Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:45 (15234): wrapper (7.7.26015): starting
10:16:45 (15234): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:16:45] Arguments: --nthreads 8
[2025-06-04 10:16:45] Threads: 8
[2025-06-04 10:16:45] Checking for CVMFS
[2025-06-04 10:16:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:16:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:16:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:16:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:16:49] 2.11.2.0 14868 33083 100732 146772 1 69 16392438 25165824 2745 130560 0 16981067 99.762 20898816 2586 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:16:49] CVMFS is ok
[2025-06-04 10:16:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:16:49] Checking for apptainer binary...
[2025-06-04 10:16:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:16:49] Running /usr/bin/apptainer --version
[2025-06-04 10:16:49] apptainer version 1.3.2-1.el7
[2025-06-04 10:16:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:26:54] cg-vwn478.simple-grid.lan
[2025-06-04 10:26:54] apptainer works
[2025-06-04 10:26:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:26:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:26:54] Starting ATLAS job with PandaID=6677783030
[2025-06-04 10:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:58:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:58:50] 2025-06-04 12:11:39,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:58:50] 2025-06-04 12:11:39,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:58:50] 2025-06-04 12:11:39,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:58:50] 2025-06-04 12:11:39,179 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:58:50] 2025-06-04 12:11:39,179 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,181 | INFO     | sum of deviations: 49527735855.999985
[2025-06-04 14:58:50] 2025-06-04 12:11:39,181 | INFO     | mean x: 1749032650.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,181 | INFO     | mean y: 2439046.7224880382
[2025-06-04 14:58:50] 2025-06-04 12:11:39,181 | INFO     | -- intersect: -30598802839.554176
[2025-06-04 14:58:50] 2025-06-04 12:11:39,181 | INFO     | intersect: -30598802839.554176
[2025-06-04 14:58:50] 2025-06-04 12:11:39,182 | INFO     | chi2: 6.6411388406978915
[2025-06-04 14:58:50] 2025-06-04 12:11:39,182 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,184 | INFO     | sum of deviations: 62027830053.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,184 | INFO     | mean x: 1749032497.5
[2025-06-04 14:58:50] 2025-06-04 12:11:39,184 | INFO     | mean y: 2448452.5784313725
[2025-06-04 14:58:50] 2025-06-04 12:11:39,184 | INFO     | -- intersect: -41209768443.317474
[2025-06-04 14:58:50] 2025-06-04 12:11:39,184 | INFO     | intersect: -41209768443.317474
[2025-06-04 14:58:50] 2025-06-04 12:11:39,184 | INFO     | chi2: 5.9416743206067535
[2025-06-04 14:58:50] 2025-06-04 12:11:39,185 | INFO     | current chi2=5.9416743206067535 (change=10.532297801164988 %)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,185 | INFO     | right removable region: 203
[2025-06-04 14:58:50] 2025-06-04 12:11:39,185 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,187 | INFO     | sum of deviations: -22071661323.499992
[2025-06-04 14:58:50] 2025-06-04 12:11:39,187 | INFO     | mean x: 1749032802.5
[2025-06-04 14:58:50] 2025-06-04 12:11:39,187 | INFO     | mean y: 2494038.661764706
[2025-06-04 14:58:50] 2025-06-04 12:11:39,187 | INFO     | -- intersect: 14667238098.891483
[2025-06-04 14:58:50] 2025-06-04 12:11:39,187 | INFO     | intersect: 14667238098.891483
[2025-06-04 14:58:50] 2025-06-04 12:11:39,188 | INFO     | chi2: 1.8684838008358897
[2025-06-04 14:58:50] 2025-06-04 12:11:39,188 | INFO     | current chi2=1.8684838008358897 (change=71.86500921520354 %)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,188 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,189 | INFO     | sum of deviations: -47978235023.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,190 | INFO     | mean x: 1749032955.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,190 | INFO     | mean y: 2514761.9798994977
[2025-06-04 14:58:50] 2025-06-04 12:11:39,190 | INFO     | -- intersect: 34343723209.87859
[2025-06-04 14:58:50] 2025-06-04 12:11:39,190 | INFO     | intersect: 34343723209.87859
[2025-06-04 14:58:50] 2025-06-04 12:11:39,190 | INFO     | chi2: 0.9596263477085537
[2025-06-04 14:58:50] 2025-06-04 12:11:39,190 | INFO     | current chi2=0.9596263477085537 (change=48.64144140402754 %)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,191 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 14:58:50] 2025-06-04 12:11:39,192 | INFO     | sum of deviations: -44563128215.5
[2025-06-04 14:58:50] 2025-06-04 12:11:39,192 | INFO     | mean x: 1749033107.5
[2025-06-04 14:58:50] 2025-06-04 12:11:39,192 | INFO     | mean y: 2511825.8917525774
[2025-06-04 14:58:50] 2025-06-04 12:11:39,192 | INFO     | -- intersect: 34429705730.96894
[2025-06-04 14:58:50] 2025-06-04 12:11:39,193 | INFO     | intersect: 34429705730.96894
[2025-06-04 14:58:50] 2025-06-04 12:11:39,193 | INFO     | chi2: 0.9504667892630421
[2025-06-04 14:58:50] 2025-06-04 12:11:39,193 | INFO     | current chi2=0.9504667892630421 (change=0.9544921799389227 %)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,193 | INFO     | left removable region: 30
[2025-06-04 14:58:50] 2025-06-04 12:11:39,193 | INFO     | sum of square deviations: 1605470102.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | sum of deviations: -11517905442.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | mean x: 1749033382.0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | mean y: 2504750.3468208094
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | -- intersect: 12550356674.640995
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | intersect: 12550356674.640995
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | chi2: 0.09778534454979239
[2025-06-04 14:58:50] 2025-06-04 12:11:39,195 | INFO     | -- intersect: 12550356674.640995
[2025-06-04 14:58:50] 2025-06-04 12:11:39,196 | INFO     | current memory leak: -7.17 B/s (using 173 data points, chi2=0.10)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,196 | INFO     | ..............................
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . Timing measurements:
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . get job = 0 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . initial setup = 7 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . payload setup = 164 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . stage-in = 0 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . payload execution = 12861 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . stage-out = 3 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | . log creation = 1 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,197 | INFO     | ..............................
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | 
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | job summary report
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | --------------------------------------------------
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | PanDA job id: 6677783030
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | task id: 45006595
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | errors: (none)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | pilot state: finished 
[2025-06-04 14:58:50] 2025-06-04 12:11:39,349 | INFO     | transexitcode: 0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | exeerrorcode: 0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | exeerrordiag: 
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | exitcode: 0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | exitmsg: OK
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | cpuconsumptiontime: 45722 s
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | nevents: 400
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | neventsw: 0
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | pid: 5101
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | pgrp: 5101
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | corecount: 8
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | event service: False
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 84: 2405770, 87: 2405798, 13030: 2435252
[2025-06-04 14:58:50] 2025-06-04 12:11:39,350 | INFO     | --------------------------------------------------
[2025-06-04 14:58:50] 2025-06-04 12:11:39,351 | INFO     | 
[2025-06-04 14:58:50] 2025-06-04 12:11:39,351 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 14:58:50] 2025-06-04 12:11:39,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | job 6677783030 has completed (purged errors)
[2025-06-04 14:58:50] 2025-06-04 12:11:39,568 | INFO     | overall cleanup function is called
[2025-06-04 14:58:50] 2025-06-04 12:11:40,578 | INFO     | --- collectZombieJob: --- 10, [5101]
[2025-06-04 14:58:50] 2025-06-04 12:11:40,578 | INFO     | zombie collector waiting for pid 5101
[2025-06-04 14:58:50] 2025-06-04 12:11:40,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:58:50] 2025-06-04 12:11:40,578 | INFO     | collected zombie processes
[2025-06-04 14:58:50] 2025-06-04 12:11:40,578 | INFO     | will attempt to kill all subprocesses of pid=5101
[2025-06-04 14:58:50] 2025-06-04 12:11:40,694 | INFO     | process IDs to be killed: [5101] (in reverse order)
[2025-06-04 14:58:50] 2025-06-04 12:11:41,496 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:58:50] 2025-06-04 12:11:41,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:58:50] 2025-06-04 12:11:41,500 | INFO     | did not find any defunct processes belonging to 5101
[2025-06-04 14:58:50] 2025-06-04 12:11:41,503 | INFO     | did not find any defunct processes belonging to 5101
[2025-06-04 14:58:50] 2025-06-04 12:11:41,504 | INFO     | ready for new job
[2025-06-04 14:58:50] 2025-06-04 12:11:41,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:58:50] 2025-06-04 12:11:41,506 | INFO     | **************************************
[2025-06-04 14:58:50] 2025-06-04 12:11:41,506 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:58:50] 2025-06-04 12:11:41,506 | INFO     | **************************************
[2025-06-04 14:58:50] 2025-06-04 12:11:41,506 | INFO     | 
[2025-06-04 14:58:50] 2025-06-04 12:11:41,506 | INFO     | pilot is running in a VM
[2025-06-04 14:58:50] 2025-06-04 12:11:41,507 | INFO     | architecture information:
[2025-06-04 14:58:50] 2025-06-04 12:11:41,510 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:58:50] 2025-06-04 12:11:41,616 | INFO     | cat /etc/os-release:
[2025-06-04 14:58:50] NAME="CentOS Linux"
[2025-06-04 14:58:50] VERSION="7 (Core)"
[2025-06-04 14:58:50] ID="centos"
[2025-06-04 14:58:50] ID_LIKE="rhel fedora"
[2025-06-04 14:58:50] VERSION_ID="7"
[2025-06-04 14:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:58:50] ANSI_COLOR="0;31"
[2025-06-04 14:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:58:50] HOME_URL="https://www.centos.org/"
[2025-06-04 14:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:58:50] 
[2025-06-04 14:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:58:50] 
[2025-06-04 14:58:50] 2025-06-04 12:11:41,617 | INFO     | **************************************
[2025-06-04 14:58:50] 2025-06-04 12:11:42,121 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 14:58:50] 2025-06-04 12:11:42,295 | INFO     | sufficient remaining disk space (496920166400 B)
[2025-06-04 14:58:50] 2025-06-04 12:11:42,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:58:50] 2025-06-04 12:11:42,296 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:58:50] 2025-06-04 12:11:42,296 | INFO     | update_server=False
[2025-06-04 14:58:50] 2025-06-04 12:11:42,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:58:50] 2025-06-04 12:11:42,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:58:50] 2025-06-04 12:11:42,617 | INFO     | PID=27038 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 14:58:50] 2025-06-04 12:11:42,618 | INFO     | .. there are 9 such processes running
[2025-06-04 14:58:50] 2025-06-04 12:11:42,618 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:58:50] 2025-06-04 12:11:42,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:58:50] 2025-06-04 12:11:42,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:58:50] 2025-06-04 12:11:42,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:58:50] 2025-06-04 12:11:42,795 | INFO     | aborting loop
[2025-06-04 14:58:50] 2025-06-04 12:11:42,887 | INFO     | all payload control threads have been joined
[2025-06-04 14:58:50] 2025-06-04 12:11:43,061 | INFO     | all data control threads have been joined
[2025-06-04 14:58:50] 2025-06-04 12:11:43,303 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:43,478 | INFO     | all job control threads have been joined
[2025-06-04 14:58:50] 2025-06-04 12:11:43,631 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:43,655 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:43,766 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:43,801 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:43,880 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:43,893 | INFO     | [payload] control thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:44,069 | INFO     | [data] control thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:44,139 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:44,139 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:44,308 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:44,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:58:50] 2025-06-04 12:11:44,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:58:50] 2025-06-04 12:11:44,485 | INFO     | [job] control thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:44,521 | INFO     | [job] validate thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:45,365 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:48,447 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:52,798 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:58:50] 2025-06-04 12:11:53,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:58:50] 2025-06-04 12:11:55,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983594600256)>', '<ExcThread(monitor, started 139983151150848)>']
[2025-06-04 14:58:50] 2025-06-04 12:11:55,699 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:58:50] 2025-06-04 12:11:55,700 | INFO     | [monitor] control thread has ended
[2025-06-04 14:58:50] 2025-06-04 12:12:00,664 | INFO     | all workflow threads have been joined
[2025-06-04 14:58:50] 2025-06-04 12:12:00,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:58:50] 2025-06-04 12:12:00,664 | INFO     | traces error code: 0
[2025-06-04 14:58:50] 2025-06-04 12:12:00,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:58:50] 2025-06-04 12:12:01,170 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:58:50] 2025-06-04 12:12:01,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:58:50] 2025-06-04 12:12:01,297 [wrapper] pilotpid: 27038
[2025-06-04 14:58:50] 2025-06-04 12:12:01,346 [wrapper] Pilot exit status: 0
[2025-06-04 14:58:50] 2025-06-04 12:12:01,672 [wrapper] pandaids: 6677783030
[2025-06-04 14:58:50] 2025-06-04 12:12:02,212 [wrapper] cleanup supervisor_pilot 28221 27039
[2025-06-04 14:58:50] 2025-06-04 12:12:02,321 [wrapper] Test setup, not cleaning
[2025-06-04 14:58:50] 2025-06-04 12:12:02,392 [wrapper] apfmon messages muted
[2025-06-04 14:58:50] 2025-06-04 12:12:02,437 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:58:50] 2025-06-04 12:12:02,500 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:58:50]  *** Error codes and diagnostics ***
[2025-06-04 14:58:50]     "exeErrorCode": 0,
[2025-06-04 14:58:50]     "exeErrorDiag": "",
[2025-06-04 14:58:50]     "pilotErrorCode": 0,
[2025-06-04 14:58:50]     "pilotErrorDiag": "",
[2025-06-04 14:58:50]  *** Listing of results directory ***
[2025-06-04 14:58:50] total 391500
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:42 queuedata.json
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 14:58:50] -rwx------. 1 boinc boinc     37140 Jun  3 18:44 runpilot2-wrapper.sh
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:58:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:16 run_atlas
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:16 job.xml
[2025-06-04 14:58:50] -rw-r--r--. 2 boinc boinc 213003938 Jun  4 10:16 EVNT.45006593._001564.pool.root.1
[2025-06-04 14:58:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:16 start_atlas.sh
[2025-06-04 14:58:50] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:16 shared
[2025-06-04 14:58:50] -rw-r--r--. 2 boinc boinc    508882 Jun  4 10:16 input.tar.gz
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:16 init_data.xml
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:16 boinc_lockfile
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:26 pandaJob.out
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc    986774 Jun  4 10:30 agis_schedconf.cvmfs.json
[2025-06-04 14:58:50] drwx------. 4 boinc boinc      4096 Jun  4 10:30 pilot3
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc 181042209 Jun  4 14:09 HITS.45006595._038994.pool.root.1
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:09 boinc_task_state.xml
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc      1018 Jun  4 14:10 memory_monitor_summary.json
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc   1598969 Jun  4 14:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc    374334 Jun  4 14:10 log.45006595._038994.job.log.tgz.1
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc        95 Jun  4 14:11 pilot_heartbeat.json
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc      7690 Jun  4 14:11 heartbeat.json
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc      4880 Jun  4 14:12 pilotlog.txt
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc   1139232 Jun  4 14:12 log.45006595._038994.job.log.1
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc       357 Jun  4 14:12 output.list
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:12 runtime_log
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc   1536000 Jun  4 14:12 result.tar.gz
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:12 runtime_log.err
[2025-06-04 14:58:50] -rw-------. 1 boinc boinc       657 Jun  4 14:12 KNsLDmEvjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm86kKDmIfs3Kn.diag
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:58 boinc_mmap_file
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:58 wrapper_checkpoint.txt
[2025-06-04 14:58:50] -rw-r--r--. 1 boinc boinc     20569 Jun  4 14:58 stderr.txt
[2025-06-04 14:58:51] HITS file was successfully produced:
[2025-06-04 14:58:51] -rw-------. 1 boinc boinc 181042209 Jun  4 14:09 shared/HITS.pool.root.1
[2025-06-04 14:58:51]  *** Contents of shared directory: ***
[2025-06-04 14:58:51] total 386828
[2025-06-04 14:58:51] -rw-r--r--. 2 boinc boinc 213003938 Jun  4 10:16 ATLAS.root_0
[2025-06-04 14:58:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:16 start_atlas.sh
[2025-06-04 14:58:51] -rw-r--r--. 2 boinc boinc    508882 Jun  4 10:16 input.tar.gz
[2025-06-04 14:58:51] -rw-------. 1 boinc boinc 181042209 Jun  4 14:09 HITS.pool.root.1
[2025-06-04 14:58:51] -rw-------. 1 boinc boinc   1536000 Jun  4 14:12 result.tar.gz
14:58:52 (15234): run_atlas exited; CPU time 45884.822805
14:58:52 (15234): called boinc_finish(0)

</stderr_txt>
]]>

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