Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:47:28 (1532363): wrapper (7.7.26015): starting
23:47:28 (1532363): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 23:47:28] Arguments: --nthreads 12
[2025-06-05 23:47:28] Threads: 12
[2025-06-05 23:47:28] Checking for CVMFS
[2025-06-05 23:47:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 23:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 23:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 23:47:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 23:47:31] 2.12.7.0 359462 3739 63516 146836 1 56 2597753 4096001 912 130560 0 3157497 99.991 872265 126 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 23:47:31] CVMFS is ok
[2025-06-05 23:47:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 23:47:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 23:47:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 23:47:31] Further information can be found at the LHC@home message board.
[2025-06-05 23:47:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:47:31] Checking for apptainer binary...
[2025-06-05 23:47:31] apptainer is not installed, using version from CVMFS
[2025-06-05 23:47:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:47:32] ggg3250
[2025-06-05 23:47:32] apptainer works
[2025-06-05 23:47:32] Set ATHENA_PROC_NUMBER=12
[2025-06-05 23:47:32] Set ATHENA_CORE_NUMBER=12
[2025-06-05 23:47:32] Starting ATLAS job with PandaID=6677784112
[2025-06-05 23:47:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:36:41]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:36:41] 2025-06-06 03:36:27,579 | INFO     | extracted standard info from prmon json
[2025-06-06 03:36:41] 2025-06-06 03:36:27,579 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:36:41] 2025-06-06 03:36:27,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:36:41] 2025-06-06 03:36:27,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:36:41] 2025-06-06 03:36:27,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:36:41] 2025-06-06 03:36:27,581 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:36:41] 2025-06-06 03:36:27,582 | INFO     | sum of square deviations: 3392567795.5
[2025-06-06 03:36:41] 2025-06-06 03:36:27,602 | INFO     | sum of deviations: 45963761019.000015
[2025-06-06 03:36:41] 2025-06-06 03:36:27,603 | INFO     | mean x: 1749174180.5
[2025-06-06 03:36:41] 2025-06-06 03:36:27,603 | INFO     | mean y: 2594674.918918919
[2025-06-06 03:36:41] 2025-06-06 03:36:27,603 | INFO     | -- intersect: -23695862912.207344
[2025-06-06 03:36:41] 2025-06-06 03:36:27,603 | INFO     | intersect: -23695862912.207344
[2025-06-06 03:36:41] 2025-06-06 03:36:27,603 | INFO     | chi2: 4.484607442327021
[2025-06-06 03:36:41] 2025-06-06 03:36:27,603 | INFO     | sum of square deviations: 3168461268.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | sum of deviations: 75441548639.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | mean x: 1749174028.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | mean y: 2614447.815668203
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | -- intersect: -41645487375.03974
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | intersect: -41645487375.03974
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | chi2: 2.957684576268795
[2025-06-06 03:36:41] 2025-06-06 03:36:27,604 | INFO     | current chi2=2.957684576268795 (change=34.048083041710335 %)
[2025-06-06 03:36:41] 2025-06-06 03:36:27,605 | INFO     | sum of square deviations: 2954447953.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,605 | INFO     | sum of deviations: 73302130348.00003
[2025-06-06 03:36:41] 2025-06-06 03:36:27,605 | INFO     | mean x: 1749173875.5
[2025-06-06 03:36:41] 2025-06-06 03:36:27,605 | INFO     | mean y: 2612923.066037736
[2025-06-06 03:36:41] 2025-06-06 03:36:27,605 | INFO     | -- intersect: -43395738803.86905
[2025-06-06 03:36:41] 2025-06-06 03:36:27,605 | INFO     | intersect: -43395738803.86905
[2025-06-06 03:36:41] 2025-06-06 03:36:27,606 | INFO     | chi2: 2.9597777690827987
[2025-06-06 03:36:41] 2025-06-06 03:36:27,606 | INFO     | current chi2=2.9597777690827987 (change=-0.07077133345450914 %)
[2025-06-06 03:36:41] 2025-06-06 03:36:27,606 | INFO     | right removable region: 211
[2025-06-06 03:36:41] 2025-06-06 03:36:27,606 | INFO     | sum of square deviations: 3168461268.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | sum of deviations: -14775936243.000002
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | mean x: 1749174333.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | mean y: 2635857.4884792627
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | -- intersect: 8159809398.894716
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | intersect: 8159809398.894716
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | chi2: 1.819385621829253
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | current chi2=1.819385621829253 (change=59.43043744124924 %)
[2025-06-06 03:36:41] 2025-06-06 03:36:27,625 | INFO     | sum of square deviations: 2954447953.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | sum of deviations: -27941230773.5
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | mean x: 1749174485.5
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | mean y: 2645209.419811321
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | -- intersect: 16545190124.738424
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | intersect: 16545190124.738424
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | chi2: 1.6920799100262633
[2025-06-06 03:36:41] 2025-06-06 03:36:27,626 | INFO     | current chi2=1.6920799100262633 (change=6.99718137131333 %)
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | left removable region: 20
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | sum of square deviations: 2160561440.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | sum of deviations: 1532289866.0000005
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | mean x: 1749174455.0
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | mean y: 2666465.821989529
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | -- intersect: -1237864000.7694044
[2025-06-06 03:36:41] 2025-06-06 03:36:27,627 | INFO     | intersect: -1237864000.7694044
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | chi2: 0.056287674311219546
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | -- intersect: -1237864000.7694044
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | current memory leak: 0.71 B/s (using 191 data points, chi2=0.06)
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | ..............................
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . Timing measurements:
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . get job = 0 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . initial setup = 7 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . payload setup = 55 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . stage-in = 0 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . payload execution = 13512 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . stage-out = 3 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | . log creation = 0 s
[2025-06-06 03:36:41] 2025-06-06 03:36:27,628 | INFO     | ..............................
[2025-06-06 03:36:41] 2025-06-06 03:36:28,290 | INFO     | 
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | job summary report
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | --------------------------------------------------
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | PanDA job id: 6677784112
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | task id: 45006595
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | errors: (none)
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | pilot state: finished 
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | transexitcode: 0
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | exeerrorcode: 0
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | exeerrordiag: 
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | exitcode: 0
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | exitmsg: OK
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | cpuconsumptiontime: 20458 s
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | nevents: 400
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | neventsw: 0
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | pid: 1542365
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | pgrp: 1542365
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | corecount: 12
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | event service: False
[2025-06-06 03:36:41] 2025-06-06 03:36:28,291 | INFO     | sizes: {0: 2397194, 1: 2397393, 12: 2397393, 23: 2397421, 25: 2397655, 34: 2397683, 13571: 2427553, 13572: 2427552, 13575: 2436595, 13577: 2436651, 13625: 2436821}
[2025-06-06 03:36:41] 2025-06-06 03:36:28,292 | INFO     | --------------------------------------------------
[2025-06-06 03:36:41] 2025-06-06 03:36:28,292 | INFO     | 
[2025-06-06 03:36:41] 2025-06-06 03:36:28,292 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | job 6677784112 has completed (purged errors)
[2025-06-06 03:36:41] 2025-06-06 03:36:28,356 | INFO     | overall cleanup function is called
[2025-06-06 03:36:41] 2025-06-06 03:36:29,362 | INFO     | --- collectZombieJob: --- 10, [1542365]
[2025-06-06 03:36:41] 2025-06-06 03:36:29,363 | INFO     | zombie collector waiting for pid 1542365
[2025-06-06 03:36:41] 2025-06-06 03:36:29,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:36:41] 2025-06-06 03:36:29,363 | INFO     | collected zombie processes
[2025-06-06 03:36:41] 2025-06-06 03:36:29,363 | INFO     | will attempt to kill all subprocesses of pid=1542365
[2025-06-06 03:36:41] 2025-06-06 03:36:29,558 | INFO     | process IDs to be killed: [1542365] (in reverse order)
[2025-06-06 03:36:41] 2025-06-06 03:36:29,731 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:36:41] 2025-06-06 03:36:29,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:36:41] 2025-06-06 03:36:29,732 | INFO     | did not find any defunct processes belonging to 1542365
[2025-06-06 03:36:41] 2025-06-06 03:36:29,733 | INFO     | did not find any defunct processes belonging to 1542365
[2025-06-06 03:36:41] 2025-06-06 03:36:29,733 | INFO     | ready for new job
[2025-06-06 03:36:41] 2025-06-06 03:36:29,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:36:41] 2025-06-06 03:36:29,734 | INFO     | **************************************
[2025-06-06 03:36:41] 2025-06-06 03:36:29,734 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:36:41] 2025-06-06 03:36:29,734 | INFO     | **************************************
[2025-06-06 03:36:41] 2025-06-06 03:36:29,734 | INFO     | 
[2025-06-06 03:36:41] 2025-06-06 03:36:29,771 | INFO     | architecture information:
[2025-06-06 03:36:41] 2025-06-06 03:36:29,771 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:36:41] 2025-06-06 03:36:29,875 | INFO     | cat /etc/os-release:
[2025-06-06 03:36:41] NAME="CentOS Linux"
[2025-06-06 03:36:41] VERSION="7 (Core)"
[2025-06-06 03:36:41] ID="centos"
[2025-06-06 03:36:41] ID_LIKE="rhel fedora"
[2025-06-06 03:36:41] VERSION_ID="7"
[2025-06-06 03:36:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:36:41] ANSI_COLOR="0;31"
[2025-06-06 03:36:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:36:41] HOME_URL="https://www.centos.org/"
[2025-06-06 03:36:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:36:41] 
[2025-06-06 03:36:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:36:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:36:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:36:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:36:41] 
[2025-06-06 03:36:41] 2025-06-06 03:36:29,875 | INFO     | **************************************
[2025-06-06 03:36:41] 2025-06-06 03:36:30,379 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | INFO     | sufficient remaining disk space (188147040256 B)
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | INFO     | update_server=False
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:36:41] 2025-06-06 03:36:30,427 | INFO     | aborting loop
[2025-06-06 03:36:41] 2025-06-06 03:36:30,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:36:41] 2025-06-06 03:36:30,710 | INFO     | PID=1535946 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 03:36:41] 2025-06-06 03:36:30,710 | INFO     | .. there are 2 such processes running
[2025-06-06 03:36:41] 2025-06-06 03:36:30,710 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:36:41] 2025-06-06 03:36:30,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:36:41] 2025-06-06 03:36:30,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:36:41] 2025-06-06 03:36:31,274 | INFO     | all data control threads have been joined
[2025-06-06 03:36:41] 2025-06-06 03:36:31,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:36:41] 2025-06-06 03:36:31,431 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:31,431 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:31,606 | INFO     | all payload control threads have been joined
[2025-06-06 03:36:41] 2025-06-06 03:36:31,775 | INFO     | [job] validate thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:31,775 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,022 | INFO     | all job control threads have been joined
[2025-06-06 03:36:41] 2025-06-06 03:36:32,030 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,038 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,134 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,278 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,279 | INFO     | [data] control thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,610 | INFO     | [payload] control thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:32,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:36:41] 2025-06-06 03:36:33,026 | INFO     | [job] control thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:33,322 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:33,858 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:34,494 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:36:41] 2025-06-06 03:36:35,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647337203520)>', '<ExcThread(monitor, started 140647042356992)>']
[2025-06-06 03:36:41] 2025-06-06 03:36:35,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:36:41] 2025-06-06 03:36:35,747 | INFO     | [monitor] control thread has ended
[2025-06-06 03:36:41] 2025-06-06 03:36:40,762 | INFO     | all workflow threads have been joined
[2025-06-06 03:36:41] 2025-06-06 03:36:40,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:36:41] 2025-06-06 03:36:40,763 | INFO     | traces error code: 0
[2025-06-06 03:36:41] 2025-06-06 03:36:40,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:36:41] 2025-06-06 03:36:41,144 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:36:41] 2025-06-06 03:36:41,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:36:41] 2025-06-06 03:36:41,199 [wrapper] pilotpid: 1535946
[2025-06-06 03:36:41] 2025-06-06 03:36:41,223 [wrapper] Pilot exit status: 0
[2025-06-06 03:36:41] 2025-06-06 03:36:41,306 [wrapper] pandaids: 6677784112
[2025-06-06 03:36:41] 2025-06-06 03:36:41,367 [wrapper] cleanup supervisor_pilot 1598726 1535947
[2025-06-06 03:36:41] 2025-06-06 03:36:41,399 [wrapper] Test setup, not cleaning
[2025-06-06 03:36:41] 2025-06-06 03:36:41,427 [wrapper] apfmon messages muted
[2025-06-06 03:36:41] 2025-06-06 03:36:41,455 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:36:41] 2025-06-06 03:36:41,487 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:36:41]  *** Error codes and diagnostics ***
[2025-06-06 03:36:41]     "exeErrorCode": 0,
[2025-06-06 03:36:41]     "exeErrorDiag": "",
[2025-06-06 03:36:41]     "pilotErrorCode": 0,
[2025-06-06 03:36:41]     "pilotErrorDiag": "",
[2025-06-06 03:36:41]  *** Listing of results directory ***
[2025-06-06 03:36:41] total 381480
[2025-06-06 03:36:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:42 pilot3.tar.gz
[2025-06-06 03:36:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:50 queuedata.json
[2025-06-06 03:36:41] -rwx------ 1 boinc boinc     37140 Jun  3 16:50 runpilot2-wrapper.sh
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc       100 Jun  5 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:36:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 23:47 run_atlas
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc       105 Jun  5 23:47 job.xml
[2025-06-06 03:36:41] drwxrwx--x 2 boinc boinc      4096 Jun  5 23:47 shared
[2025-06-06 03:36:41] -rw-r--r-- 2 boinc boinc    508883 Jun  5 23:47 input.tar.gz
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc      9361 Jun  5 23:47 init_data.xml
[2025-06-06 03:36:41] -rw-r--r-- 2 boinc boinc 213644932 Jun  5 23:47 EVNT.45006593._001572.pool.root.1
[2025-06-06 03:36:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 23:47 start_atlas.sh
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc         0 Jun  5 23:47 boinc_lockfile
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 23:47 pandaJob.out
[2025-06-06 03:36:41] -rw------- 1 boinc boinc    987721 Jun  5 23:48 agis_schedconf.cvmfs.json
[2025-06-06 03:36:41] drwx------ 4 boinc boinc      4096 Jun  5 23:48 pilot3
[2025-06-06 03:36:41] -rw------- 1 boinc boinc 169688003 Jun  6 03:34 HITS.45006595._039205.pool.root.1
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc       530 Jun  6 03:34 boinc_task_state.xml
[2025-06-06 03:36:41] -rw------- 1 boinc boinc      1033 Jun  6 03:35 memory_monitor_summary.json
[2025-06-06 03:36:41] -rw------- 1 boinc boinc   1598969 Jun  6 03:35 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:36:41] -rw------- 1 boinc boinc    453487 Jun  6 03:35 log.45006595._039205.job.log.tgz.1
[2025-06-06 03:36:41] -rw------- 1 boinc boinc        95 Jun  6 03:36 pilot_heartbeat.json
[2025-06-06 03:36:41] -rw------- 1 boinc boinc      7667 Jun  6 03:36 heartbeat.json
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc        28 Jun  6 03:36 wrapper_checkpoint.txt
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 03:36 boinc_mmap_file
[2025-06-06 03:36:41] -rw------- 1 boinc boinc      4771 Jun  6 03:36 pilotlog.txt
[2025-06-06 03:36:41] -rw------- 1 boinc boinc   1277915 Jun  6 03:36 log.45006595._039205.job.log.1
[2025-06-06 03:36:41] -rw------- 1 boinc boinc       357 Jun  6 03:36 output.list
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc       620 Jun  6 03:36 runtime_log
[2025-06-06 03:36:41] -rw------- 1 boinc boinc   1751040 Jun  6 03:36 result.tar.gz
[2025-06-06 03:36:41] -rw------- 1 boinc boinc       652 Jun  6 03:36 UPLNDmK1jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm19kKDmzRSlOo.diag
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc      8959 Jun  6 03:36 runtime_log.err
[2025-06-06 03:36:41] -rw-rw-r-- 1 boinc boinc     21070 Jun  6 03:36 stderr.txt
[2025-06-06 03:36:42] HITS file was successfully produced:
[2025-06-06 03:36:42] -rw------- 1 boinc boinc 169688003 Jun  6 03:34 shared/HITS.pool.root.1
[2025-06-06 03:36:42]  *** Contents of shared directory: ***
[2025-06-06 03:36:42] total 376588
[2025-06-06 03:36:42] -rw-r--r-- 2 boinc boinc    508883 Jun  5 23:47 input.tar.gz
[2025-06-06 03:36:42] -rw-r--r-- 2 boinc boinc 213644932 Jun  5 23:47 ATLAS.root_0
[2025-06-06 03:36:42] -rw-r--r-- 2 boinc boinc     15093 Jun  5 23:47 start_atlas.sh
[2025-06-06 03:36:42] -rw------- 1 boinc boinc 169688003 Jun  6 03:34 HITS.pool.root.1
[2025-06-06 03:36:42] -rw------- 1 boinc boinc   1751040 Jun  6 03:36 result.tar.gz
03:36:43 (1532363): run_atlas exited; CPU time 20512.088979
03:36:43 (1532363): called boinc_finish(0)

</stderr_txt>
]]>

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