Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:32:21 (26055): wrapper (7.7.26015): starting
07:32:21 (26055): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:32:21] Arguments: --nthreads 8
[2025-06-04 07:32:21] Threads: 8
[2025-06-04 07:32:21] Checking for CVMFS
[2025-06-04 07:32:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:32:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:32:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:32:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:32:23] 2.11.2.0 24500 32958 92752 146769 3 59 16541847 25165824 3519 130560 0 16094788 99.810 19014425 4256 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:32:23] CVMFS is ok
[2025-06-04 07:32:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:32:23] Checking for apptainer binary...
[2025-06-04 07:32:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:32:23] Running /usr/bin/apptainer --version
[2025-06-04 07:32:23] apptainer version 1.3.2-1.el7
[2025-06-04 07:32:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:32:32] cg-vwn232.simple-grid.lan
[2025-06-04 07:32:32] apptainer works
[2025-06-04 07:32:32] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:32:32] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:32:32] Starting ATLAS job with PandaID=6678014777
[2025-06-04 07:32:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:36:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:36:15] 2025-06-04 09:30:00,614 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6678014777/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:36:15] 2025-06-04 09:30:00,615 | INFO     | extracted standard info from prmon json
[2025-06-04 12:36:15] 2025-06-04 09:30:00,615 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:36:15] 2025-06-04 09:30:00,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:36:15] 2025-06-04 09:30:00,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:36:15] 2025-06-04 09:30:00,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:36:15] 2025-06-04 09:30:00,620 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:36:15] 2025-06-04 09:30:00,621 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,623 | INFO     | sum of deviations: 52686303290.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,623 | INFO     | mean x: 1749022583.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,623 | INFO     | mean y: 2434950.4343891405
[2025-06-04 12:36:15] 2025-06-04 09:30:00,624 | INFO     | -- intersect: -27530137560.30729
[2025-06-04 12:36:15] 2025-06-04 09:30:00,624 | INFO     | intersect: -27530137560.30729
[2025-06-04 12:36:15] 2025-06-04 09:30:00,630 | INFO     | chi2: 5.449611969208096
[2025-06-04 12:36:15] 2025-06-04 09:30:00,631 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,633 | INFO     | sum of deviations: 65788100389.00001
[2025-06-04 12:36:15] 2025-06-04 09:30:00,633 | INFO     | mean x: 1749022430.5
[2025-06-04 12:36:15] 2025-06-04 09:30:00,633 | INFO     | mean y: 2443765.8703703703
[2025-06-04 12:36:15] 2025-06-04 09:30:00,633 | INFO     | -- intersect: -36819978729.84544
[2025-06-04 12:36:15] 2025-06-04 09:30:00,634 | INFO     | intersect: -36819978729.84544
[2025-06-04 12:36:15] 2025-06-04 09:30:00,634 | INFO     | chi2: 4.7251988917025685
[2025-06-04 12:36:15] 2025-06-04 09:30:00,634 | INFO     | current chi2=4.7251988917025685 (change=13.292929507617673 %)
[2025-06-04 12:36:15] 2025-06-04 09:30:00,634 | INFO     | right removable region: 215
[2025-06-04 12:36:15] 2025-06-04 09:30:00,635 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,636 | INFO     | sum of deviations: -17924123215.500004
[2025-06-04 12:36:15] 2025-06-04 09:30:00,637 | INFO     | mean x: 1749022735.5
[2025-06-04 12:36:15] 2025-06-04 09:30:00,637 | INFO     | mean y: 2483349.337962963
[2025-06-04 12:36:15] 2025-06-04 09:30:00,637 | INFO     | -- intersect: 10034841011.261114
[2025-06-04 12:36:15] 2025-06-04 09:30:00,637 | INFO     | intersect: 10034841011.261114
[2025-06-04 12:36:15] 2025-06-04 09:30:00,637 | INFO     | chi2: 1.3437186746465009
[2025-06-04 12:36:15] 2025-06-04 09:30:00,638 | INFO     | current chi2=1.3437186746465009 (change=75.34285592737785 %)
[2025-06-04 12:36:15] 2025-06-04 09:30:00,638 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,640 | INFO     | sum of deviations: -35334177776.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,640 | INFO     | mean x: 1749022888.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,640 | INFO     | mean y: 2495744.113744076
[2025-06-04 12:36:15] 2025-06-04 09:30:00,640 | INFO     | -- intersect: 21219030230.339397
[2025-06-04 12:36:15] 2025-06-04 09:30:00,640 | INFO     | intersect: 21219030230.339397
[2025-06-04 12:36:15] 2025-06-04 09:30:00,641 | INFO     | chi2: 0.9120669809215242
[2025-06-04 12:36:15] 2025-06-04 09:30:00,641 | INFO     | current chi2=0.9120669809215242 (change=32.1236656057142 %)
[2025-06-04 12:36:15] 2025-06-04 09:30:00,650 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 12:36:15] 2025-06-04 09:30:00,652 | INFO     | sum of deviations: -28832622919.5
[2025-06-04 12:36:15] 2025-06-04 09:30:00,652 | INFO     | mean x: 1749023040.5
[2025-06-04 12:36:15] 2025-06-04 09:30:00,653 | INFO     | mean y: 2490834.218446602
[2025-06-04 12:36:15] 2025-06-04 09:30:00,653 | INFO     | -- intersect: 18606640813.687683
[2025-06-04 12:36:15] 2025-06-04 09:30:00,653 | INFO     | intersect: 18606640813.687683
[2025-06-04 12:36:15] 2025-06-04 09:30:00,653 | INFO     | chi2: 0.8952314400590831
[2025-06-04 12:36:15] 2025-06-04 09:30:00,653 | INFO     | current chi2=0.8952314400590831 (change=1.8458667197261098 %)
[2025-06-04 12:36:15] 2025-06-04 09:30:00,653 | INFO     | left removable region: 30
[2025-06-04 12:36:15] 2025-06-04 09:30:00,654 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,655 | INFO     | sum of deviations: 2543124831.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,655 | INFO     | mean x: 1749023315.0
[2025-06-04 12:36:15] 2025-06-04 09:30:00,656 | INFO     | mean y: 2486679.054054054
[2025-06-04 12:36:15] 2025-06-04 09:30:00,656 | INFO     | -- intersect: -2263108738.122828
[2025-06-04 12:36:15] 2025-06-04 09:30:00,656 | INFO     | intersect: -2263108738.122828
[2025-06-04 12:36:15] 2025-06-04 09:30:00,656 | INFO     | chi2: 0.0005123743541554616
[2025-06-04 12:36:15] 2025-06-04 09:30:00,656 | INFO     | -- intersect: -2263108738.122828
[2025-06-04 12:36:15] 2025-06-04 09:30:00,656 | INFO     | current memory leak: 1.30 B/s (using 185 data points, chi2=0.00)
[2025-06-04 12:36:15] 2025-06-04 09:30:00,657 | INFO     | ..............................
[2025-06-04 12:36:15] 2025-06-04 09:30:00,657 | INFO     | . Timing measurements:
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . get job = 0 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . initial setup = 8 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . payload setup = 179 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . stage-in = 0 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . payload execution = 13579 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . stage-out = 4 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | . log creation = 1 s
[2025-06-04 12:36:15] 2025-06-04 09:30:00,658 | INFO     | ..............................
[2025-06-04 12:36:15] 2025-06-04 09:30:01,232 | INFO     | 
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | job summary report
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | --------------------------------------------------
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | PanDA job id: 6678014777
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | task id: 45006595
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | errors: (none)
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | pilot state: finished 
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | transexitcode: 0
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | exeerrorcode: 0
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | exeerrordiag: 
[2025-06-04 12:36:15] 2025-06-04 09:30:01,233 | INFO     | exitcode: 0
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | exitmsg: OK
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | cpuconsumptiontime: 49757 s
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | nevents: 400
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | neventsw: 0
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | pid: 6690
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | pgrp: 6690
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | corecount: 8
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | event service: False
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 87: 2405564, 93: 2405798, 98: 2406106, 1
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | --------------------------------------------------
[2025-06-04 12:36:15] 2025-06-04 09:30:01,234 | INFO     | 
[2025-06-04 12:36:15] 2025-06-04 09:30:01,235 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 12:36:15] 2025-06-04 09:30:01,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | job 6678014777 has completed (purged errors)
[2025-06-04 12:36:15] 2025-06-04 09:30:01,611 | INFO     | overall cleanup function is called
[2025-06-04 12:36:15] 2025-06-04 09:30:02,620 | INFO     | --- collectZombieJob: --- 10, [6690]
[2025-06-04 12:36:15] 2025-06-04 09:30:02,621 | INFO     | zombie collector waiting for pid 6690
[2025-06-04 12:36:15] 2025-06-04 09:30:02,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:36:15] 2025-06-04 09:30:02,621 | INFO     | collected zombie processes
[2025-06-04 12:36:15] 2025-06-04 09:30:02,621 | INFO     | will attempt to kill all subprocesses of pid=6690
[2025-06-04 12:36:15] 2025-06-04 09:30:02,740 | INFO     | process IDs to be killed: [6690] (in reverse order)
[2025-06-04 12:36:15] 2025-06-04 09:30:03,634 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:36:15] 2025-06-04 09:30:03,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:36:15] 2025-06-04 09:30:03,638 | INFO     | did not find any defunct processes belonging to 6690
[2025-06-04 12:36:15] 2025-06-04 09:30:03,642 | INFO     | did not find any defunct processes belonging to 6690
[2025-06-04 12:36:15] 2025-06-04 09:30:03,643 | INFO     | ready for new job
[2025-06-04 12:36:15] 2025-06-04 09:30:03,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:36:15] 2025-06-04 09:30:03,645 | INFO     | **************************************
[2025-06-04 12:36:15] 2025-06-04 09:30:03,645 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:36:15] 2025-06-04 09:30:03,645 | INFO     | **************************************
[2025-06-04 12:36:15] 2025-06-04 09:30:03,645 | INFO     | 
[2025-06-04 12:36:15] 2025-06-04 09:30:03,646 | INFO     | pilot is running in a VM
[2025-06-04 12:36:15] 2025-06-04 09:30:03,646 | INFO     | architecture information:
[2025-06-04 12:36:15] 2025-06-04 09:30:03,649 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:36:15] 2025-06-04 09:30:03,838 | INFO     | cat /etc/os-release:
[2025-06-04 12:36:15] NAME="CentOS Linux"
[2025-06-04 12:36:15] VERSION="7 (Core)"
[2025-06-04 12:36:15] ID="centos"
[2025-06-04 12:36:15] ID_LIKE="rhel fedora"
[2025-06-04 12:36:15] VERSION_ID="7"
[2025-06-04 12:36:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:36:15] ANSI_COLOR="0;31"
[2025-06-04 12:36:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:36:15] HOME_URL="https://www.centos.org/"
[2025-06-04 12:36:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:36:15] 
[2025-06-04 12:36:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:36:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:36:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:36:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:36:15] 
[2025-06-04 12:36:15] 2025-06-04 09:30:03,838 | INFO     | **************************************
[2025-06-04 12:36:15] 2025-06-04 09:30:04,342 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 12:36:15] 2025-06-04 09:30:04,578 | INFO     | sufficient remaining disk space (497075355648 B)
[2025-06-04 12:36:15] 2025-06-04 09:30:04,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:36:15] 2025-06-04 09:30:04,579 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:36:15] 2025-06-04 09:30:04,579 | INFO     | update_server=False
[2025-06-04 12:36:15] 2025-06-04 09:30:04,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:36:15] 2025-06-04 09:30:04,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:36:15] 2025-06-04 09:30:05,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:36:15] 2025-06-04 09:30:05,071 | INFO     | aborting loop
[2025-06-04 12:36:15] 2025-06-04 09:30:05,141 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:36:15] 2025-06-04 09:30:05,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:36:15] 2025-06-04 09:30:05,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:36:15] 2025-06-04 09:30:05,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:36:15] 2025-06-04 09:30:05,586 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:05,670 | INFO     | all data control threads have been joined
[2025-06-04 12:36:15] 2025-06-04 09:30:05,728 | INFO     | all payload control threads have been joined
[2025-06-04 12:36:15] 2025-06-04 09:30:05,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:36:15] 2025-06-04 09:30:05,868 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:05,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:05,881 | INFO     | [job] validate thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,068 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,076 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,168 | INFO     | all job control threads have been joined
[2025-06-04 12:36:15] 2025-06-04 09:30:06,238 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,445 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,586 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,616 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,676 | INFO     | [data] control thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,734 | INFO     | [payload] control thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:06,867 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:07,016 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:07,174 | INFO     | [job] control thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:09,308 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:36:15] 2025-06-04 09:30:10,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383116429120)>', '<ExcThread(monitor, started 140382532785920)>']
[2025-06-04 12:36:15] 2025-06-04 09:30:11,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:36:15] 2025-06-04 09:30:11,176 | INFO     | [monitor] control thread has ended
[2025-06-04 12:36:15] 2025-06-04 09:30:15,411 | INFO     | all workflow threads have been joined
[2025-06-04 12:36:15] 2025-06-04 09:30:15,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:36:15] 2025-06-04 09:30:15,412 | INFO     | traces error code: 0
[2025-06-04 12:36:15] 2025-06-04 09:30:15,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:36:15] 2025-06-04 09:30:15,788 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:36:15] 2025-06-04 09:30:15,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:36:15] 2025-06-04 09:30:15,960 [wrapper] pilotpid: 30477
[2025-06-04 12:36:15] 2025-06-04 09:30:16,058 [wrapper] Pilot exit status: 0
[2025-06-04 12:36:15] 2025-06-04 09:30:16,309 [wrapper] pandaids: 6678014777
[2025-06-04 12:36:15] 2025-06-04 09:30:16,856 [wrapper] cleanup supervisor_pilot 23600 30478
[2025-06-04 12:36:15] 2025-06-04 09:30:16,912 [wrapper] Test setup, not cleaning
[2025-06-04 12:36:15] 2025-06-04 09:30:16,999 [wrapper] apfmon messages muted
[2025-06-04 12:36:15] 2025-06-04 09:30:17,044 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:36:15] 2025-06-04 09:30:17,149 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:36:15]  *** Error codes and diagnostics ***
[2025-06-04 12:36:15]     "exeErrorCode": 0,
[2025-06-04 12:36:15]     "exeErrorDiag": "",
[2025-06-04 12:36:15]     "pilotErrorCode": 0,
[2025-06-04 12:36:15]     "pilotErrorDiag": "",
[2025-06-04 12:36:15]  *** Listing of results directory ***
[2025-06-04 12:36:15] total 391876
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:02 queuedata.json
[2025-06-04 12:36:15] -rwx------. 1 boinc boinc     37140 Jun  3 22:03 runpilot2-wrapper.sh
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:36:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:32 run_atlas
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:32 job.xml
[2025-06-04 12:36:15] -rw-r--r--. 2 boinc boinc 217338279 Jun  4 07:32 EVNT.45006593._001778.pool.root.1
[2025-06-04 12:36:15] -rw-r--r--. 2 boinc boinc    508877 Jun  4 07:32 input.tar.gz
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc      6392 Jun  4 07:32 init_data.xml
[2025-06-04 12:36:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:32 start_atlas.sh
[2025-06-04 12:36:15] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:32 shared
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:32 boinc_lockfile
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:32 pandaJob.out
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc    986745 Jun  4 07:35 agis_schedconf.cvmfs.json
[2025-06-04 12:36:15] drwx------. 4 boinc boinc      4096 Jun  4 07:35 pilot3
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc 176979672 Jun  4 11:27 HITS.45006595._044372.pool.root.1
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:27 boinc_task_state.xml
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc      1018 Jun  4 11:28 memory_monitor_summary.json
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc   1603667 Jun  4 11:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc    377175 Jun  4 11:28 log.45006595._044372.job.log.tgz.1
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc        95 Jun  4 11:29 pilot_heartbeat.json
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc      7691 Jun  4 11:30 heartbeat.json
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc      4416 Jun  4 11:30 pilotlog.txt
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc   1194876 Jun  4 11:30 log.45006595._044372.job.log.1
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc       357 Jun  4 11:30 output.list
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:30 runtime_log
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc   1587200 Jun  4 11:30 result.tar.gz
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:30 runtime_log.err
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc       657 Jun  4 11:30 QN1MDmz1mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRylKDmmBkLOm.diag
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:36 boinc_mmap_file
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:36 wrapper_checkpoint.txt
[2025-06-04 12:36:15] -rw-r--r--. 1 boinc boinc     20516 Jun  4 12:36 stderr.txt
[2025-06-04 12:36:15] HITS file was successfully produced:
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc 176979672 Jun  4 11:27 shared/HITS.pool.root.1
[2025-06-04 12:36:15]  *** Contents of shared directory: ***
[2025-06-04 12:36:15] total 387148
[2025-06-04 12:36:15] -rw-r--r--. 2 boinc boinc 217338279 Jun  4 07:32 ATLAS.root_0
[2025-06-04 12:36:15] -rw-r--r--. 2 boinc boinc    508877 Jun  4 07:32 input.tar.gz
[2025-06-04 12:36:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:32 start_atlas.sh
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc 176979672 Jun  4 11:27 HITS.pool.root.1
[2025-06-04 12:36:15] -rw-------. 1 boinc boinc   1587200 Jun  4 11:30 result.tar.gz
12:36:17 (26055): run_atlas exited; CPU time 49954.181610
12:36:17 (26055): called boinc_finish(0)

</stderr_txt>
]]>

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