Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:48:31 (5070): wrapper (7.7.26015): starting
06:48:31 (5070): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:48:31] Arguments: --nthreads 8
[2025-06-04 06:48:31] Threads: 8
[2025-06-04 06:48:31] Checking for CVMFS
[2025-06-04 06:48:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:48:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:48:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:48:34] 2.11.2.0 18352 32930 93256 146767 2 16 24149004 25165825 3519 130560 0 17629605 99.789 19841635 4366 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 06:48:34] CVMFS is ok
[2025-06-04 06:48:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:48:34] Checking for apptainer binary...
[2025-06-04 06:48:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:48:34] Running /usr/bin/apptainer --version
[2025-06-04 06:48:34] apptainer version 1.3.2-1.el7
[2025-06-04 06:48:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:40:47] cg-vwn313.simple-grid.lan
[2025-06-04 07:40:47] apptainer works
[2025-06-04 07:40:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:40:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:40:47] Starting ATLAS job with PandaID=6677920460
[2025-06-04 07:40:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:38:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:38:41] 2025-06-04 09:38:01,260 | INFO     | mean x: 1749023368.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,261 | INFO     | mean y: 2505940.0805687206
[2025-06-04 11:38:41] 2025-06-04 09:38:01,261 | INFO     | -- intersect: 3857680175.2446938
[2025-06-04 11:38:41] 2025-06-04 09:38:01,261 | INFO     | intersect: 3857680175.2446938
[2025-06-04 11:38:41] 2025-06-04 09:38:01,261 | INFO     | chi2: 0.07053803656605873
[2025-06-04 11:38:41] 2025-06-04 09:38:01,261 | INFO     | current chi2=0.07053803656605873 (change=82.10575993218879 %)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,262 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,263 | INFO     | sum of deviations: -171203393.0000003
[2025-06-04 11:38:41] 2025-06-04 09:38:01,264 | INFO     | mean x: 1749023520.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,264 | INFO     | mean y: 2501216.3883495145
[2025-06-04 11:38:41] 2025-06-04 09:38:01,264 | INFO     | -- intersect: 112969642.49624772
[2025-06-04 11:38:41] 2025-06-04 09:38:01,264 | INFO     | intersect: 112969642.49624772
[2025-06-04 11:38:41] 2025-06-04 09:38:01,264 | INFO     | chi2: 0.04186306646002667
[2025-06-04 11:38:41] 2025-06-04 09:38:01,264 | INFO     | current chi2=0.04186306646002667 (change=40.651783777930945 %)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,265 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,266 | INFO     | sum of deviations: 5659326362.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,267 | INFO     | mean x: 1749023673.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,267 | INFO     | mean y: 2496627.199004975
[2025-06-04 11:38:41] 2025-06-04 09:38:01,267 | INFO     | -- intersect: -3928517284.1041045
[2025-06-04 11:38:41] 2025-06-04 09:38:01,267 | INFO     | intersect: -3928517284.1041045
[2025-06-04 11:38:41] 2025-06-04 09:38:01,267 | INFO     | chi2: 0.0007674102027337357
[2025-06-04 11:38:41] 2025-06-04 09:38:01,268 | INFO     | current chi2=0.0007674102027337357 (change=98.16685621091206 %)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,268 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,269 | INFO     | sum of deviations: 4585693025.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,270 | INFO     | mean x: 1749023825.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,270 | INFO     | mean y: 2497519.6071428573
[2025-06-04 11:38:41] 2025-06-04 09:38:01,270 | INFO     | -- intersect: -3432808035.0565324
[2025-06-04 11:38:41] 2025-06-04 09:38:01,270 | INFO     | intersect: -3432808035.0565324
[2025-06-04 11:38:41] 2025-06-04 09:38:01,271 | INFO     | chi2: 0.00033800873384123923
[2025-06-04 11:38:41] 2025-06-04 09:38:01,271 | INFO     | current chi2=0.00033800873384123923 (change=55.954620796393506 %)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,272 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,273 | INFO     | sum of deviations: 3905585390.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,273 | INFO     | mean x: 1749023978.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,273 | INFO     | mean y: 2498113.602094241
[2025-06-04 11:38:41] 2025-06-04 09:38:01,273 | INFO     | -- intersect: -3159162725.460405
[2025-06-04 11:38:41] 2025-06-04 09:38:01,273 | INFO     | intersect: -3159162725.460405
[2025-06-04 11:38:41] 2025-06-04 09:38:01,274 | INFO     | chi2: 0.00020745923070778277
[2025-06-04 11:38:41] 2025-06-04 09:38:01,274 | INFO     | current chi2=0.00020745923070778277 (change=38.62311534079318 %)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,274 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | sum of deviations: 3475789058.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | mean x: 1749024130.5
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | mean y: 2498509.0376344086
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | -- intersect: -3044305440.6615977
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | intersect: -3044305440.6615977
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | chi2: 0.00018100999246807435
[2025-06-04 11:38:41] 2025-06-04 09:38:01,276 | INFO     | current chi2=0.00018100999246807435 (change=12.749125767733888 %)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,277 | INFO     | left removable region: 70
[2025-06-04 11:38:41] 2025-06-04 09:38:01,277 | INFO     | sum of square deviations: 945282840.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,278 | INFO     | sum of deviations: 1137056714.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,278 | INFO     | mean x: 1749025015.0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,278 | INFO     | mean y: 2500898.8206896554
[2025-06-04 11:38:41] 2025-06-04 09:38:01,278 | INFO     | -- intersect: -2101356858.990402
[2025-06-04 11:38:41] 2025-06-04 09:38:01,278 | INFO     | intersect: -2101356858.990402
[2025-06-04 11:38:41] 2025-06-04 09:38:01,278 | INFO     | chi2: 5.1001521403561896e-05
[2025-06-04 11:38:41] 2025-06-04 09:38:01,279 | INFO     | -- intersect: -2101356858.990402
[2025-06-04 11:38:41] 2025-06-04 09:38:01,279 | INFO     | current memory leak: 1.20 B/s (using 145 data points, chi2=0.00)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | ..............................
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . Timing measurements:
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . get job = 0 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . initial setup = 11 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . payload setup = 162 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . stage-in = 0 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . payload execution = 13625 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . stage-out = 2 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | . log creation = 0 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,280 | INFO     | ..............................
[2025-06-04 11:38:41] 2025-06-04 09:38:01,403 | INFO     | 
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | job summary report
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | --------------------------------------------------
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | PanDA job id: 6677920460
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | task id: 45006595
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | errors: (none)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | pilot state: finished 
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | transexitcode: 0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | exeerrorcode: 0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,404 | INFO     | exeerrordiag: 
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | exitcode: 0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | exitmsg: OK
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | cpuconsumptiontime: 50436 s
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | nevents: 400
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | neventsw: 0
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | pid: 16505
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | pgrp: 16505
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | corecount: 8
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | event service: False
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 22: 2405241, 33: 2405269, 44: 2405325, 55: 2405481, 65: 2405509, 76: 2405537, 87: 2405593, 93: 2405827, 98: 2406135, 1
[2025-06-04 11:38:41] 2025-06-04 09:38:01,405 | INFO     | --------------------------------------------------
[2025-06-04 11:38:41] 2025-06-04 09:38:01,406 | INFO     | 
[2025-06-04 11:38:41] 2025-06-04 09:38:01,406 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:38:41] 2025-06-04 09:38:01,583 | INFO     | job 6677920460 has completed (purged errors)
[2025-06-04 11:38:41] 2025-06-04 09:38:01,583 | INFO     | overall cleanup function is called
[2025-06-04 11:38:41] 2025-06-04 09:38:02,600 | INFO     | --- collectZombieJob: --- 10, [16505]
[2025-06-04 11:38:41] 2025-06-04 09:38:02,601 | INFO     | zombie collector waiting for pid 16505
[2025-06-04 11:38:41] 2025-06-04 09:38:02,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:38:41] 2025-06-04 09:38:02,601 | INFO     | collected zombie processes
[2025-06-04 11:38:41] 2025-06-04 09:38:02,601 | INFO     | will attempt to kill all subprocesses of pid=16505
[2025-06-04 11:38:41] 2025-06-04 09:38:02,732 | INFO     | process IDs to be killed: [16505] (in reverse order)
[2025-06-04 11:38:41] 2025-06-04 09:38:02,853 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:38:41] 2025-06-04 09:38:02,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:38:41] 2025-06-04 09:38:02,857 | INFO     | did not find any defunct processes belonging to 16505
[2025-06-04 11:38:41] 2025-06-04 09:38:02,861 | INFO     | did not find any defunct processes belonging to 16505
[2025-06-04 11:38:41] 2025-06-04 09:38:02,861 | INFO     | ready for new job
[2025-06-04 11:38:41] 2025-06-04 09:38:02,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:38:41] 2025-06-04 09:38:02,863 | INFO     | **************************************
[2025-06-04 11:38:41] 2025-06-04 09:38:02,864 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:38:41] 2025-06-04 09:38:02,864 | INFO     | **************************************
[2025-06-04 11:38:41] 2025-06-04 09:38:02,864 | INFO     | 
[2025-06-04 11:38:41] 2025-06-04 09:38:02,865 | INFO     | pilot is running in a VM
[2025-06-04 11:38:41] 2025-06-04 09:38:02,865 | INFO     | architecture information:
[2025-06-04 11:38:41] 2025-06-04 09:38:02,872 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:38:41] 2025-06-04 09:38:03,069 | INFO     | cat /etc/os-release:
[2025-06-04 11:38:41] NAME="CentOS Linux"
[2025-06-04 11:38:41] VERSION="7 (Core)"
[2025-06-04 11:38:41] ID="centos"
[2025-06-04 11:38:41] ID_LIKE="rhel fedora"
[2025-06-04 11:38:41] VERSION_ID="7"
[2025-06-04 11:38:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:38:41] ANSI_COLOR="0;31"
[2025-06-04 11:38:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:38:41] HOME_URL="https://www.centos.org/"
[2025-06-04 11:38:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:38:41] 
[2025-06-04 11:38:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:38:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:38:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:38:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:38:41] 
[2025-06-04 11:38:41] 2025-06-04 09:38:03,069 | INFO     | **************************************
[2025-06-04 11:38:41] 2025-06-04 09:38:03,572 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 11:38:41] 2025-06-04 09:38:03,971 | INFO     | sufficient remaining disk space (496835231744 B)
[2025-06-04 11:38:41] 2025-06-04 09:38:03,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:38:41] 2025-06-04 09:38:03,971 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:38:41] 2025-06-04 09:38:03,972 | INFO     | update_server=False
[2025-06-04 11:38:41] 2025-06-04 09:38:03,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:38:41] 2025-06-04 09:38:04,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:38:41] 2025-06-04 09:38:04,119 | INFO     | aborting loop
[2025-06-04 11:38:41] 2025-06-04 09:38:04,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:38:41] 2025-06-04 09:38:04,653 | INFO     | all job control threads have been joined
[2025-06-04 11:38:41] 2025-06-04 09:38:04,826 | INFO     | all payload control threads have been joined
[2025-06-04 11:38:41] 2025-06-04 09:38:04,896 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:38:41] 2025-06-04 09:38:04,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:38:41] 2025-06-04 09:38:04,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:38:41] 2025-06-04 09:38:04,979 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,029 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,076 | INFO     | all data control threads have been joined
[2025-06-04 11:38:41] 2025-06-04 09:38:05,086 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,124 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,594 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,660 | INFO     | [job] control thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,801 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:05,832 | INFO     | [payload] control thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:06,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:38:41] 2025-06-04 09:38:06,081 | INFO     | [data] control thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:06,111 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:06,341 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:06,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:38:41] 2025-06-04 09:38:06,473 | INFO     | [job] validate thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:06,617 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:07,427 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:10,071 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:14,174 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:38:41] 2025-06-04 09:38:15,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:38:41] 2025-06-04 09:38:16,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619001452352)>', '<ExcThread(monitor, started 140617824855808)>']
[2025-06-04 11:38:41] 2025-06-04 09:38:16,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:38:41] 2025-06-04 09:38:16,969 | INFO     | [monitor] control thread has ended
[2025-06-04 11:38:41] 2025-06-04 09:38:21,417 | INFO     | all workflow threads have been joined
[2025-06-04 11:38:41] 2025-06-04 09:38:21,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:38:41] 2025-06-04 09:38:21,418 | INFO     | traces error code: 0
[2025-06-04 11:38:41] 2025-06-04 09:38:21,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:38:41] 2025-06-04 09:38:21,730 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:38:41] 2025-06-04 09:38:21,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:38:41] 2025-06-04 09:38:21,854 [wrapper] pilotpid: 7898
[2025-06-04 11:38:41] 2025-06-04 09:38:21,912 [wrapper] Pilot exit status: 0
[2025-06-04 11:38:41] 2025-06-04 09:38:22,416 [wrapper] pandaids: 6677920460
[2025-06-04 11:38:41] 2025-06-04 09:38:23,139 [wrapper] cleanup supervisor_pilot 14326 7899
[2025-06-04 11:38:41] 2025-06-04 09:38:23,239 [wrapper] Test setup, not cleaning
[2025-06-04 11:38:41] 2025-06-04 09:38:23,348 [wrapper] apfmon messages muted
[2025-06-04 11:38:41] 2025-06-04 09:38:23,430 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:38:41] 2025-06-04 09:38:23,435 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:38:41]  *** Error codes and diagnostics ***
[2025-06-04 11:38:41]     "exeErrorCode": 0,
[2025-06-04 11:38:41]     "exeErrorDiag": "",
[2025-06-04 11:38:41]     "pilotErrorCode": 0,
[2025-06-04 11:38:41]     "pilotErrorDiag": "",
[2025-06-04 11:38:41]  *** Listing of results directory ***
[2025-06-04 11:38:41] total 389600
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:24 queuedata.json
[2025-06-04 11:38:41] -rwx------. 1 boinc boinc     37140 Jun  3 20:25 runpilot2-wrapper.sh
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:38:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:48 run_atlas
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:48 job.xml
[2025-06-04 11:38:41] -rw-r--r--. 2 boinc boinc 213951737 Jun  4 06:48 EVNT.45006593._001685.pool.root.1
[2025-06-04 11:38:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:48 start_atlas.sh
[2025-06-04 11:38:41] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:48 shared
[2025-06-04 11:38:41] -rw-r--r--. 2 boinc boinc    508882 Jun  4 06:48 input.tar.gz
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc      6392 Jun  4 06:48 init_data.xml
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:48 boinc_lockfile
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:40 pandaJob.out
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc    986745 Jun  4 07:43 agis_schedconf.cvmfs.json
[2025-06-04 11:38:41] drwx------. 4 boinc boinc      4096 Jun  4 07:44 pilot3
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc 177989042 Jun  4 11:36 HITS.45006595._042012.pool.root.1
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc       530 Jun  4 11:36 boinc_task_state.xml
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc      1016 Jun  4 11:37 memory_monitor_summary.json
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc   1603667 Jun  4 11:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc    388821 Jun  4 11:37 log.45006595._042012.job.log.tgz.1
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc        95 Jun  4 11:37 pilot_heartbeat.json
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc      7690 Jun  4 11:38 heartbeat.json
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc      4489 Jun  4 11:38 pilotlog.txt
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc   1204432 Jun  4 11:38 log.45006595._042012.job.log.1
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc       357 Jun  4 11:38 output.list
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:38 runtime_log
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc   1607680 Jun  4 11:38 result.tar.gz
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc       657 Jun  4 11:38 uEjLDmaVlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6dlKDmozgDTn.diag
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc      8673 Jun  4 11:38 runtime_log.err
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:38 boinc_mmap_file
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:38 wrapper_checkpoint.txt
[2025-06-04 11:38:41] -rw-r--r--. 1 boinc boinc     20482 Jun  4 11:38 stderr.txt
[2025-06-04 11:38:41] HITS file was successfully produced:
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc 177989042 Jun  4 11:36 shared/HITS.pool.root.1
[2025-06-04 11:38:41]  *** Contents of shared directory: ***
[2025-06-04 11:38:41] total 384848
[2025-06-04 11:38:41] -rw-r--r--. 2 boinc boinc 213951737 Jun  4 06:48 ATLAS.root_0
[2025-06-04 11:38:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:48 start_atlas.sh
[2025-06-04 11:38:41] -rw-r--r--. 2 boinc boinc    508882 Jun  4 06:48 input.tar.gz
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc 177989042 Jun  4 11:36 HITS.pool.root.1
[2025-06-04 11:38:41] -rw-------. 1 boinc boinc   1607680 Jun  4 11:38 result.tar.gz
11:38:43 (5070): run_atlas exited; CPU time 50627.375887
11:38:43 (5070): called boinc_finish(0)

</stderr_txt>
]]>

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