Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:49 (312917): wrapper (7.7.26015): starting
03:45:49 (312917): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 03:45:49] Arguments: --nthreads 4
[2025-06-05 03:45:49] Threads: 4
[2025-06-05 03:45:49] Checking for CVMFS
[2025-06-05 03:45:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:45:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:45:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:45:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:45:49] 2.12.7.0 3155475 3025 53584 146800 0 56 5139262 6144001 917 130560 0 3878406 99.994 688623 14090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-06-05 03:45:49] CVMFS is ok
[2025-06-05 03:45:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:45:49] Checking for apptainer binary...
[2025-06-05 03:45:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:45:49] Running /usr/bin/apptainer --version
[2025-06-05 03:45:49] apptainer version 1.4.0
[2025-06-05 03:45:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:45:49] TS-P320
[2025-06-05 03:45:49] apptainer works
[2025-06-05 03:45:49] Set ATHENA_PROC_NUMBER=4
[2025-06-05 03:45:49] Set ATHENA_CORE_NUMBER=4
[2025-06-05 03:45:49] Starting ATLAS job with PandaID=6677919156
[2025-06-05 03:45:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:35:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:35:06] 2025-06-05 03:34:54,620 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6677919156/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,620 | INFO     | extracted standard info from prmon json
[2025-06-05 05:35:06] 2025-06-05 03:34:54,620 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:35:06] 2025-06-05 03:34:54,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:35:06] 2025-06-05 03:34:54,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:35:06] 2025-06-05 03:34:54,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:35:06] 2025-06-05 03:34:54,622 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:35:06] 2025-06-05 03:34:54,623 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,623 | INFO     | sum of deviations: 400033485.99999946
[2025-06-05 05:35:06] 2025-06-05 03:34:54,623 | INFO     | mean x: 1749091207.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,623 | INFO     | mean y: 2372780.046728972
[2025-06-05 05:35:06] 2025-06-05 03:34:54,623 | INFO     | -- intersect: -1839743246.1031015
[2025-06-05 05:35:06] 2025-06-05 03:34:54,623 | INFO     | intersect: -1839743246.1031015
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | chi2: 1.4035306951500055
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | sum of deviations: 638054845.499999
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | mean x: 1749091054.5
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | mean y: 2373495.088235294
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | -- intersect: -3389449932.4272246
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | intersect: -3389449932.4272246
[2025-06-05 05:35:06] 2025-06-05 03:34:54,624 | INFO     | chi2: 1.405263381492661
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | current chi2=1.405263381492661 (change=-0.12345197355803166 %)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | right removable region: 101
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | sum of deviations: -10308024945.499998
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | mean x: 1749091359.5
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | mean y: 2403726.5392156863
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | -- intersect: 54798643963.34947
[2025-06-05 05:35:06] 2025-06-05 03:34:54,625 | INFO     | intersect: 54798643963.34947
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | chi2: 0.08080954809977771
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | current chi2=0.08080954809977771 (change=94.24240963314729 %)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | sum of deviations: -6740894975.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | mean x: 1749091512.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | mean y: 2391996.5463917525
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | -- intersect: 41668470332.64909
[2025-06-05 05:35:06] 2025-06-05 03:34:54,626 | INFO     | intersect: 41668470332.64909
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | chi2: 0.0598946131383622
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | current chi2=0.0598946131383622 (change=25.881762060581355 %)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | sum of square deviations: 241429643.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | sum of deviations: -4319361840.499998
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | mean x: 1749091664.5
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | mean y: 2383101.2934782607
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | -- intersect: 31294977073.18584
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | intersect: 31294977073.18584
[2025-06-05 05:35:06] 2025-06-05 03:34:54,627 | INFO     | chi2: 0.05064747586051181
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | current chi2=0.05064747586051181 (change=15.439013282360856 %)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | left removable region: 30
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | sum of square deviations: 110960220.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | sum of deviations: 547109976.0000001
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | mean x: 1749091939.0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | mean y: 2362725.056338028
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | -- intersect: -8621859980.77539
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | intersect: -8621859980.77539
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | chi2: 0.0009128538215213662
[2025-06-05 05:35:06] 2025-06-05 03:34:54,628 | INFO     | -- intersect: -8621859980.77539
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | current memory leak: 4.93 B/s (using 71 data points, chi2=0.00)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | ..............................
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . Timing measurements:
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . get job = 0 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . initial setup = 1 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . payload setup = 3 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . stage-in = 0 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . payload execution = 6512 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . stage-out = 0 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | . log creation = 0 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,629 | INFO     | ..............................
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | 
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | job summary report
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | --------------------------------------------------
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | PanDA job id: 6677919156
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | task id: 45006595
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | errors: (none)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | pilot state: finished 
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | transexitcode: 0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | exeerrorcode: 0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,696 | INFO     | exeerrordiag: 
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | exitcode: 0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | exitmsg: OK
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | cpuconsumptiontime: 24938 s
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | nevents: 400
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | neventsw: 0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | pid: 322993
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | pgrp: 322993
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | corecount: 4
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | event service: False
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | sizes: {0: 2397344, 2: 2397550, 11: 2397578, 6519: 2424585, 6520: 2424584, 6521: 2433583, 6522: 2433767, 6526: 2433937}
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | --------------------------------------------------
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | 
[2025-06-05 05:35:06] 2025-06-05 03:34:54,697 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:35:06] 2025-06-05 03:34:54,709 | INFO     | job 6677919156 has completed (purged errors)
[2025-06-05 05:35:06] 2025-06-05 03:34:54,710 | INFO     | overall cleanup function is called
[2025-06-05 05:35:06] 2025-06-05 03:34:55,714 | INFO     | --- collectZombieJob: --- 10, [322993]
[2025-06-05 05:35:06] 2025-06-05 03:34:55,715 | INFO     | zombie collector waiting for pid 322993
[2025-06-05 05:35:06] 2025-06-05 03:34:55,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:35:06] 2025-06-05 03:34:55,715 | INFO     | collected zombie processes
[2025-06-05 05:35:06] 2025-06-05 03:34:55,715 | INFO     | will attempt to kill all subprocesses of pid=322993
[2025-06-05 05:35:06] 2025-06-05 03:34:55,779 | INFO     | process IDs to be killed: [322993] (in reverse order)
[2025-06-05 05:35:06] 2025-06-05 03:34:55,804 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:35:06] 2025-06-05 03:34:55,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:35:06] 2025-06-05 03:34:55,806 | INFO     | did not find any defunct processes belonging to 322993
[2025-06-05 05:35:06] 2025-06-05 03:34:55,808 | INFO     | did not find any defunct processes belonging to 322993
[2025-06-05 05:35:06] 2025-06-05 03:34:55,808 | INFO     | ready for new job
[2025-06-05 05:35:06] 2025-06-05 03:34:55,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:35:06] 2025-06-05 03:34:55,809 | INFO     | **************************************
[2025-06-05 05:35:06] 2025-06-05 03:34:55,809 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:35:06] 2025-06-05 03:34:55,809 | INFO     | **************************************
[2025-06-05 05:35:06] 2025-06-05 03:34:55,809 | INFO     | 
[2025-06-05 05:35:06] 2025-06-05 03:34:55,810 | INFO     | architecture information:
[2025-06-05 05:35:06] 2025-06-05 03:34:55,810 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:35:06] 2025-06-05 03:34:55,818 | INFO     | cat /etc/os-release:
[2025-06-05 05:35:06] NAME="CentOS Linux"
[2025-06-05 05:35:06] VERSION="7 (Core)"
[2025-06-05 05:35:06] ID="centos"
[2025-06-05 05:35:06] ID_LIKE="rhel fedora"
[2025-06-05 05:35:06] VERSION_ID="7"
[2025-06-05 05:35:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:35:06] ANSI_COLOR="0;31"
[2025-06-05 05:35:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:35:06] HOME_URL="https://www.centos.org/"
[2025-06-05 05:35:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:35:06] 
[2025-06-05 05:35:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:35:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:35:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:35:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:35:06] 
[2025-06-05 05:35:06] 2025-06-05 03:34:55,818 | INFO     | **************************************
[2025-06-05 05:35:06] 2025-06-05 03:34:56,321 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 05:35:06] 2025-06-05 03:34:56,329 | INFO     | sufficient remaining disk space (204118949888 B)
[2025-06-05 05:35:06] 2025-06-05 03:34:56,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:35:06] 2025-06-05 03:34:56,329 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:35:06] 2025-06-05 03:34:56,329 | INFO     | update_server=False
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:35:06] 2025-06-05 03:34:56,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:35:06] 2025-06-05 03:34:56,360 | INFO     | all job control threads have been joined
[2025-06-05 05:35:06] 2025-06-05 03:34:56,644 | INFO     | all data control threads have been joined
[2025-06-05 05:35:06] 2025-06-05 03:34:56,753 | INFO     | all payload control threads have been joined
[2025-06-05 05:35:06] 2025-06-05 03:34:57,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:35:06] 2025-06-05 03:34:57,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:35:06] 2025-06-05 03:34:57,298 | INFO     | aborting loop
[2025-06-05 05:35:06] 2025-06-05 03:34:57,335 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:57,335 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:57,365 | INFO     | [job] control thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:57,458 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:57,591 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:57,646 | INFO     | [data] control thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:57,759 | INFO     | [payload] control thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,104 | INFO     | [job] validate thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,217 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,303 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,318 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,434 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:58,703 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:34:59,050 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:35:00,336 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:35:06] 2025-06-05 03:35:00,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123745766672192)>', '<ExcThread(monitor, started 123745054226176)>']
[2025-06-05 05:35:06] 2025-06-05 03:35:01,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:35:06] 2025-06-05 03:35:01,351 | INFO     | [monitor] control thread has ended
[2025-06-05 05:35:06] 2025-06-05 03:35:05,993 | INFO     | all workflow threads have been joined
[2025-06-05 05:35:06] 2025-06-05 03:35:05,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:35:06] 2025-06-05 03:35:05,993 | INFO     | traces error code: 0
[2025-06-05 05:35:06] 2025-06-05 03:35:05,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:35:06] 2025-06-05 03:35:06,063 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:35:06] 2025-06-05 03:35:06,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:35:06] 2025-06-05 03:35:06,066 [wrapper] pilotpid: 316531
[2025-06-05 05:35:06] 2025-06-05 03:35:06,068 [wrapper] Pilot exit status: 0
[2025-06-05 05:35:06] 2025-06-05 03:35:06,073 [wrapper] pandaids: 6677919156
[2025-06-05 05:35:06] 2025-06-05 03:35:06,090 [wrapper] cleanup supervisor_pilot  363078 316532
[2025-06-05 05:35:06] 2025-06-05 03:35:06,091 [wrapper] Test setup, not cleaning
[2025-06-05 05:35:06] 2025-06-05 03:35:06,093 [wrapper] apfmon messages muted
[2025-06-05 05:35:06] 2025-06-05 03:35:06,094 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:35:06] 2025-06-05 03:35:06,096 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:35:06]  *** Error codes and diagnostics ***
[2025-06-05 05:35:06]     "exeErrorCode": 0,
[2025-06-05 05:35:06]     "exeErrorDiag": "",
[2025-06-05 05:35:06]     "pilotErrorCode": 0,
[2025-06-05 05:35:06]     "pilotErrorDiag": "",
[2025-06-05 05:35:06]  *** Listing of results directory ***
[2025-06-05 05:35:06] insgesamt 389788
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc    495897  3. Jun 19:46 pilot3.tar.gz
[2025-06-05 05:35:06] -rwx------ 1 boinc boinc     37140  3. Jun 20:01 runpilot2-wrapper.sh
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc      5111  3. Jun 20:01 queuedata.json
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc       100  5. Jun 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:35:06] -rwxr-xr-x 1 boinc boinc      7986  5. Jun 03:45 run_atlas
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc       105  5. Jun 03:45 job.xml
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc      9809  5. Jun 03:45 init_data.xml
[2025-06-05 05:35:06] -rw-r--r-- 2 boinc boinc 216704702  5. Jun 03:45 EVNT.45006593._001663.pool.root.1
[2025-06-05 05:35:06] drwxrwx--x 2 boinc boinc      4096  5. Jun 03:45 shared
[2025-06-05 05:35:06] -rw-r--r-- 2 boinc boinc    508880  5. Jun 03:45 input.tar.gz
[2025-06-05 05:35:06] -rw-r--r-- 2 boinc boinc     15093  5. Jun 03:45 start_atlas.sh
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc         0  5. Jun 03:45 boinc_lockfile
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc      2526  5. Jun 03:45 pandaJob.out
[2025-06-05 05:35:06] -rw------- 1 boinc boinc    987109  5. Jun 03:45 agis_schedconf.cvmfs.json
[2025-06-05 05:35:06] -rw------- 1 boinc boinc   1598969  5. Jun 03:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:35:06] drwx------ 4 boinc boinc      4096  5. Jun 03:45 pilot3
[2025-06-05 05:35:06] -rw------- 1 boinc boinc 176778333  5. Jun 05:34 HITS.45006595._041542.pool.root.1
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc       529  5. Jun 05:34 boinc_task_state.xml
[2025-06-05 05:35:06] -rw------- 1 boinc boinc      1017  5. Jun 05:34 memory_monitor_summary.json
[2025-06-05 05:35:06] -rw------- 1 boinc boinc        95  5. Jun 05:34 pilot_heartbeat.json
[2025-06-05 05:35:06] -rw------- 1 boinc boinc    269711  5. Jun 05:34 log.45006595._041542.job.log.tgz.1
[2025-06-05 05:35:06] -rw------- 1 boinc boinc      7651  5. Jun 05:34 heartbeat.json
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc      8192  5. Jun 05:34 boinc_mmap_file
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc        27  5. Jun 05:34 wrapper_checkpoint.txt
[2025-06-05 05:35:06] -rw------- 1 boinc boinc      4478  5. Jun 05:35 pilotlog.txt
[2025-06-05 05:35:06] -rw------- 1 boinc boinc    639485  5. Jun 05:35 log.45006595._041542.job.log.1
[2025-06-05 05:35:06] -rw------- 1 boinc boinc       357  5. Jun 05:35 output.list
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc       620  5. Jun 05:35 runtime_log
[2025-06-05 05:35:06] -rw------- 1 boinc boinc    931840  5. Jun 05:35 result.tar.gz
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc      8641  5. Jun 05:35 runtime_log.err
[2025-06-05 05:35:06] -rw------- 1 boinc boinc       643  5. Jun 05:35 LGUNDmF8kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3XlKDmOE5tpn.diag
[2025-06-05 05:35:06] -rw-r--r-- 1 boinc boinc     20536  5. Jun 05:35 stderr.txt
[2025-06-05 05:35:06] HITS file was successfully produced:
[2025-06-05 05:35:06] -rw------- 1 boinc boinc 176778333  5. Jun 05:34 shared/HITS.pool.root.1
[2025-06-05 05:35:06]  *** Contents of shared directory: ***
[2025-06-05 05:35:06] insgesamt 385700
[2025-06-05 05:35:06] -rw-r--r-- 2 boinc boinc 216704702  5. Jun 03:45 ATLAS.root_0
[2025-06-05 05:35:06] -rw-r--r-- 2 boinc boinc    508880  5. Jun 03:45 input.tar.gz
[2025-06-05 05:35:06] -rw-r--r-- 2 boinc boinc     15093  5. Jun 03:45 start_atlas.sh
[2025-06-05 05:35:06] -rw------- 1 boinc boinc 176778333  5. Jun 05:34 HITS.pool.root.1
[2025-06-05 05:35:06] -rw------- 1 boinc boinc    931840  5. Jun 05:35 result.tar.gz
05:35:07 (312917): run_atlas exited; CPU time 25000.101935
05:35:07 (312917): called boinc_finish(0)

</stderr_txt>
]]>

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