Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:37 (31799): wrapper (7.7.26015): starting
10:07:37 (31799): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:07:37] Arguments: --nthreads 8
[2025-06-04 10:07:37] Threads: 8
[2025-06-04 10:07:37] Checking for CVMFS
[2025-06-04 10:07:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:07:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:07:40] 2.11.2.0 5987 32935 93484 146772 3 69 24295148 25165825 3906 130560 0 17236387 99.790 18800462 2113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:07:40] CVMFS is ok
[2025-06-04 10:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:07:40] Checking for apptainer binary...
[2025-06-04 10:07:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:07:41] Running /usr/bin/apptainer --version
[2025-06-04 10:07:41] apptainer version 1.3.2-1.el7
[2025-06-04 10:07:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:09:43] cg-vwn288.simple-grid.lan
[2025-06-04 10:09:43] apptainer works
[2025-06-04 10:09:43] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:09:43] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:09:43] Starting ATLAS job with PandaID=6677919937
[2025-06-04 10:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:47:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:47:10] 2025-06-04 12:26:53,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:47:10] 2025-06-04 12:26:53,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:47:10] 2025-06-04 12:26:53,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:47:10] 2025-06-04 12:26:53,435 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:47:10] 2025-06-04 12:26:53,436 | INFO     | sum of square deviations: 4340323240.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,444 | INFO     | sum of deviations: 47529257211.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,445 | INFO     | mean x: 1749032591.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,445 | INFO     | mean y: 2450960.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,445 | INFO     | -- intersect: -19150551084.1659
[2025-06-04 14:47:10] 2025-06-04 12:26:53,445 | INFO     | intersect: -19150551084.1659
[2025-06-04 14:47:10] 2025-06-04 12:26:53,446 | INFO     | chi2: 8.972618753139809
[2025-06-04 14:47:10] 2025-06-04 12:26:53,446 | INFO     | sum of square deviations: 4075741535.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,448 | INFO     | sum of deviations: 79129782489.00002
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | mean x: 1749032438.5
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | mean y: 2468939.338983051
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | -- intersect: -33954678548.108425
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | intersect: -33954678548.108425
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | chi2: 7.487782910729959
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | current chi2=7.487782910729959 (change=16.548522602615403 %)
[2025-06-04 14:47:10] 2025-06-04 12:26:53,449 | INFO     | right removable region: 235
[2025-06-04 14:47:10] 2025-06-04 12:26:53,450 | INFO     | sum of square deviations: 4075741535.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,452 | INFO     | sum of deviations: -37669238896.499985
[2025-06-04 14:47:10] 2025-06-04 12:26:53,452 | INFO     | mean x: 1749032743.5
[2025-06-04 14:47:10] 2025-06-04 12:26:53,452 | INFO     | mean y: 2500038.877118644
[2025-06-04 14:47:10] 2025-06-04 12:26:53,453 | INFO     | -- intersect: 16167590903.18343
[2025-06-04 14:47:10] 2025-06-04 12:26:53,453 | INFO     | intersect: 16167590903.18343
[2025-06-04 14:47:10] 2025-06-04 12:26:53,453 | INFO     | chi2: 3.9028276248503895
[2025-06-04 14:47:10] 2025-06-04 12:26:53,453 | INFO     | current chi2=3.9028276248503895 (change=56.502914787450834 %)
[2025-06-04 14:47:10] 2025-06-04 12:26:53,454 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,456 | INFO     | sum of deviations: -88784968934.00002
[2025-06-04 14:47:10] 2025-06-04 12:26:53,456 | INFO     | mean x: 1749032896.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,456 | INFO     | mean y: 2530646.303030303
[2025-06-04 14:47:10] 2025-06-04 12:26:53,456 | INFO     | -- intersect: 40631069150.85756
[2025-06-04 14:47:10] 2025-06-04 12:26:53,456 | INFO     | intersect: 40631069150.85756
[2025-06-04 14:47:10] 2025-06-04 12:26:53,457 | INFO     | chi2: 1.9418468740008006
[2025-06-04 14:47:10] 2025-06-04 12:26:53,457 | INFO     | current chi2=1.9418468740008006 (change=50.24512838751778 %)
[2025-06-04 14:47:10] 2025-06-04 12:26:53,457 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 14:47:10] 2025-06-04 12:26:53,459 | INFO     | sum of deviations: -90877743422.5
[2025-06-04 14:47:10] 2025-06-04 12:26:53,460 | INFO     | mean x: 1749033048.5
[2025-06-04 14:47:10] 2025-06-04 12:26:53,460 | INFO     | mean y: 2531913.53539823
[2025-06-04 14:47:10] 2025-06-04 12:26:53,460 | INFO     | -- intersect: 44410439630.28987
[2025-06-04 14:47:10] 2025-06-04 12:26:53,460 | INFO     | intersect: 44410439630.28987
[2025-06-04 14:47:10] 2025-06-04 12:26:53,460 | INFO     | chi2: 1.8962629992108861
[2025-06-04 14:47:10] 2025-06-04 12:26:53,460 | INFO     | current chi2=1.8962629992108861 (change=2.3474495028538302 %)
[2025-06-04 14:47:10] 2025-06-04 12:26:53,461 | INFO     | left removable region: 30
[2025-06-04 14:47:10] 2025-06-04 12:26:53,461 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,463 | INFO     | sum of deviations: -37949355319.00001
[2025-06-04 14:47:10] 2025-06-04 12:26:53,463 | INFO     | mean x: 1749033323.0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,463 | INFO     | mean y: 2538434.156097561
[2025-06-04 14:47:10] 2025-06-04 12:26:53,463 | INFO     | -- intersect: 24849472843.60315
[2025-06-04 14:47:10] 2025-06-04 12:26:53,463 | INFO     | intersect: 24849472843.60315
[2025-06-04 14:47:10] 2025-06-04 12:26:53,463 | INFO     | chi2: 0.1974567097127909
[2025-06-04 14:47:10] 2025-06-04 12:26:53,464 | INFO     | -- intersect: 24849472843.60315
[2025-06-04 14:47:10] 2025-06-04 12:26:53,464 | INFO     | current memory leak: -14.21 B/s (using 205 data points, chi2=0.20)
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | ..............................
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . Timing measurements:
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . get job = 0 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . initial setup = 5 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . payload setup = 165 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . stage-in = 0 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . payload execution = 14787 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,465 | INFO     | . stage-out = 5 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,466 | INFO     | . log creation = 1 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,466 | INFO     | ..............................
[2025-06-04 14:47:10] 2025-06-04 12:26:53,645 | INFO     | 
[2025-06-04 14:47:10] 2025-06-04 12:26:53,646 | INFO     | job summary report
[2025-06-04 14:47:10] 2025-06-04 12:26:53,646 | INFO     | --------------------------------------------------
[2025-06-04 14:47:10] 2025-06-04 12:26:53,646 | INFO     | PanDA job id: 6677919937
[2025-06-04 14:47:10] 2025-06-04 12:26:53,646 | INFO     | task id: 45006595
[2025-06-04 14:47:10] 2025-06-04 12:26:53,646 | INFO     | errors: (none)
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | pilot state: finished 
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | transexitcode: 0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | exeerrorcode: 0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | exeerrordiag: 
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | exitcode: 0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | exitmsg: OK
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | cpuconsumptiontime: 52679 s
[2025-06-04 14:47:10] 2025-06-04 12:26:53,647 | INFO     | nevents: 400
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | neventsw: 0
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | pid: 16388
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | pgrp: 16388
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | corecount: 8
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | event service: False
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 87: 2405564, 91: 2405798, 98: 2406106, 1
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | --------------------------------------------------
[2025-06-04 14:47:10] 2025-06-04 12:26:53,648 | INFO     | 
[2025-06-04 14:47:10] 2025-06-04 12:26:53,649 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 14:47:10] 2025-06-04 12:26:54,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:47:10] 2025-06-04 12:26:54,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:47:10] 2025-06-04 12:26:54,206 | INFO     | job 6677919937 has completed (purged errors)
[2025-06-04 14:47:10] 2025-06-04 12:26:54,206 | INFO     | overall cleanup function is called
[2025-06-04 14:47:10] 2025-06-04 12:26:54,709 | INFO     | PID=7485 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 14:47:10] 2025-06-04 12:26:54,709 | INFO     | .. there are 9 such processes running
[2025-06-04 14:47:10] 2025-06-04 12:26:55,215 | INFO     | --- collectZombieJob: --- 10, [16388]
[2025-06-04 14:47:10] 2025-06-04 12:26:55,216 | INFO     | zombie collector waiting for pid 16388
[2025-06-04 14:47:10] 2025-06-04 12:26:55,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:47:10] 2025-06-04 12:26:55,216 | INFO     | collected zombie processes
[2025-06-04 14:47:10] 2025-06-04 12:26:55,216 | INFO     | will attempt to kill all subprocesses of pid=16388
[2025-06-04 14:47:10] 2025-06-04 12:26:55,334 | INFO     | process IDs to be killed: [16388] (in reverse order)
[2025-06-04 14:47:10] 2025-06-04 12:26:56,067 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:47:10] 2025-06-04 12:26:56,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:47:10] 2025-06-04 12:26:56,071 | INFO     | did not find any defunct processes belonging to 16388
[2025-06-04 14:47:10] 2025-06-04 12:26:56,075 | INFO     | did not find any defunct processes belonging to 16388
[2025-06-04 14:47:10] 2025-06-04 12:26:56,075 | INFO     | ready for new job
[2025-06-04 14:47:10] 2025-06-04 12:26:56,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:47:10] 2025-06-04 12:26:56,077 | INFO     | **************************************
[2025-06-04 14:47:10] 2025-06-04 12:26:56,078 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:47:10] 2025-06-04 12:26:56,078 | INFO     | **************************************
[2025-06-04 14:47:10] 2025-06-04 12:26:56,078 | INFO     | 
[2025-06-04 14:47:10] 2025-06-04 12:26:56,078 | INFO     | pilot is running in a VM
[2025-06-04 14:47:10] 2025-06-04 12:26:56,079 | INFO     | architecture information:
[2025-06-04 14:47:10] 2025-06-04 12:26:56,094 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:47:10] 2025-06-04 12:26:56,509 | INFO     | cat /etc/os-release:
[2025-06-04 14:47:10] NAME="CentOS Linux"
[2025-06-04 14:47:10] VERSION="7 (Core)"
[2025-06-04 14:47:10] ID="centos"
[2025-06-04 14:47:10] ID_LIKE="rhel fedora"
[2025-06-04 14:47:10] VERSION_ID="7"
[2025-06-04 14:47:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:47:10] ANSI_COLOR="0;31"
[2025-06-04 14:47:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:47:10] HOME_URL="https://www.centos.org/"
[2025-06-04 14:47:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:47:10] 
[2025-06-04 14:47:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:47:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:47:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:47:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:47:10] 
[2025-06-04 14:47:10] 2025-06-04 12:26:56,510 | INFO     | **************************************
[2025-06-04 14:47:10] 2025-06-04 12:26:57,014 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 14:47:10] 2025-06-04 12:26:57,269 | INFO     | sufficient remaining disk space (496359178240 B)
[2025-06-04 14:47:10] 2025-06-04 12:26:57,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:47:10] 2025-06-04 12:26:57,269 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:47:10] 2025-06-04 12:26:57,269 | INFO     | update_server=False
[2025-06-04 14:47:10] 2025-06-04 12:26:57,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:47:10] 2025-06-04 12:26:57,271 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:47:10] 2025-06-04 12:26:57,271 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:47:10] 2025-06-04 12:26:57,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:47:10] 2025-06-04 12:26:57,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:47:10] 2025-06-04 12:26:57,943 | INFO     | all payload control threads have been joined
[2025-06-04 14:47:10] 2025-06-04 12:26:57,966 | INFO     | all data control threads have been joined
[2025-06-04 14:47:10] 2025-06-04 12:26:58,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:47:10] 2025-06-04 12:26:58,107 | INFO     | aborting loop
[2025-06-04 14:47:10] 2025-06-04 12:26:58,277 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:58,437 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:58,484 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:58,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:47:10] 2025-06-04 12:26:58,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:47:10] 2025-06-04 12:26:58,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:58,687 | INFO     | all job control threads have been joined
[2025-06-04 14:47:10] 2025-06-04 12:26:58,950 | INFO     | [payload] control thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:58,972 | INFO     | [data] control thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,054 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,113 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,642 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,651 | INFO     | [job] validate thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,676 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,685 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,694 | INFO     | [job] control thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,721 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:26:59,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:47:10] 2025-06-04 12:27:00,642 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:27:03,930 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:47:10] 2025-06-04 12:27:05,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280827320128)>', '<ExcThread(monitor, started 140280376309504)>']
[2025-06-04 14:47:10] 2025-06-04 12:27:06,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:47:10] 2025-06-04 12:27:06,327 | INFO     | [monitor] control thread has ended
[2025-06-04 14:47:10] 2025-06-04 12:27:10,719 | INFO     | all workflow threads have been joined
[2025-06-04 14:47:10] 2025-06-04 12:27:10,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:47:10] 2025-06-04 12:27:10,719 | INFO     | traces error code: 0
[2025-06-04 14:47:10] 2025-06-04 12:27:10,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:47:10] 2025-06-04 12:27:11,047 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:47:10] 2025-06-04 12:27:11,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:47:10] 2025-06-04 12:27:11,132 [wrapper] pilotpid: 7485
[2025-06-04 14:47:10] 2025-06-04 12:27:11,232 [wrapper] Pilot exit status: 0
[2025-06-04 14:47:10] 2025-06-04 12:27:11,502 [wrapper] pandaids: 6677919937
[2025-06-04 14:47:10] 2025-06-04 12:27:12,456 [wrapper] cleanup supervisor_pilot 22517 7486
[2025-06-04 14:47:10] 2025-06-04 12:27:12,516 [wrapper] Test setup, not cleaning
[2025-06-04 14:47:10] 2025-06-04 12:27:12,615 [wrapper] apfmon messages muted
[2025-06-04 14:47:10] 2025-06-04 12:27:12,672 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:47:10] 2025-06-04 12:27:12,729 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:47:10]  *** Error codes and diagnostics ***
[2025-06-04 14:47:10]     "exeErrorCode": 0,
[2025-06-04 14:47:10]     "exeErrorDiag": "",
[2025-06-04 14:47:10]     "pilotErrorCode": 0,
[2025-06-04 14:47:10]     "pilotErrorDiag": "",
[2025-06-04 14:47:10]  *** Listing of results directory ***
[2025-06-04 14:47:10] total 402748
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:13 queuedata.json
[2025-06-04 14:47:10] -rwx------. 1 boinc boinc     37140 Jun  3 20:15 runpilot2-wrapper.sh
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:47:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:07 run_atlas
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:07 job.xml
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc      6391 Jun  4 10:07 init_data.xml
[2025-06-04 14:47:10] -rw-r--r--. 2 boinc boinc 215808596 Jun  4 10:07 EVNT.45006593._001679.pool.root.1
[2025-06-04 14:47:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:07 start_atlas.sh
[2025-06-04 14:47:10] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:07 shared
[2025-06-04 14:47:10] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:07 input.tar.gz
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:07 boinc_lockfile
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:09 pandaJob.out
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc    986745 Jun  4 10:12 agis_schedconf.cvmfs.json
[2025-06-04 14:47:10] drwx------. 4 boinc boinc      4096 Jun  4 10:12 pilot3
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc 189385976 Jun  4 14:23 HITS.45006595._041863.pool.root.1
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:24 boinc_task_state.xml
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc      1018 Jun  4 14:25 memory_monitor_summary.json
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc   1598969 Jun  4 14:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc    398424 Jun  4 14:25 log.45006595._041863.job.log.tgz.1
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc        95 Jun  4 14:26 pilot_heartbeat.json
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc      7697 Jun  4 14:26 heartbeat.json
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc      4539 Jun  4 14:27 pilotlog.txt
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc   1301949 Jun  4 14:27 log.45006595._041863.job.log.1
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc       357 Jun  4 14:27 output.list
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:27 runtime_log
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc   1720320 Jun  4 14:27 result.tar.gz
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:27 runtime_log.err
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc       657 Jun  4 14:27 dy5NDmJLlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiclKDmaKsRWn.diag
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:47 boinc_mmap_file
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:47 wrapper_checkpoint.txt
[2025-06-04 14:47:10] -rw-r--r--. 1 boinc boinc     20606 Jun  4 14:47 stderr.txt
[2025-06-04 14:47:10] HITS file was successfully produced:
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc 189385976 Jun  4 14:23 shared/HITS.pool.root.1
[2025-06-04 14:47:10]  *** Contents of shared directory: ***
[2025-06-04 14:47:10] total 397896
[2025-06-04 14:47:10] -rw-r--r--. 2 boinc boinc 215808596 Jun  4 10:07 ATLAS.root_0
[2025-06-04 14:47:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:07 start_atlas.sh
[2025-06-04 14:47:10] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:07 input.tar.gz
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc 189385976 Jun  4 14:23 HITS.pool.root.1
[2025-06-04 14:47:10] -rw-------. 1 boinc boinc   1720320 Jun  4 14:27 result.tar.gz
14:47:12 (31799): run_atlas exited; CPU time 52893.995864
14:47:12 (31799): called boinc_finish(0)

</stderr_txt>
]]>

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