Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:58:00 (1124320): wrapper (7.7.26015): starting
09:58:00 (1124320): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 09:58:00] Arguments: --nthreads 12
[2025-06-05 09:58:00] Threads: 12
[2025-06-05 09:58:00] Checking for CVMFS
[2025-06-05 09:58:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:58:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:58:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:58:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:58:04] 2.12.7.0 16265 3028 64736 146814 3 56 2461982 4096000 912 130560 0 2988479 99.992 783736 171 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 09:58:04] CVMFS is ok
[2025-06-05 09:58:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:58:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 09:58:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 09:58:04] Further information can be found at the LHC@home message board.
[2025-06-05 09:58:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:58:04] Checking for apptainer binary...
[2025-06-05 09:58:04] apptainer is not installed, using version from CVMFS
[2025-06-05 09:58:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:58:06] gg3250
[2025-06-05 09:58:06] apptainer works
[2025-06-05 09:58:06] Set ATHENA_PROC_NUMBER=12
[2025-06-05 09:58:06] Set ATHENA_CORE_NUMBER=12
[2025-06-05 09:58:06] Starting ATLAS job with PandaID=6677784746
[2025-06-05 09:58:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:46:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:46:16] 2025-06-05 12:46:02,112 | INFO     | extracted standard info from prmon json
[2025-06-05 12:46:16] 2025-06-05 12:46:02,112 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:46:16] 2025-06-05 12:46:02,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:46:16] 2025-06-05 12:46:02,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:46:16] 2025-06-05 12:46:02,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:46:16] 2025-06-05 12:46:02,123 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:46:16] 2025-06-05 12:46:02,124 | INFO     | sum of square deviations: 1342837286.9938686
[2025-06-05 12:46:16] 2025-06-05 12:46:02,124 | INFO     | sum of deviations: 14442946294.03069
[2025-06-05 12:46:16] 2025-06-05 12:46:02,124 | INFO     | mean x: 1749122513.006135
[2025-06-05 12:46:16] 2025-06-05 12:46:02,125 | INFO     | mean y: 2633133.969325153
[2025-06-05 12:46:16] 2025-06-05 12:46:02,125 | INFO     | -- intersect: -18810132017.63087
[2025-06-05 12:46:16] 2025-06-05 12:46:02,125 | INFO     | intersect: -18810132017.63087
[2025-06-05 12:46:16] 2025-06-05 12:46:02,125 | INFO     | chi2: 2.521969079580779
[2025-06-05 12:46:16] 2025-06-05 12:46:02,125 | INFO     | sum of square deviations: 1223012089.4936707
[2025-06-05 12:46:16] 2025-06-05 12:46:02,126 | INFO     | sum of deviations: 24854320946.265835
[2025-06-05 12:46:16] 2025-06-05 12:46:02,126 | INFO     | mean x: 1749122360.506329
[2025-06-05 12:46:16] 2025-06-05 12:46:02,126 | INFO     | mean y: 2646036.234177215
[2025-06-05 12:46:16] 2025-06-05 12:46:02,126 | INFO     | -- intersect: -35543403668.23964
[2025-06-05 12:46:16] 2025-06-05 12:46:02,126 | INFO     | intersect: -35543403668.23964
[2025-06-05 12:46:16] 2025-06-05 12:46:02,131 | INFO     | chi2: 1.8235729346151648
[2025-06-05 12:46:16] 2025-06-05 12:46:02,131 | INFO     | current chi2=1.8235729346151648 (change=27.692494353725667 %)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,131 | INFO     | sum of square deviations: 1110535866.9934604
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | sum of deviations: 24060171532.856213
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | mean x: 1749122208.006536
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | mean y: 2644959.1437908495
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | -- intersect: -37892736547.53318
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | intersect: -37892736547.53318
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | chi2: 1.825879568152292
[2025-06-05 12:46:16] 2025-06-05 12:46:02,132 | INFO     | current chi2=1.825879568152292 (change=-0.12648978789619403 %)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,133 | INFO     | right removable region: 152
[2025-06-05 12:46:16] 2025-06-05 12:46:02,133 | INFO     | sum of square deviations: 1223011479.4936707
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | sum of deviations: -17864958395.873413
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | mean x: 1749122665.506329
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | mean y: 2673839.3734177216
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | -- intersect: 25552723182.725876
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | intersect: 25552723182.725876
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | chi2: 0.772200724580184
[2025-06-05 12:46:16] 2025-06-05 12:46:02,134 | INFO     | current chi2=0.772200724580184 (change=69.38103917164024 %)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,139 | INFO     | sum of square deviations: 1110534646.9934604
[2025-06-05 12:46:16] 2025-06-05 12:46:02,139 | INFO     | sum of deviations: -14647853089.777779
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | mean x: 1749122818.006536
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | mean y: 2669462.777777778
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | -- intersect: 23073443655.641594
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | intersect: 23073443655.641594
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | chi2: 0.7663115684290338
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | current chi2=0.7663115684290338 (change=0.762645768605289 %)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,140 | INFO     | left removable region: 20
[2025-06-05 12:46:16] 2025-06-05 12:46:02,141 | INFO     | sum of square deviations: 713135628.9924244
[2025-06-05 12:46:16] 2025-06-05 12:46:02,141 | INFO     | sum of deviations: 2567732561.03788
[2025-06-05 12:46:16] 2025-06-05 12:46:02,141 | INFO     | mean x: 1749122787.5075758
[2025-06-05 12:46:16] 2025-06-05 12:46:02,141 | INFO     | mean y: 2673544.462121212
[2025-06-05 12:46:16] 2025-06-05 12:46:02,141 | INFO     | -- intersect: -6295258226.359911
[2025-06-05 12:46:16] 2025-06-05 12:46:02,142 | INFO     | intersect: -6295258226.359911
[2025-06-05 12:46:16] 2025-06-05 12:46:02,142 | INFO     | chi2: 0.0007683611665205231
[2025-06-05 12:46:16] 2025-06-05 12:46:02,142 | INFO     | -- intersect: -6295258226.359911
[2025-06-05 12:46:16] 2025-06-05 12:46:02,142 | INFO     | current memory leak: 3.60 B/s (using 132 data points, chi2=0.00)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,146 | INFO     | ..............................
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . Timing measurements:
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . get job = 0 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . initial setup = 1 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . payload setup = 3 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . stage-in = 0 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . payload execution = 9914 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . stage-out = 1 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | . log creation = 0 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,147 | INFO     | ..............................
[2025-06-05 12:46:16] 2025-06-05 12:46:02,318 | INFO     | 
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | job summary report
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | --------------------------------------------------
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | PanDA job id: 6677784746
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | task id: 45006595
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | errors: (none)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | pilot state: finished 
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | transexitcode: 0
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | exeerrorcode: 0
[2025-06-05 12:46:16] 2025-06-05 12:46:02,319 | INFO     | exeerrordiag: 
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | exitcode: 0
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | exitmsg: OK
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | cpuconsumptiontime: 35207 s
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | nevents: 400
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | neventsw: 0
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | pid: 1136416
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | pgrp: 1136416
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | corecount: 12
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | event service: False
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | sizes: {0: 2397365, 2: 2397571, 11: 2397599, 9922: 2425985, 9925: 2434972, 9928: 2435028, 9996: 2435326}
[2025-06-05 12:46:16] 2025-06-05 12:46:02,320 | INFO     | --------------------------------------------------
[2025-06-05 12:46:16] 2025-06-05 12:46:02,321 | INFO     | 
[2025-06-05 12:46:16] 2025-06-05 12:46:02,321 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-05 12:46:16] 2025-06-05 12:46:02,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | job 6677784746 has completed (purged errors)
[2025-06-05 12:46:16] 2025-06-05 12:46:02,357 | INFO     | overall cleanup function is called
[2025-06-05 12:46:16] 2025-06-05 12:46:03,363 | INFO     | --- collectZombieJob: --- 10, [1136416]
[2025-06-05 12:46:16] 2025-06-05 12:46:03,363 | INFO     | zombie collector waiting for pid 1136416
[2025-06-05 12:46:16] 2025-06-05 12:46:03,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:46:16] 2025-06-05 12:46:03,363 | INFO     | collected zombie processes
[2025-06-05 12:46:16] 2025-06-05 12:46:03,363 | INFO     | will attempt to kill all subprocesses of pid=1136416
[2025-06-05 12:46:16] 2025-06-05 12:46:03,494 | INFO     | process IDs to be killed: [1136416] (in reverse order)
[2025-06-05 12:46:16] 2025-06-05 12:46:03,648 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:46:16] 2025-06-05 12:46:03,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:46:16] 2025-06-05 12:46:03,650 | INFO     | did not find any defunct processes belonging to 1136416
[2025-06-05 12:46:16] 2025-06-05 12:46:03,652 | INFO     | did not find any defunct processes belonging to 1136416
[2025-06-05 12:46:16] 2025-06-05 12:46:03,652 | INFO     | ready for new job
[2025-06-05 12:46:16] 2025-06-05 12:46:03,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:46:16] 2025-06-05 12:46:03,653 | INFO     | **************************************
[2025-06-05 12:46:16] 2025-06-05 12:46:03,653 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:46:16] 2025-06-05 12:46:03,653 | INFO     | **************************************
[2025-06-05 12:46:16] 2025-06-05 12:46:03,653 | INFO     | 
[2025-06-05 12:46:16] 2025-06-05 12:46:03,675 | INFO     | architecture information:
[2025-06-05 12:46:16] 2025-06-05 12:46:03,687 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:46:16] 2025-06-05 12:46:03,809 | INFO     | cat /etc/os-release:
[2025-06-05 12:46:16] NAME="CentOS Linux"
[2025-06-05 12:46:16] VERSION="7 (Core)"
[2025-06-05 12:46:16] ID="centos"
[2025-06-05 12:46:16] ID_LIKE="rhel fedora"
[2025-06-05 12:46:16] VERSION_ID="7"
[2025-06-05 12:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:46:16] ANSI_COLOR="0;31"
[2025-06-05 12:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:46:16] HOME_URL="https://www.centos.org/"
[2025-06-05 12:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:46:16] 
[2025-06-05 12:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:46:16] 
[2025-06-05 12:46:16] 2025-06-05 12:46:03,809 | INFO     | **************************************
[2025-06-05 12:46:16] 2025-06-05 12:46:04,315 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-05 12:46:16] 2025-06-05 12:46:04,399 | INFO     | sufficient remaining disk space (71215087616 B)
[2025-06-05 12:46:16] 2025-06-05 12:46:04,399 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:46:16] 2025-06-05 12:46:04,399 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:46:16] 2025-06-05 12:46:04,399 | INFO     | update_server=False
[2025-06-05 12:46:16] 2025-06-05 12:46:04,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:46:16] 2025-06-05 12:46:04,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:46:16] 2025-06-05 12:46:04,400 | INFO     | aborting loop
[2025-06-05 12:46:16] 2025-06-05 12:46:04,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:46:16] 2025-06-05 12:46:04,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:46:16] 2025-06-05 12:46:05,082 | INFO     | PID=1127931 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 12:46:16] 2025-06-05 12:46:05,082 | INFO     | .. there are 2 such processes running
[2025-06-05 12:46:16] 2025-06-05 12:46:05,087 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:46:16] 2025-06-05 12:46:05,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:46:16] 2025-06-05 12:46:05,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:46:16] 2025-06-05 12:46:05,298 | INFO     | all data control threads have been joined
[2025-06-05 12:46:16] 2025-06-05 12:46:05,374 | INFO     | all payload control threads have been joined
[2025-06-05 12:46:16] 2025-06-05 12:46:05,403 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:05,403 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:05,475 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:05,499 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:05,519 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:05,522 | INFO     | all job control threads have been joined
[2025-06-05 12:46:16] 2025-06-05 12:46:05,523 | INFO     | [job] validate thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:05,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,071 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,307 | INFO     | [data] control thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,355 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,383 | INFO     | [payload] control thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,519 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,527 | INFO     | [job] control thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:06,839 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:07,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:46:16] 2025-06-05 12:46:08,351 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:08,415 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:46:16] 2025-06-05 12:46:09,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431347771200)>', '<ExcThread(monitor, started 140430909884160)>']
[2025-06-05 12:46:16] 2025-06-05 12:46:10,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:46:16] 2025-06-05 12:46:10,127 | INFO     | [monitor] control thread has ended
[2025-06-05 12:46:16] 2025-06-05 12:46:14,559 | INFO     | all workflow threads have been joined
[2025-06-05 12:46:16] 2025-06-05 12:46:14,559 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:46:16] 2025-06-05 12:46:14,559 | INFO     | traces error code: 0
[2025-06-05 12:46:16] 2025-06-05 12:46:14,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:46:16] 2025-06-05 12:46:14,879 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:46:16] 2025-06-05 12:46:14,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:46:16] 2025-06-05 12:46:14,947 [wrapper] pilotpid: 1127931
[2025-06-05 12:46:16] 2025-06-05 12:46:14,991 [wrapper] Pilot exit status: 0
[2025-06-05 12:46:16] 2025-06-05 12:46:15,115 [wrapper] pandaids: 6677784746
[2025-06-05 12:46:16] 2025-06-05 12:46:15,179 [wrapper] cleanup supervisor_pilot 1184287 1127932
[2025-06-05 12:46:16] 2025-06-05 12:46:15,196 [wrapper] Test setup, not cleaning
[2025-06-05 12:46:16] 2025-06-05 12:46:15,251 [wrapper] apfmon messages muted
[2025-06-05 12:46:16] 2025-06-05 12:46:15,287 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:46:16] 2025-06-05 12:46:15,319 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:46:16]  *** Error codes and diagnostics ***
[2025-06-05 12:46:16]     "exeErrorCode": 0,
[2025-06-05 12:46:16]     "exeErrorDiag": "",
[2025-06-05 12:46:16]     "pilotErrorCode": 0,
[2025-06-05 12:46:16]     "pilotErrorDiag": "",
[2025-06-05 12:46:16]  *** Listing of results directory ***
[2025-06-05 12:46:16] total 382716
[2025-06-05 12:46:16] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:42 pilot3.tar.gz
[2025-06-05 12:46:16] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:51 queuedata.json
[2025-06-05 12:46:16] -rwx------ 1 boinc boinc     37140 Jun  3 16:51 runpilot2-wrapper.sh
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc       100 Jun  5 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:46:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 09:58 run_atlas
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc       105 Jun  5 09:58 job.xml
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc      9360 Jun  5 09:58 init_data.xml
[2025-06-05 12:46:16] -rw-r--r-- 2 boinc boinc 213080092 Jun  5 09:58 EVNT.45006593._001578.pool.root.1
[2025-06-05 12:46:16] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:58 start_atlas.sh
[2025-06-05 12:46:16] drwxrwx--x 2 boinc boinc      4096 Jun  5 09:58 shared
[2025-06-05 12:46:16] -rw-r--r-- 2 boinc boinc    508881 Jun  5 09:58 input.tar.gz
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc         0 Jun  5 09:58 boinc_lockfile
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 09:58 pandaJob.out
[2025-06-05 12:46:16] -rw------- 1 boinc boinc    983289 Jun  5 09:59 agis_schedconf.cvmfs.json
[2025-06-05 12:46:16] -rw------- 1 boinc boinc   1598969 Jun  5 09:59 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:46:16] drwx------ 4 boinc boinc      4096 Jun  5 09:59 pilot3
[2025-06-05 12:46:16] -rw------- 1 boinc boinc 172252663 Jun  5 12:43 HITS.45006595._039350.pool.root.1
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc       529 Jun  5 12:44 boinc_task_state.xml
[2025-06-05 12:46:16] -rw------- 1 boinc boinc      1018 Jun  5 12:44 memory_monitor_summary.json
[2025-06-05 12:46:16] -rw------- 1 boinc boinc    418985 Jun  5 12:44 log.45006595._039350.job.log.tgz.1
[2025-06-05 12:46:16] -rw------- 1 boinc boinc        95 Jun  5 12:45 pilot_heartbeat.json
[2025-06-05 12:46:16] -rw------- 1 boinc boinc      7656 Jun  5 12:46 heartbeat.json
[2025-06-05 12:46:16] -rw------- 1 boinc boinc      4770 Jun  5 12:46 pilotlog.txt
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 12:46 boinc_mmap_file
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc        28 Jun  5 12:46 wrapper_checkpoint.txt
[2025-06-05 12:46:16] -rw------- 1 boinc boinc    948294 Jun  5 12:46 log.45006595._039350.job.log.1
[2025-06-05 12:46:16] -rw------- 1 boinc boinc       357 Jun  5 12:46 output.list
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc       620 Jun  5 12:46 runtime_log
[2025-06-05 12:46:16] -rw------- 1 boinc boinc   1382400 Jun  5 12:46 result.tar.gz
[2025-06-05 12:46:16] -rw------- 1 boinc boinc       652 Jun  5 12:46 UoALDmP2jg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGKZKDmqoaLRo.diag
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc      8954 Jun  5 12:46 runtime_log.err
[2025-06-05 12:46:16] -rw-rw-r-- 1 boinc boinc     21080 Jun  5 12:46 stderr.txt
[2025-06-05 12:46:16] HITS file was successfully produced:
[2025-06-05 12:46:16] -rw------- 1 boinc boinc 172252663 Jun  5 12:43 shared/HITS.pool.root.1
[2025-06-05 12:46:16]  *** Contents of shared directory: ***
[2025-06-05 12:46:16] total 378180
[2025-06-05 12:46:16] -rw-r--r-- 2 boinc boinc 213080092 Jun  5 09:58 ATLAS.root_0
[2025-06-05 12:46:16] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:58 start_atlas.sh
[2025-06-05 12:46:16] -rw-r--r-- 2 boinc boinc    508881 Jun  5 09:58 input.tar.gz
[2025-06-05 12:46:16] -rw------- 1 boinc boinc 172252663 Jun  5 12:43 HITS.pool.root.1
[2025-06-05 12:46:16] -rw------- 1 boinc boinc   1382400 Jun  5 12:46 result.tar.gz
12:46:17 (1124320): run_atlas exited; CPU time 35276.639591
12:46:17 (1124320): called boinc_finish(0)

</stderr_txt>
]]>

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