Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:52:39 (3566741): wrapper (7.7.26015): starting
14:52:39 (3566741): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 14:52:39] Arguments: --nthreads 12
[2025-06-03 14:52:39] Threads: 12
[2025-06-03 14:52:39] Checking for CVMFS
[2025-06-03 14:52:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:52:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:52:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:52:40] 2.11.5.0 3943993 32239 319116 146757 0 242 32825286 45568001 15438 130560 0 319126257 99.789 199134665 26971 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 14:52:40] CVMFS is ok
[2025-06-03 14:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:52:40] Further information can be found at the LHC@home message board.
[2025-06-03 14:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:52:40] Checking for apptainer binary...
[2025-06-03 14:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:52:40] Running /usr/bin/apptainer --version
[2025-06-03 14:52:41] apptainer version 1.4.0-1.el9
[2025-06-03 14:52:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:52:42] wns0081.triumf.lcg
[2025-06-03 14:52:42] apptainer works
[2025-06-03 14:52:42] Set ATHENA_PROC_NUMBER=12
[2025-06-03 14:52:42] Set ATHENA_CORE_NUMBER=12
[2025-06-03 14:52:42] Starting ATLAS job with PandaID=6678014582
[2025-06-03 14:52:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:58:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678014582/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | extracted standard info from prmon json
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | wrong length of table data, x=[1748987678.0], y=[890.0] (must be same and length>=4)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | ..............................
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . Timing measurements:
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . get job = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . initial setup = 3 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . payload setup = 21 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . stage-in = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . payload execution = 70 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . stage-out = 1 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . log creation = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | ..............................
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678014582/pilotlog.txt
[2025-06-03 14:58:07] 2025-06-03 21:57:51,586 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 14:58:07] - Log from pilotlog.txt -
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678014582/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | extracted standard info from prmon json
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | wrong length of table data, x=[1748987678.0], y=[890.0] (must be same and length>=4)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | ..............................
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . Timing measurements:
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . get job = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . initial setup = 3 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . payload setup = 21 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . stage-in = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . payload execution = 70 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . stage-out = 1 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . log creation = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | ..............................
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678014582/pilotlog.txt
[2025-06-03 14:58:07] 2025-06-03 21:57:51,587 | WARNING  | 
[2025-06-03 14:58:07] [begin log extracts]
[2025-06-03 14:58:07] - Log from pilotlog.txt -
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678014582/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | extracted standard info from prmon json
[2025-06-03 14:58:07] 2025-06-03 21:57:51,518 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:58:07] 2025-06-03 21:57:51,519 | WARNING  | wrong length of table data, x=[1748987678.0], y=[890.0] (must be same and length>=4)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | ..............................
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . Timing measurements:
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . get job = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . initial setup = 3 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . payload setup = 21 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . stage-in = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . payload execution = 70 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . stage-out = 1 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | . log creation = 0 s
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | ..............................
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 14:58:07] 2025-06-03 21:57:51,520 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678014582/pilotlog.txt
[2025-06-03 14:58:07] [end log extracts]
[2025-06-03 14:58:07] 2025-06-03 21:57:51,587 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 14:58:07] 2025-06-03 21:57:51,587 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 14:58:07] 2025-06-03 21:57:52,262 | INFO     | 
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | job summary report
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | --------------------------------------------------
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | PanDA job id: 6678014582
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | task id: 45006595
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 14:55:21,761 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | pilot state: failed 
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | transexitcode: 65
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | exeerrorcode: 65
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | exitcode: 65
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | cpuconsumptiontime: 18 s
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | nevents: 0
[2025-06-03 14:58:07] 2025-06-03 21:57:52,263 | INFO     | neventsw: 0
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | pid: 3590433
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | pgrp: 3590433
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | corecount: 12
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | event service: False
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | sizes: {0: 2404954, 1: 2405209, 13: 2405209, 20: 2405471, 24: 2405499, 95: 2428836, 97: 2433071, 100: 2433099, 234: 2433241}
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | --------------------------------------------------
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | 
[2025-06-03 14:58:07] 2025-06-03 21:57:52,264 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 14:58:07] 2025-06-03 21:57:52,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:58:07] 2025-06-03 21:57:52,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:58:07] 2025-06-03 21:57:52,419 | INFO     | job 6678014582 has completed (purged errors)
[2025-06-03 14:58:07] 2025-06-03 21:57:52,419 | INFO     | overall cleanup function is called
[2025-06-03 14:58:07] 2025-06-03 21:57:53,426 | INFO     | --- collectZombieJob: --- 10, [3590433]
[2025-06-03 14:58:07] 2025-06-03 21:57:53,426 | INFO     | zombie collector waiting for pid 3590433
[2025-06-03 14:58:07] 2025-06-03 21:57:53,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:58:07] 2025-06-03 21:57:53,426 | INFO     | collected zombie processes
[2025-06-03 14:58:07] 2025-06-03 21:57:53,426 | INFO     | will attempt to kill all subprocesses of pid=3590433
[2025-06-03 14:58:07] 2025-06-03 21:57:53,930 | INFO     | process IDs to be killed: [3590433] (in reverse order)
[2025-06-03 14:58:07] 2025-06-03 21:57:54,603 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:58:07] 2025-06-03 21:57:54,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:58:07] 2025-06-03 21:57:54,640 | INFO     | did not find any defunct processes belonging to 3590433
[2025-06-03 14:58:07] 2025-06-03 21:57:54,684 | INFO     | did not find any defunct processes belonging to 3590433
[2025-06-03 14:58:07] 2025-06-03 21:57:54,685 | INFO     | ready for new job
[2025-06-03 14:58:07] 2025-06-03 21:57:54,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:58:07] 2025-06-03 21:57:54,686 | INFO     | **************************************
[2025-06-03 14:58:07] 2025-06-03 21:57:54,686 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:58:07] 2025-06-03 21:57:54,686 | INFO     | **************************************
[2025-06-03 14:58:07] 2025-06-03 21:57:54,686 | INFO     | 
[2025-06-03 14:58:07] 2025-06-03 21:57:54,688 | INFO     | architecture information:
[2025-06-03 14:58:07] 2025-06-03 21:57:54,709 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:58:07] 2025-06-03 21:57:54,771 | INFO     | cat /etc/os-release:
[2025-06-03 14:58:07] NAME="CentOS Linux"
[2025-06-03 14:58:07] VERSION="7 (Core)"
[2025-06-03 14:58:07] ID="centos"
[2025-06-03 14:58:07] ID_LIKE="rhel fedora"
[2025-06-03 14:58:07] VERSION_ID="7"
[2025-06-03 14:58:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:58:07] ANSI_COLOR="0;31"
[2025-06-03 14:58:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:58:07] HOME_URL="https://www.centos.org/"
[2025-06-03 14:58:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:58:07] 
[2025-06-03 14:58:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:58:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:58:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:58:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:58:07] 
[2025-06-03 14:58:07] 2025-06-03 21:57:54,771 | INFO     | **************************************
[2025-06-03 14:58:07] 2025-06-03 21:57:55,274 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 14:58:07] 2025-06-03 21:57:55,323 | INFO     | sufficient remaining disk space (1904491888640 B)
[2025-06-03 14:58:07] 2025-06-03 21:57:55,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:58:07] 2025-06-03 21:57:55,323 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:58:07] 2025-06-03 21:57:55,323 | INFO     | update_server=False
[2025-06-03 14:58:07] 2025-06-03 21:57:55,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:58:07] 2025-06-03 21:57:55,323 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:58:07] 2025-06-03 21:57:55,324 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:58:07] 2025-06-03 21:57:55,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:58:07] 2025-06-03 21:57:55,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:58:07] 2025-06-03 21:57:55,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:58:07] 2025-06-03 21:57:55,324 | INFO     | aborting loop
[2025-06-03 14:58:07] 2025-06-03 21:57:55,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:58:07] 2025-06-03 21:57:55,843 | INFO     | all data control threads have been joined
[2025-06-03 14:58:07] 2025-06-03 21:57:56,003 | INFO     | all job control threads have been joined
[2025-06-03 14:58:07] 2025-06-03 21:57:56,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:58:07] 2025-06-03 21:57:56,329 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:56,330 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:56,332 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:56,403 | INFO     | all payload control threads have been joined
[2025-06-03 14:58:07] 2025-06-03 21:57:56,686 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:56,849 | INFO     | [data] control thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:56,996 | INFO     | [job] validate thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,009 | INFO     | [job] control thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:58:07] 2025-06-03 21:57:57,275 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,302 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,367 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,409 | INFO     | [payload] control thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,436 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:57,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:58,281 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:58,331 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:57:59,681 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:58:07] 2025-06-03 21:58:01,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639651612480)>', '<ExcThread(monitor, started 139638941394688)>']
[2025-06-03 14:58:07] 2025-06-03 21:58:01,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:58:07] 2025-06-03 21:58:01,360 | INFO     | [monitor] control thread has ended
[2025-06-03 14:58:07] 2025-06-03 21:58:06,352 | INFO     | all workflow threads have been joined
[2025-06-03 14:58:07] 2025-06-03 21:58:06,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:58:07] 2025-06-03 21:58:06,353 | INFO     | traces error code: 0
[2025-06-03 14:58:07] 2025-06-03 21:58:06,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:58:07] 2025-06-03 21:58:06,668 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:58:07] 2025-06-03 21:58:06,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:58:07] 2025-06-03 21:58:06,680 [wrapper] pilotpid: 3572655
[2025-06-03 14:58:07] 2025-06-03 21:58:06,685 [wrapper] Pilot exit status: 0
[2025-06-03 14:58:07] 2025-06-03 21:58:06,811 [wrapper] pandaids: 6678014582
[2025-06-03 14:58:07] 2025-06-03 21:58:06,972 [wrapper] cleanup supervisor_pilot 3572683 3572656
[2025-06-03 14:58:07] 2025-06-03 21:58:06,980 [wrapper] Test setup, not cleaning
[2025-06-03 14:58:07] 2025-06-03 21:58:07,010 [wrapper] apfmon messages muted
[2025-06-03 14:58:07] 2025-06-03 21:58:07,019 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:58:07] 2025-06-03 21:58:07,036 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:58:07]  *** Error codes and diagnostics ***
[2025-06-03 14:58:07]     "exeErrorCode": 65,
[2025-06-03 14:58:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 14:58:07]     "pilotErrorCode": 1305,
[2025-06-03 14:58:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 14:58:07]  *** Listing of results directory ***
[2025-06-03 14:58:07] total 214468
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:41 pilot3.tar.gz
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:57 queuedata.json
[2025-06-03 14:58:07] -rwx------. 1 boinc boinc     37140 Jun  3 12:57 runpilot2-wrapper.sh
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:58:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:52 run_atlas
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:52 job.xml
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc      6601 Jun  3 14:52 init_data.xml
[2025-06-03 14:58:07] -rw-r--r--. 2 boinc boinc 215572751 Jun  3 14:52 EVNT.45006593._001770.pool.root.1
[2025-06-03 14:58:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:52 start_atlas.sh
[2025-06-03 14:58:07] drwxrwx--x. 2 boinc boinc      4096 Jun  3 14:52 shared
[2025-06-03 14:58:07] -rw-r--r--. 2 boinc boinc    508878 Jun  3 14:52 input.tar.gz
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:52 boinc_lockfile
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc      2525 Jun  3 14:52 pandaJob.out
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc    986869 Jun  3 14:53 agis_schedconf.cvmfs.json
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc   1603667 Jun  3 14:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:58:07] drwx------. 4 boinc boinc      4096 Jun  3 14:53 pilot3
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc       524 Jun  3 14:55 boinc_task_state.xml
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc       951 Jun  3 14:55 memory_monitor_summary.json
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc     21531 Jun  3 14:55 log.45006595._044185.job.log.tgz.1
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc        95 Jun  3 14:57 pilot_heartbeat.json
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc      8334 Jun  3 14:57 heartbeat.json
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc        22 Jun  3 14:58 wrapper_checkpoint.txt
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc      4475 Jun  3 14:58 pilotlog.txt
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc     80781 Jun  3 14:58 log.45006595._044185.job.log.1
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc       188 Jun  3 14:58 output.list
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:58 runtime_log
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc    122880 Jun  3 14:58 result.tar.gz
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:58 boinc_mmap_file
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc      8484 Jun  3 14:58 runtime_log.err
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc       645 Jun  3 14:58 rSiMDmRwmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJxlKDmLHPjKm.diag
[2025-06-03 14:58:07] -rw-r--r--. 1 boinc boinc     21702 Jun  3 14:58 stderr.txt
[2025-06-03 14:58:07] No HITS result produced
[2025-06-03 14:58:07]  *** Contents of shared directory: ***
[2025-06-03 14:58:07] total 211164
[2025-06-03 14:58:07] -rw-r--r--. 2 boinc boinc 215572751 Jun  3 14:52 ATLAS.root_0
[2025-06-03 14:58:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:52 start_atlas.sh
[2025-06-03 14:58:07] -rw-r--r--. 2 boinc boinc    508878 Jun  3 14:52 input.tar.gz
[2025-06-03 14:58:07] -rw-------. 1 boinc boinc    122880 Jun  3 14:58 result.tar.gz
14:58:09 (3566741): run_atlas exited; CPU time 27.137722
14:58:09 (3566741): called boinc_finish(0)

</stderr_txt>
]]>

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