Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:33:16 (2474642): wrapper (7.7.26015): starting
12:33:16 (2474642): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 12:33:16] Arguments: --nthreads 4
[2025-06-05 12:33:16] Threads: 4
[2025-06-05 12:33:16] Checking for CVMFS
[2025-06-05 12:33:16] No cvmfs_config command found, will try listing directly
[2025-06-05 12:33:16] CVMFS is ok
[2025-06-05 12:33:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:33:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:33:16] Further information can be found at the LHC@home message board.
[2025-06-05 12:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:33:16] Checking for apptainer binary...
[2025-06-05 12:33:16] which: no apptainer in ((null))
[2025-06-05 12:33:16] apptainer is not installed, using version from CVMFS
[2025-06-05 12:33:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:33:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-05 12:33:17] apptainer works
[2025-06-05 12:33:17] Set ATHENA_PROC_NUMBER=4
[2025-06-05 12:33:17] Set ATHENA_CORE_NUMBER=4
[2025-06-05 12:33:17] Starting ATLAS job with PandaID=6677919835
[2025-06-05 12:33:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:21:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:21:38] 2025-06-05 13:19:11,961 | INFO     | total number of processed events: 400 (read)
[2025-06-05 15:21:38] 2025-06-05 13:19:11,965 | INFO     | executing command: lscpu
[2025-06-05 15:21:38] 2025-06-05 13:19:12,027 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 15:21:38] 2025-06-05 13:19:13,535 | WARNING  | process 2485390 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 15:21:38] 2025-06-05 13:19:13,536 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677919835/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:21:38] 2025-06-05 13:19:13,883 | INFO     | number of running child processes to parent process 2485390: 1
[2025-06-05 15:21:38] 2025-06-05 13:19:13,883 | INFO     | maximum number of monitored processes: 6
[2025-06-05 15:21:38] 2025-06-05 13:19:16,096 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:21:38] 2025-06-05 13:19:16,096 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677919835/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,097 | INFO     | extracted standard info from prmon json
[2025-06-05 15:21:38] 2025-06-05 13:19:16,097 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:21:38] 2025-06-05 13:19:16,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:21:38] 2025-06-05 13:19:16,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:21:38] 2025-06-05 13:19:16,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:21:38] 2025-06-05 13:19:16,101 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:21:38] 2025-06-05 13:19:16,101 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,102 | INFO     | sum of deviations: -11956096074.999998
[2025-06-05 15:21:38] 2025-06-05 13:19:16,102 | INFO     | mean x: 1749124576.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,102 | INFO     | mean y: 2364377.926380368
[2025-06-05 15:21:38] 2025-06-05 13:19:16,103 | INFO     | -- intersect: 15575829232.711899
[2025-06-05 15:21:38] 2025-06-05 13:19:16,103 | INFO     | intersect: 15575829232.711899
[2025-06-05 15:21:38] 2025-06-05 13:19:16,103 | INFO     | chi2: 1.6333615214177573
[2025-06-05 15:21:38] 2025-06-05 13:19:16,103 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 15:21:38] 2025-06-05 13:19:16,104 | INFO     | sum of deviations: -11230223281.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,104 | INFO     | mean x: 1749124423.5
[2025-06-05 15:21:38] 2025-06-05 13:19:16,104 | INFO     | mean y: 2365301.9493670887
[2025-06-05 15:21:38] 2025-06-05 13:19:16,104 | INFO     | -- intersect: 16063521561.96588
[2025-06-05 15:21:38] 2025-06-05 13:19:16,104 | INFO     | intersect: 16063521561.96588
[2025-06-05 15:21:38] 2025-06-05 13:19:16,105 | INFO     | chi2: 1.6319946623403163
[2025-06-05 15:21:38] 2025-06-05 13:19:16,105 | INFO     | current chi2=1.6319946623403163 (change=0.08368380542321747 %)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,105 | INFO     | right removable region: 157
[2025-06-05 15:21:38] 2025-06-05 13:19:16,105 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 15:21:38] 2025-06-05 13:19:16,106 | INFO     | sum of deviations: -34422706168.5
[2025-06-05 15:21:38] 2025-06-05 13:19:16,106 | INFO     | mean x: 1749124728.5
[2025-06-05 15:21:38] 2025-06-05 13:19:16,106 | INFO     | mean y: 2392520.2215189873
[2025-06-05 15:21:38] 2025-06-05 13:19:16,106 | INFO     | -- intersect: 49232808090.46223
[2025-06-05 15:21:38] 2025-06-05 13:19:16,106 | INFO     | intersect: 49232808090.46223
[2025-06-05 15:21:38] 2025-06-05 13:19:16,107 | INFO     | chi2: 0.1282856842182745
[2025-06-05 15:21:38] 2025-06-05 13:19:16,107 | INFO     | current chi2=0.1282856842182745 (change=92.14590998158677 %)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,107 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,108 | INFO     | sum of deviations: -28654838754.999992
[2025-06-05 15:21:38] 2025-06-05 13:19:16,108 | INFO     | mean x: 1749124881.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,108 | INFO     | mean y: 2384661.0784313725
[2025-06-05 15:21:38] 2025-06-05 13:19:16,108 | INFO     | -- intersect: 45134389182.905685
[2025-06-05 15:21:38] 2025-06-05 13:19:16,108 | INFO     | intersect: 45134389182.905685
[2025-06-05 15:21:38] 2025-06-05 13:19:16,109 | INFO     | chi2: 0.11341689139050815
[2025-06-05 15:21:38] 2025-06-05 13:19:16,109 | INFO     | current chi2=0.11341689139050815 (change=11.590375744862937 %)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,109 | INFO     | left removable region: 20
[2025-06-05 15:21:38] 2025-06-05 13:19:16,109 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,110 | INFO     | sum of deviations: -14791907263.000002
[2025-06-05 15:21:38] 2025-06-05 13:19:16,110 | INFO     | mean x: 1749125003.0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,110 | INFO     | mean y: 2366533.583941606
[2025-06-05 15:21:38] 2025-06-05 13:19:16,110 | INFO     | -- intersect: 32453363016.60382
[2025-06-05 15:21:38] 2025-06-05 13:19:16,110 | INFO     | intersect: 32453363016.60382
[2025-06-05 15:21:38] 2025-06-05 13:19:16,110 | INFO     | chi2: 0.041699453057255156
[2025-06-05 15:21:38] 2025-06-05 13:19:16,111 | INFO     | -- intersect: 32453363016.60382
[2025-06-05 15:21:38] 2025-06-05 13:19:16,111 | INFO     | current memory leak: -18.55 B/s (using 137 data points, chi2=0.04)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,111 | INFO     | ..............................
[2025-06-05 15:21:38] 2025-06-05 13:19:16,111 | INFO     | . Timing measurements:
[2025-06-05 15:21:38] 2025-06-05 13:19:16,111 | INFO     | . get job = 0 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | . initial setup = 1 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | . payload setup = 7 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | . stage-in = 0 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | . payload execution = 9916 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | . stage-out = 0 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | . log creation = 0 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,112 | INFO     | ..............................
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | 
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | job summary report
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | --------------------------------------------------
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | PanDA job id: 6677919835
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | task id: 45006595
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | errors: (none)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:21:38] 2025-06-05 13:19:16,224 | INFO     | pilot state: finished 
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | transexitcode: 0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | exeerrorcode: 0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | exeerrordiag: 
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | exitcode: 0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | exitmsg: OK
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | cpuconsumptiontime: 37891 s
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | nevents: 400
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | neventsw: 0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | pid: 2485390
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | pgrp: 2485390
[2025-06-05 15:21:38] 2025-06-05 13:19:16,225 | INFO     | corecount: 4
[2025-06-05 15:21:38] 2025-06-05 13:19:16,226 | INFO     | event service: False
[2025-06-05 15:21:38] 2025-06-05 13:19:16,226 | INFO     | sizes: {0: 2396463, 1: 2397330, 6: 2397536, 12: 2397564, 9927: 2425854, 9928: 2425853, 9929: 2435056, 9933: 2435170}
[2025-06-05 15:21:38] 2025-06-05 13:19:16,226 | INFO     | --------------------------------------------------
[2025-06-05 15:21:38] 2025-06-05 13:19:16,226 | INFO     | 
[2025-06-05 15:21:38] 2025-06-05 13:19:16,226 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-05 15:21:38] 2025-06-05 13:19:16,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,249 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:21:38] 2025-06-05 13:19:16,249 | INFO     | job 6677919835 has completed (purged errors)
[2025-06-05 15:21:38] 2025-06-05 13:19:16,249 | INFO     | overall cleanup function is called
[2025-06-05 15:21:38] 2025-06-05 13:19:17,257 | INFO     | --- collectZombieJob: --- 10, [2485390]
[2025-06-05 15:21:38] 2025-06-05 13:19:17,257 | INFO     | zombie collector waiting for pid 2485390
[2025-06-05 15:21:38] 2025-06-05 13:19:17,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:21:38] 2025-06-05 13:19:17,257 | INFO     | collected zombie processes
[2025-06-05 15:21:38] 2025-06-05 13:19:17,257 | INFO     | will attempt to kill all subprocesses of pid=2485390
[2025-06-05 15:21:38] 2025-06-05 13:19:17,587 | INFO     | process IDs to be killed: [2485390] (in reverse order)
[2025-06-05 15:21:38] 2025-06-05 13:19:17,693 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:21:38] 2025-06-05 13:19:17,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:21:38] 2025-06-05 13:19:17,705 | INFO     | did not find any defunct processes belonging to 2485390
[2025-06-05 15:21:38] 2025-06-05 13:19:17,716 | INFO     | did not find any defunct processes belonging to 2485390
[2025-06-05 15:21:38] 2025-06-05 13:19:17,717 | INFO     | ready for new job
[2025-06-05 15:21:38] 2025-06-05 13:19:17,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:21:38] 2025-06-05 13:19:17,719 | INFO     | **************************************
[2025-06-05 15:21:38] 2025-06-05 13:19:17,719 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:21:38] 2025-06-05 13:19:17,719 | INFO     | **************************************
[2025-06-05 15:21:38] 2025-06-05 13:19:17,719 | INFO     | 
[2025-06-05 15:21:38] 2025-06-05 13:19:17,723 | INFO     | architecture information:
[2025-06-05 15:21:38] 2025-06-05 13:19:17,724 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:21:38] 2025-06-05 13:19:17,739 | INFO     | cat /etc/os-release:
[2025-06-05 15:21:38] NAME="CentOS Linux"
[2025-06-05 15:21:38] VERSION="7 (Core)"
[2025-06-05 15:21:38] ID="centos"
[2025-06-05 15:21:38] ID_LIKE="rhel fedora"
[2025-06-05 15:21:38] VERSION_ID="7"
[2025-06-05 15:21:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:21:38] ANSI_COLOR="0;31"
[2025-06-05 15:21:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:21:38] HOME_URL="https://www.centos.org/"
[2025-06-05 15:21:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:21:38] 
[2025-06-05 15:21:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:21:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:21:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:21:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:21:38] 
[2025-06-05 15:21:38] 2025-06-05 13:19:17,740 | INFO     | **************************************
[2025-06-05 15:21:38] 2025-06-05 13:19:18,243 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-05 15:21:38] 2025-06-05 13:19:18,260 | INFO     | sufficient remaining disk space (669511581696 B)
[2025-06-05 15:21:38] 2025-06-05 13:19:18,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:21:38] 2025-06-05 13:19:18,260 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:21:38] 2025-06-05 13:19:18,261 | INFO     | update_server=False
[2025-06-05 15:21:38] 2025-06-05 13:19:18,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:21:38] 2025-06-05 13:19:18,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:21:38] 2025-06-05 13:19:18,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:21:38] 2025-06-05 13:19:18,262 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:21:38] 2025-06-05 13:19:18,262 | INFO     | aborting loop
[2025-06-05 15:21:38] 2025-06-05 13:19:18,262 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:21:38] 2025-06-05 13:19:18,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:21:38] 2025-06-05 13:19:18,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:21:38] 2025-06-05 13:19:19,129 | INFO     | all payload control threads have been joined
[2025-06-05 15:21:38] 2025-06-05 13:19:19,214 | INFO     | all data control threads have been joined
[2025-06-05 15:21:38] 2025-06-05 13:19:19,266 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:19,268 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:19,345 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:19,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:21:38] 2025-06-05 13:19:19,501 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:19,573 | INFO     | all job control threads have been joined
[2025-06-05 15:21:38] 2025-06-05 13:19:20,029 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,136 | INFO     | [payload] control thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,219 | INFO     | [data] control thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,380 | INFO     | [job] validate thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,403 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,403 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,579 | INFO     | [job] control thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,621 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:20,763 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:21,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:21:38] 2025-06-05 13:19:21,457 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:22,229 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:22,268 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:21:38] 2025-06-05 13:19:23,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22358222858048)>', '<ExcThread(monitor, started 22357775193856)>']
[2025-06-05 15:21:38] 2025-06-05 13:19:24,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:21:38] 2025-06-05 13:19:24,287 | INFO     | [monitor] control thread has ended
[2025-06-05 15:21:38] 2025-06-05 13:19:28,883 | INFO     | all workflow threads have been joined
[2025-06-05 15:21:38] 2025-06-05 13:19:28,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:21:38] 2025-06-05 13:19:28,884 | INFO     | traces error code: 0
[2025-06-05 15:21:38] 2025-06-05 13:19:28,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:21:38] 2025-06-05 13:19:29,044 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:21:38] 2025-06-05 13:19:29,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:21:38] 2025-06-05 13:19:29,051 [wrapper] pilotpid: 2478305
[2025-06-05 15:21:38] 2025-06-05 13:19:29,053 [wrapper] Pilot exit status: 0
[2025-06-05 15:21:38] 2025-06-05 13:19:29,064 [wrapper] pandaids: 6677919835
[2025-06-05 15:21:38] 2025-06-05 13:19:29,131 [wrapper] cleanup supervisor_pilot 2760247 2478306
[2025-06-05 15:21:38] 2025-06-05 13:19:29,134 [wrapper] Test setup, not cleaning
[2025-06-05 15:21:38] 2025-06-05 13:19:29,137 [wrapper] apfmon messages muted
[2025-06-05 15:21:38] 2025-06-05 13:19:29,140 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:21:38] 2025-06-05 13:19:29,143 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:21:38]  *** Error codes and diagnostics ***
[2025-06-05 15:21:38]     "exeErrorCode": 0,
[2025-06-05 15:21:38]     "exeErrorDiag": "",
[2025-06-05 15:21:38]     "pilotErrorCode": 0,
[2025-06-05 15:21:38]     "pilotErrorDiag": "",
[2025-06-05 15:21:38]  *** Listing of results directory ***
[2025-06-05 15:21:38] total 391988
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:01 queuedata.json
[2025-06-05 15:21:38] -rwx------ 1 boinc boinc     37140 Jun  3 20:01 runpilot2-wrapper.sh
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc       100 Jun  5 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:21:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 12:33 run_atlas
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc       105 Jun  5 12:33 job.xml
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc      6635 Jun  5 12:33 init_data.xml
[2025-06-05 15:21:38] -rw-r--r-- 2 boinc boinc 214503190 Jun  5 12:33 EVNT.45006593._001674.pool.root.1
[2025-06-05 15:21:38] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:33 start_atlas.sh
[2025-06-05 15:21:38] drwxrwx--x 2 boinc boinc      4096 Jun  5 12:33 shared
[2025-06-05 15:21:38] -rw-r--r-- 2 boinc boinc    508877 Jun  5 12:33 input.tar.gz
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc         0 Jun  5 12:33 boinc_lockfile
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc      2524 Jun  5 12:33 pandaJob.out
[2025-06-05 15:21:38] -rw------- 1 boinc boinc    982836 Jun  5 12:33 agis_schedconf.cvmfs.json
[2025-06-05 15:21:38] -rw------- 1 boinc boinc   1598969 Jun  5 12:33 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:21:38] drwx------ 4 boinc boinc      4096 Jun  5 12:33 pilot3
[2025-06-05 15:21:38] -rw------- 1 boinc boinc 180599743 Jun  5 15:18 HITS.45006595._041761.pool.root.1
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc       528 Jun  5 15:18 boinc_task_state.xml
[2025-06-05 15:21:38] -rw------- 1 boinc boinc      1033 Jun  5 15:19 memory_monitor_summary.json
[2025-06-05 15:21:38] -rw------- 1 boinc boinc    296884 Jun  5 15:19 log.45006595._041761.job.log.tgz.1
[2025-06-05 15:21:38] -rw------- 1 boinc boinc        95 Jun  5 15:19 pilot_heartbeat.json
[2025-06-05 15:21:38] -rw------- 1 boinc boinc      7726 Jun  5 15:19 heartbeat.json
[2025-06-05 15:21:38] -rw------- 1 boinc boinc      4486 Jun  5 15:19 pilotlog.txt
[2025-06-05 15:21:38] -rw------- 1 boinc boinc    938224 Jun  5 15:19 log.45006595._041761.job.log.1
[2025-06-05 15:21:38] -rw------- 1 boinc boinc       357 Jun  5 15:19 output.list
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc       620 Jun  5 15:19 runtime_log
[2025-06-05 15:21:38] -rw------- 1 boinc boinc   1249280 Jun  5 15:19 result.tar.gz
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc      9025 Jun  5 15:19 runtime_log.err
[2025-06-05 15:21:38] -rw------- 1 boinc boinc       663 Jun  5 15:19 1a3LDmZ8kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQalKDmeAunon.diag
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc        26 Jun  5 15:21 wrapper_checkpoint.txt
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc      8192 Jun  5 15:21 boinc_mmap_file
[2025-06-05 15:21:38] -rw-r--r-- 1 boinc boinc     20949 Jun  5 15:21 stderr.txt
[2025-06-05 15:21:38] HITS file was successfully produced:
[2025-06-05 15:21:38] -rw------- 1 boinc boinc 180599743 Jun  5 15:18 shared/HITS.pool.root.1
[2025-06-05 15:21:38]  *** Contents of shared directory: ***
[2025-06-05 15:21:38] total 387588
[2025-06-05 15:21:38] -rw-r--r-- 2 boinc boinc 214503190 Jun  5 12:33 ATLAS.root_0
[2025-06-05 15:21:38] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:33 start_atlas.sh
[2025-06-05 15:21:38] -rw-r--r-- 2 boinc boinc    508877 Jun  5 12:33 input.tar.gz
[2025-06-05 15:21:38] -rw------- 1 boinc boinc 180599743 Jun  5 15:18 HITS.pool.root.1
[2025-06-05 15:21:38] -rw------- 1 boinc boinc   1249280 Jun  5 15:19 result.tar.gz
15:21:40 (2474642): run_atlas exited; CPU time 38269.110780
15:21:40 (2474642): called boinc_finish(0)

</stderr_txt>
]]>

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