:26] 2025-06-03 22:47:11,564 | INFO     | --- collectZombieJob: --- 10, [12124]
[2025-06-03 18:47:26] 2025-06-03 22:47:11,565 | INFO     | zombie collector waiting for pid 12124
[2025-06-03 18:47:26] 2025-06-03 22:47:11,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:47:26] 2025-06-03 22:47:11,575 | INFO     | collected zombie processes
[2025-06-03 18:47:26] 2025-06-03 22:47:11,576 | INFO     | will attempt to kill all subprocesses of pid=12124
[2025-06-03 18:47:26] 2025-06-03 22:47:11,666 | INFO     | process IDs to be killed: [12124] (in reverse order)
[2025-06-03 18:47:26] 2025-06-03 22:47:11,715 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:47:26] 2025-06-03 22:47:11,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:47:26] 2025-06-03 22:47:11,719 | INFO     | did not find any defunct processes belonging to 12124
[2025-06-03 18:47:26] 2025-06-03 22:47:11,723 | INFO     | did not find any defunct processes belonging to 12124
[2025-06-03 18:47:26] 2025-06-03 22:47:11,723 | INFO     | ready for new job
[2025-06-03 18:47:26] 2025-06-03 22:47:11,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:47:26] 2025-06-03 22:47:11,725 | INFO     | **************************************
[2025-06-03 18:47:26] 2025-06-03 22:47:11,725 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:47:26] 2025-06-03 22:47:11,725 | INFO     | **************************************
[2025-06-03 18:47:26] 2025-06-03 22:47:11,725 | INFO     | 
[2025-06-03 18:47:26] 2025-06-03 22:47:11,726 | INFO     | architecture information:
[2025-06-03 18:47:26] 2025-06-03 22:47:11,726 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:47:26] 2025-06-03 22:47:11,743 | INFO     | cat /etc/os-release:
[2025-06-03 18:47:26] NAME="CentOS Linux"
[2025-06-03 18:47:26] VERSION="7 (Core)"
[2025-06-03 18:47:26] ID="centos"
[2025-06-03 18:47:26] ID_LIKE="rhel fedora"
[2025-06-03 18:47:26] VERSION_ID="7"
[2025-06-03 18:47:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:47:26] ANSI_COLOR="0;31"
[2025-06-03 18:47:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:47:26] HOME_URL="https://www.centos.org/"
[2025-06-03 18:47:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:47:26] 
[2025-06-03 18:47:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:47:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:47:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:47:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:47:26] 
[2025-06-03 18:47:26] 2025-06-03 22:47:11,743 | INFO     | **************************************
[2025-06-03 18:47:26] 2025-06-03 22:47:12,246 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 18:47:26] 2025-06-03 22:47:12,264 | INFO     | sufficient remaining disk space (29426188288 B)
[2025-06-03 18:47:26] 2025-06-03 22:47:12,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:47:26] 2025-06-03 22:47:12,264 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:47:26] 2025-06-03 22:47:12,265 | INFO     | update_server=False
[2025-06-03 18:47:26] 2025-06-03 22:47:12,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:47:26] 2025-06-03 22:47:12,265 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:47:26] 2025-06-03 22:47:12,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:47:26] 2025-06-03 22:47:12,266 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:47:26] 2025-06-03 22:47:12,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:47:26] 2025-06-03 22:47:12,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:47:26] 2025-06-03 22:47:12,622 | INFO     | all data control threads have been joined
[2025-06-03 18:47:26] 2025-06-03 22:47:13,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:47:26] 2025-06-03 22:47:13,110 | INFO     | aborting loop
[2025-06-03 18:47:26] 2025-06-03 22:47:13,165 | INFO     | all job control threads have been joined
[2025-06-03 18:47:26] 2025-06-03 22:47:13,270 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:13,289 | INFO     | [job] validate thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:13,403 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:13,452 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:13,473 | INFO     | all payload control threads have been joined
[2025-06-03 18:47:26] 2025-06-03 22:47:13,627 | INFO     | [data] control thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:13,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:13,883 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,001 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,115 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,171 | INFO     | [job] control thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,271 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,436 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,479 | INFO     | [payload] control thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:14,723 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:15,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:47:26] 2025-06-03 22:47:15,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:47:26] 2025-06-03 22:47:16,165 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:19,492 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:47:26] 2025-06-03 22:47:20,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201136371520)>', '<ExcThread(monitor, started 140200449652480)>']
[2025-06-03 18:47:26] 2025-06-03 22:47:21,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:47:26] 2025-06-03 22:47:21,309 | INFO     | [monitor] control thread has ended
[2025-06-03 18:47:26] 2025-06-03 22:47:25,948 | INFO     | all workflow threads have been joined
[2025-06-03 18:47:26] 2025-06-03 22:47:25,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:47:26] 2025-06-03 22:47:25,949 | INFO     | traces error code: 0
[2025-06-03 18:47:26] 2025-06-03 22:47:25,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:47:26] 2025-06-03 22:47:26,033 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:47:26] 2025-06-03 22:47:26,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:47:26] 2025-06-03 22:47:26,040 [wrapper] pilotpid: 5698
[2025-06-03 18:47:26] 2025-06-03 22:47:26,044 [wrapper] Pilot exit status: 0
[2025-06-03 18:47:26] 2025-06-03 22:47:26,059 [wrapper] pandaids: 6677919981
[2025-06-03 18:47:26] 2025-06-03 22:47:26,096 [wrapper] cleanup supervisor_pilot 10891 5699
[2025-06-03 18:47:26] 2025-06-03 22:47:26,099 [wrapper] Test setup, not cleaning
[2025-06-03 18:47:26] 2025-06-03 22:47:26,103 [wrapper] apfmon messages muted
[2025-06-03 18:47:26] 2025-06-03 22:47:26,107 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:47:26] 2025-06-03 22:47:26,111 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:47:26]  *** Error codes and diagnostics ***
[2025-06-03 18:47:26]     "exeErrorCode": 0,
[2025-06-03 18:47:26]     "exeErrorDiag": "",
[2025-06-03 18:47:26]     "pilotErrorCode": 0,
[2025-06-03 18:47:26]     "pilotErrorDiag": "",
[2025-06-03 18:47:26]  *** Listing of results directory ***
[2025-06-03 18:47:26] total 385312
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 18:47:26] -rwx------ 1 boincer umatlas     37140 Jun  3 14:17 runpilot2-wrapper.sh
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 14:17 queuedata.json
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas       100 Jun  3 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:47:26] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 17:42 run_atlas
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas       105 Jun  3 17:42 job.xml
[2025-06-03 18:47:26] -rw-r--r-- 2 boincer umatlas 215344789 Jun  3 17:42 EVNT.45006593._001681.pool.root.1
[2025-06-03 18:47:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 17:42 start_atlas.sh
[2025-06-03 18:47:26] drwxrwx--x 2 boincer umatlas      4096 Jun  3 17:42 shared
[2025-06-03 18:47:26] -rw-r--r-- 2 boincer umatlas    508873 Jun  3 17:42 input.tar.gz
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas         0 Jun  3 17:42 boinc_lockfile
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 17:42 pandaJob.out
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas    986869 Jun  3 17:42 agis_schedconf.cvmfs.json
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas   1603667 Jun  3 17:42 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:47:26] drwx------ 4 boincer umatlas      4096 Jun  3 17:42 pilot3
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas      5867 Jun  3 18:39 init_data.xml
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas        95 Jun  3 18:46 pilot_heartbeat.json
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas 173906441 Jun  3 18:46 HITS.45006595._041907.pool.root.1
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas       530 Jun  3 18:46 boinc_task_state.xml
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas      1049 Jun  3 18:46 memory_monitor_summary.json
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas    352615 Jun  3 18:47 log.45006595._041907.job.log.tgz.1
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas      7753 Jun  3 18:47 heartbeat.json
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas        27 Jun  3 18:47 wrapper_checkpoint.txt
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 18:47 boinc_mmap_file
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas      4476 Jun  3 18:47 pilotlog.txt
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas    381575 Jun  3 18:47 log.45006595._041907.job.log.1
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas       357 Jun  3 18:47 output.list
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas       620 Jun  3 18:47 runtime_log
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas    757760 Jun  3 18:47 result.tar.gz
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 18:47 runtime_log.err
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas       659 Jun  3 18:47 dtrMDmHNlg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1XZKDmGXinXm.diag
[2025-06-03 18:47:26] -rw-r--r-- 1 boincer umatlas     21294 Jun  3 18:47 stderr.txt
[2025-06-03 18:47:26] HITS file was successfully produced:
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas 173906441 Jun  3 18:46 shared/HITS.pool.root.1
[2025-06-03 18:47:26]  *** Contents of shared directory: ***
[2025-06-03 18:47:26] total 381392
[2025-06-03 18:47:26] -rw-r--r-- 2 boincer umatlas 215344789 Jun  3 17:42 ATLAS.root_0
[2025-06-03 18:47:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 17:42 start_atlas.sh
[2025-06-03 18:47:26] -rw-r--r-- 2 boincer umatlas    508873 Jun  3 17:42 input.tar.gz
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas 173906441 Jun  3 18:46 HITS.pool.root.1
[2025-06-03 18:47:26] -rw------- 1 boincer umatlas    757760 Jun  3 18:47 result.tar.gz
18:47:28 (2021): run_atlas exited; CPU time 40059.914665
18:47:28 (2021): called boinc_finish(0)

</stderr_txt>
]]>

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