Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:47:27 (15121): wrapper (7.7.26015): starting
17:47:27 (15121): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:47:27] Arguments: --nthreads 8
[2025-06-03 17:47:27] Threads: 8
[2025-06-03 17:47:27] Checking for CVMFS
[2025-06-03 17:47:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:47:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:47:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:47:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:47:27] 2.11.2.0 2871 7652 74952 146757 3 56 16725466 20275200 1 130560 0 2212711 99.984 1123008 44632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 17:47:27] CVMFS is ok
[2025-06-03 17:47:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:47:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:47:27] Further information can be found at the LHC@home message board.
[2025-06-03 17:47:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:47:27] Checking for apptainer binary...
[2025-06-03 17:47:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:47:27] Running /usr/bin/apptainer --version
[2025-06-03 17:47:27] apptainer version 1.3.2-1.el7
[2025-06-03 17:47:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:47:29] c-115-7.aglt2.org
[2025-06-03 17:47:29] apptainer works
[2025-06-03 17:47:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:47:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:47:29] Starting ATLAS job with PandaID=6677675989
[2025-06-03 17:47:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:26:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:26:27]  guid=f29c84d6-9e20-4dea-8e98-0431a0fa96c1
[2025-06-03 19:26:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 19:26:27]  is_altstaged=None
[2025-06-03 19:26:27]  is_tar=False
[2025-06-03 19:26:27]  lfn=log.45006595._036256.job.log.tgz.1
[2025-06-03 19:26:27]  mtime=0
[2025-06-03 19:26:27]  protocol_id=None
[2025-06-03 19:26:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 19:26:27]  replicas=None
[2025-06-03 19:26:27]  scope=mc23_13p6TeV
[2025-06-03 19:26:27]  status=None
[2025-06-03 19:26:27]  status_code=0
[2025-06-03 19:26:27]  storage_token=
[2025-06-03 19:26:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677675989/log.45006595._036256.job.log.tgz.1
[2025-06-03 19:26:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/67/log.45006595._036256.job.log.tgz.1
[2025-06-03 19:26:27]  workdir=None
[2025-06-03 19:26:27] ]
[2025-06-03 19:26:27] 2025-06-03 23:26:04,587 | INFO     | transferring file log.45006595._036256.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677675989/log.45006595._036256.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 19:26:27] 2025-06-03 23:26:04,587 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677675989/log.45006595._036256.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._036256.job
[2025-06-03 19:26:27] 2025-06-03 23:26:04,613 | INFO     | adding to output.list: log.45006595._036256.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/67/log.45006595._036256.job.log.tg
[2025-06-03 19:26:27] 2025-06-03 23:26:04,614 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 19:26:27] 2025-06-03 23:26:04,615 | INFO     | summary of transferred files:
[2025-06-03 19:26:27] 2025-06-03 23:26:04,615 | INFO     |  -- lfn=log.45006595._036256.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 19:26:27] 2025-06-03 23:26:04,615 | INFO     | stage-out finished correctly
[2025-06-03 19:26:27] 2025-06-03 23:26:05,142 | INFO     | monitor loop #436: job 0:6677675989 is in state 'finished'
[2025-06-03 19:26:27] 2025-06-03 23:26:05,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:26:27] 2025-06-03 23:26:05,608 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 19:26:27] 2025-06-03 23:26:06,743 | INFO     | job 6677675989 has state=finished
[2025-06-03 19:26:27] 2025-06-03 23:26:06,743 | INFO     | preparing for final server update for job 6677675989 in state='finished'
[2025-06-03 19:26:27] 2025-06-03 23:26:06,744 | INFO     | this job has now completed (state=finished)
[2025-06-03 19:26:27] 2025-06-03 23:26:06,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 19:26:27] 2025-06-03 23:26:06,745 | INFO     | log transfer has been attempted: DONE
[2025-06-03 19:26:27] 2025-06-03 23:26:06,745 | INFO     | job 6677675989 has finished - writing final server update
[2025-06-03 19:26:27] 2025-06-03 23:26:06,745 | INFO     | total number of processed events: 400 (read)
[2025-06-03 19:26:27] 2025-06-03 23:26:06,747 | INFO     | executing command: lscpu
[2025-06-03 19:26:27] 2025-06-03 23:26:06,776 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 19:26:27] 2025-06-03 23:26:07,646 | INFO     | monitor loop #437: job 0:6677675989 is in state 'finished'
[2025-06-03 19:26:27] 2025-06-03 23:26:07,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:26:27] 2025-06-03 23:26:10,149 | INFO     | monitor loop #438: job 0:6677675989 is in state 'finished'
[2025-06-03 19:26:27] 2025-06-03 23:26:10,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:26:27] 2025-06-03 23:26:12,222 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 19:26:27] 2025-06-03 23:26:12,223 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677675989/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:26:27] 2025-06-03 23:26:12,224 | INFO     | extracted standard info from prmon json
[2025-06-03 19:26:27] 2025-06-03 23:26:12,224 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:26:27] 2025-06-03 23:26:12,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:26:27] 2025-06-03 23:26:12,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:26:27] 2025-06-03 23:26:12,225 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:26:27] 2025-06-03 23:26:12,228 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:26:27] 2025-06-03 23:26:12,228 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 19:26:27] 2025-06-03 23:26:12,229 | INFO     | sum of deviations: -6251299093.0
[2025-06-03 19:26:27] 2025-06-03 23:26:12,229 | INFO     | mean x: 1748990316.5
[2025-06-03 19:26:27] 2025-06-03 23:26:12,229 | INFO     | mean y: 2558098.644444444
[2025-06-03 19:26:27] 2025-06-03 23:26:12,229 | INFO     | -- intersect: 48375817448.31497
[2025-06-03 19:26:27] 2025-06-03 23:26:12,229 | INFO     | intersect: 48375817448.31497
[2025-06-03 19:26:27] 2025-06-03 23:26:12,230 | INFO     | chi2: 0.08193822592824683
[2025-06-03 19:26:27] 2025-06-03 23:26:12,230 | INFO     | -- intersect: 48375817448.31497
[2025-06-03 19:26:27] 2025-06-03 23:26:12,230 | INFO     | current memory leak: -27.66 B/s (using 90 data points, chi2=0.08)
[2025-06-03 19:26:27] 2025-06-03 23:26:12,230 | INFO     | ..............................
[2025-06-03 19:26:27] 2025-06-03 23:26:12,231 | INFO     | . Timing measurements:
[2025-06-03 19:26:27] 2025-06-03 23:26:12,231 | INFO     | . get job = 0 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,231 | INFO     | . initial setup = 2 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,231 | INFO     | . payload setup = 11 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,231 | INFO     | . stage-in = 0 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,231 | INFO     | . payload execution = 5868 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,232 | INFO     | . stage-out = 0 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,232 | INFO     | . log creation = 0 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,232 | INFO     | ..............................
[2025-06-03 19:26:27] 2025-06-03 23:26:12,319 | INFO     | 
[2025-06-03 19:26:27] 2025-06-03 23:26:12,319 | INFO     | job summary report
[2025-06-03 19:26:27] 2025-06-03 23:26:12,319 | INFO     | --------------------------------------------------
[2025-06-03 19:26:27] 2025-06-03 23:26:12,320 | INFO     | PanDA job id: 6677675989
[2025-06-03 19:26:27] 2025-06-03 23:26:12,320 | INFO     | task id: 45006595
[2025-06-03 19:26:27] 2025-06-03 23:26:12,320 | INFO     | errors: (none)
[2025-06-03 19:26:27] 2025-06-03 23:26:12,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:26:27] 2025-06-03 23:26:12,321 | INFO     | pilot state: finished 
[2025-06-03 19:26:27] 2025-06-03 23:26:12,321 | INFO     | transexitcode: 0
[2025-06-03 19:26:27] 2025-06-03 23:26:12,322 | INFO     | exeerrorcode: 0
[2025-06-03 19:26:27] 2025-06-03 23:26:12,322 | INFO     | exeerrordiag: 
[2025-06-03 19:26:27] 2025-06-03 23:26:12,322 | INFO     | exitcode: 0
[2025-06-03 19:26:27] 2025-06-03 23:26:12,323 | INFO     | exitmsg: OK
[2025-06-03 19:26:27] 2025-06-03 23:26:12,323 | INFO     | cpuconsumptiontime: 43646 s
[2025-06-03 19:26:27] 2025-06-03 23:26:12,323 | INFO     | nevents: 400
[2025-06-03 19:26:27] 2025-06-03 23:26:12,323 | INFO     | neventsw: 0
[2025-06-03 19:26:27] 2025-06-03 23:26:12,324 | INFO     | pid: 25259
[2025-06-03 19:26:27] 2025-06-03 23:26:12,324 | INFO     | pgrp: 25259
[2025-06-03 19:26:27] 2025-06-03 23:26:12,324 | INFO     | corecount: 8
[2025-06-03 19:26:27] 2025-06-03 23:26:12,324 | INFO     | event service: False
[2025-06-03 19:26:27] 2025-06-03 23:26:12,325 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 5882: 2432019, 5883: 2432018, 5884: 2441143, 5885: 2441199, 5891: 2441369}
[2025-06-03 19:26:27] 2025-06-03 23:26:12,325 | INFO     | --------------------------------------------------
[2025-06-03 19:26:27] 2025-06-03 23:26:12,325 | INFO     | 
[2025-06-03 19:26:27] 2025-06-03 23:26:12,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 19:26:27] 2025-06-03 23:26:12,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,358 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:26:27] 2025-06-03 23:26:12,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,358 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:26:27] 2025-06-03 23:26:12,359 | INFO     | job 6677675989 has completed (purged errors)
[2025-06-03 19:26:27] 2025-06-03 23:26:12,359 | INFO     | overall cleanup function is called
[2025-06-03 19:26:27] 2025-06-03 23:26:12,391 | INFO     | PID=18778 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 19:26:27] 2025-06-03 23:26:13,368 | INFO     | --- collectZombieJob: --- 10, [25259]
[2025-06-03 19:26:27] 2025-06-03 23:26:13,368 | INFO     | zombie collector waiting for pid 25259
[2025-06-03 19:26:27] 2025-06-03 23:26:13,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:26:27] 2025-06-03 23:26:13,368 | INFO     | collected zombie processes
[2025-06-03 19:26:27] 2025-06-03 23:26:13,368 | INFO     | will attempt to kill all subprocesses of pid=25259
[2025-06-03 19:26:27] 2025-06-03 23:26:13,451 | INFO     | process IDs to be killed: [25259] (in reverse order)
[2025-06-03 19:26:27] 2025-06-03 23:26:13,507 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:26:27] 2025-06-03 23:26:13,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:26:27] 2025-06-03 23:26:13,511 | INFO     | did not find any defunct processes belonging to 25259
[2025-06-03 19:26:27] 2025-06-03 23:26:13,513 | INFO     | did not find any defunct processes belonging to 25259
[2025-06-03 19:26:27] 2025-06-03 23:26:13,514 | INFO     | ready for new job
[2025-06-03 19:26:27] 2025-06-03 23:26:13,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:26:27] 2025-06-03 23:26:13,515 | INFO     | **************************************
[2025-06-03 19:26:27] 2025-06-03 23:26:13,515 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:26:27] 2025-06-03 23:26:13,515 | INFO     | **************************************
[2025-06-03 19:26:27] 2025-06-03 23:26:13,515 | INFO     | 
[2025-06-03 19:26:27] 2025-06-03 23:26:13,516 | INFO     | architecture information:
[2025-06-03 19:26:27] 2025-06-03 23:26:13,516 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:26:27] 2025-06-03 23:26:13,536 | INFO     | cat /etc/os-release:
[2025-06-03 19:26:27] NAME="CentOS Linux"
[2025-06-03 19:26:27] VERSION="7 (Core)"
[2025-06-03 19:26:27] ID="centos"
[2025-06-03 19:26:27] ID_LIKE="rhel fedora"
[2025-06-03 19:26:27] VERSION_ID="7"
[2025-06-03 19:26:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:26:27] ANSI_COLOR="0;31"
[2025-06-03 19:26:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:26:27] HOME_URL="https://www.centos.org/"
[2025-06-03 19:26:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:26:27] 
[2025-06-03 19:26:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:26:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:26:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:26:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:26:27] 
[2025-06-03 19:26:27] 2025-06-03 23:26:13,536 | INFO     | **************************************
[2025-06-03 19:26:27] 2025-06-03 23:26:14,040 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 19:26:27] 2025-06-03 23:26:14,061 | INFO     | sufficient remaining disk space (18646827008 B)
[2025-06-03 19:26:27] 2025-06-03 23:26:14,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:26:27] 2025-06-03 23:26:14,062 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:26:27] 2025-06-03 23:26:14,062 | INFO     | update_server=False
[2025-06-03 19:26:27] 2025-06-03 23:26:14,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:26:27] 2025-06-03 23:26:14,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:26:27] 2025-06-03 23:26:14,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:26:27] 2025-06-03 23:26:14,064 | INFO     | aborting loop
[2025-06-03 19:26:27] 2025-06-03 23:26:14,397 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:26:27] 2025-06-03 23:26:14,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:26:27] 2025-06-03 23:26:14,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:26:27] 2025-06-03 23:26:14,423 | INFO     | all payload control threads have been joined
[2025-06-03 19:26:27] 2025-06-03 23:26:14,874 | INFO     | all data control threads have been joined
[2025-06-03 19:26:27] 2025-06-03 23:26:14,916 | INFO     | all job control threads have been joined
[2025-06-03 19:26:27] 2025-06-03 23:26:15,065 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,068 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,069 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:26:27] 2025-06-03 23:26:15,281 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,426 | INFO     | [payload] control thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,656 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,880 | INFO     | [data] control thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:15,919 | INFO     | [job] control thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:16,155 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:16,160 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:16,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:26:27] 2025-06-03 23:26:16,361 | INFO     | [job] validate thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:16,373 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:16,484 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:17,220 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:20,203 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:26:27] 2025-06-03 23:26:22,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766411642688)>', '<ExcThread(monitor, started 139765642929920)>']
[2025-06-03 19:26:27] 2025-06-03 23:26:22,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:26:27] 2025-06-03 23:26:22,439 | INFO     | [monitor] control thread has ended
[2025-06-03 19:26:27] 2025-06-03 23:26:27,144 | INFO     | all workflow threads have been joined
[2025-06-03 19:26:27] 2025-06-03 23:26:27,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:26:27] 2025-06-03 23:26:27,145 | INFO     | traces error code: 0
[2025-06-03 19:26:27] 2025-06-03 23:26:27,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:26:27] 2025-06-03 23:26:27,251 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:26:27] 2025-06-03 23:26:27,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:26:27] 2025-06-03 23:26:27,261 [wrapper] pilotpid: 18778
[2025-06-03 19:26:27] 2025-06-03 23:26:27,265 [wrapper] Pilot exit status: 0
[2025-06-03 19:26:27] 2025-06-03 23:26:27,284 [wrapper] pandaids: 6677675989
[2025-06-03 19:26:27] 2025-06-03 23:26:27,328 [wrapper] cleanup supervisor_pilot 19235 18779
[2025-06-03 19:26:27] 2025-06-03 23:26:27,332 [wrapper] Test setup, not cleaning
[2025-06-03 19:26:27] 2025-06-03 23:26:27,337 [wrapper] apfmon messages muted
[2025-06-03 19:26:27] 2025-06-03 23:26:27,342 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:26:27] 2025-06-03 23:26:27,347 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:26:27]  *** Error codes and diagnostics ***
[2025-06-03 19:26:27]     "exeErrorCode": 0,
[2025-06-03 19:26:27]     "exeErrorDiag": "",
[2025-06-03 19:26:27]     "pilotErrorCode": 0,
[2025-06-03 19:26:27]     "pilotErrorDiag": "",
[2025-06-03 19:26:27]  *** Listing of results directory ***
[2025-06-03 19:26:27] total 389904
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 10:56 queuedata.json
[2025-06-03 19:26:27] -rwx------ 1 boincer umatlas     37140 Jun  3 10:57 runpilot2-wrapper.sh
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas       100 Jun  3 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:26:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 17:47 run_atlas
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas       105 Jun  3 17:47 job.xml
[2025-06-03 19:26:27] -rw-r--r-- 2 boincer umatlas 214002094 Jun  3 17:47 EVNT.45006593._001457.pool.root.1
[2025-06-03 19:26:27] -rw-r--r-- 2 boincer umatlas    508876 Jun  3 17:47 input.tar.gz
[2025-06-03 19:26:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 17:47 start_atlas.sh
[2025-06-03 19:26:27] drwxrwx--x 2 boincer umatlas      4096 Jun  3 17:47 shared
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas         0 Jun  3 17:47 boinc_lockfile
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 17:47 pandaJob.out
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas    986869 Jun  3 17:47 agis_schedconf.cvmfs.json
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas   1603667 Jun  3 17:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:26:27] drwx------ 4 boincer umatlas      4096 Jun  3 17:47 pilot3
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas      5823 Jun  3 19:20 init_data.xml
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas 179705171 Jun  3 19:25 HITS.45006595._036256.pool.root.1
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas      1049 Jun  3 19:26 memory_monitor_summary.json
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas       529 Jun  3 19:26 boinc_task_state.xml
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas        95 Jun  3 19:26 pilot_heartbeat.json
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas    307374 Jun  3 19:26 log.45006595._036256.job.log.tgz.1
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas      7739 Jun  3 19:26 heartbeat.json
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 19:26 boinc_mmap_file
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas        27 Jun  3 19:26 wrapper_checkpoint.txt
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas      4353 Jun  3 19:26 pilotlog.txt
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas    548992 Jun  3 19:26 log.45006595._036256.job.log.1
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas       357 Jun  3 19:26 output.list
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas       620 Jun  3 19:26 runtime_log
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas    880640 Jun  3 19:26 result.tar.gz
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 19:26 runtime_log.err
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas       657 Jun  3 19:26 Ay0LDmKGig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2gkKDmxPt9Mn.diag
[2025-06-03 19:26:27] -rw-r--r-- 1 boincer umatlas     21396 Jun  3 19:26 stderr.txt
[2025-06-03 19:26:27] HITS file was successfully produced:
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas 179705171 Jun  3 19:25 shared/HITS.pool.root.1
[2025-06-03 19:26:27]  *** Contents of shared directory: ***
[2025-06-03 19:26:27] total 385864
[2025-06-03 19:26:27] -rw-r--r-- 2 boincer umatlas 214002094 Jun  3 17:47 ATLAS.root_0
[2025-06-03 19:26:27] -rw-r--r-- 2 boincer umatlas    508876 Jun  3 17:47 input.tar.gz
[2025-06-03 19:26:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 17:47 start_atlas.sh
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas 179705171 Jun  3 19:25 HITS.pool.root.1
[2025-06-03 19:26:27] -rw------- 1 boincer umatlas    880640 Jun  3 19:26 result.tar.gz
19:26:29 (15121): run_atlas exited; CPU time 43645.413218
19:26:29 (15121): called boinc_finish(0)

</stderr_txt>
]]>

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