Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:21:01 (3596668): wrapper (7.7.26015): starting
02:21:01 (3596668): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 02:21:01] Arguments: --nthreads 4
[2025-06-04 02:21:01] Threads: 4
[2025-06-04 02:21:01] Checking for CVMFS
[2025-06-04 02:21:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:21:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:21:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:21:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:21:01] 2.9.2.0 2910289 1717 92540 146761 0 187 29674647 36864000 0 130560 0 1844495 99.993 441240 55127 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 02:21:01] CVMFS is ok
[2025-06-04 02:21:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:21:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:21:01] Further information can be found at the LHC@home message board.
[2025-06-04 02:21:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:21:01] Checking for apptainer binary...
[2025-06-04 02:21:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:21:01] Running /usr/bin/apptainer --version
[2025-06-04 02:21:01] apptainer version 1.3.6-6.1
[2025-06-04 02:21:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:21:01] magicA244a
[2025-06-04 02:21:01] apptainer works
[2025-06-04 02:21:01] Set ATHENA_PROC_NUMBER=4
[2025-06-04 02:21:01] Set ATHENA_CORE_NUMBER=4
[2025-06-04 02:21:01] Starting ATLAS job with PandaID=6677784173
[2025-06-04 02:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:15:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:15:47]  filetype=log
[2025-06-04 03:15:47]  guid=05d312a3-85d5-406c-a184-fddee24a8ab5
[2025-06-04 03:15:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 03:15:47]  is_altstaged=None
[2025-06-04 03:15:47]  is_tar=False
[2025-06-04 03:15:47]  lfn=log.45006595._039266.job.log.tgz.1
[2025-06-04 03:15:47]  mtime=0
[2025-06-04 03:15:47]  protocol_id=None
[2025-06-04 03:15:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:15:47]  replicas=None
[2025-06-04 03:15:47]  scope=mc23_13p6TeV
[2025-06-04 03:15:47]  status=None
[2025-06-04 03:15:47]  status_code=0
[2025-06-04 03:15:47]  storage_token=
[2025-06-04 03:15:47]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677784173/log.45006595._039266.job.log.tgz.1
[2025-06-04 03:15:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/f0/log.45006595._039266.job.log.tgz.1
[2025-06-04 03:15:47]  workdir=None
[2025-06-04 03:15:47] ]
[2025-06-04 03:15:47] 2025-06-04 01:15:22,691 | INFO     | transferring file log.45006595._039266.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677784173/log.45006595._039266.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 03:15:47] 2025-06-04 01:15:22,691 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677784173/log.45006595._039266.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0392
[2025-06-04 03:15:47] 2025-06-04 01:15:22,705 | INFO     | adding to output.list: log.45006595._039266.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/f0/log.45006595._039266.job.log.tg
[2025-06-04 03:15:47] 2025-06-04 01:15:22,705 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:15:47] 2025-06-04 01:15:22,705 | INFO     | summary of transferred files:
[2025-06-04 03:15:47] 2025-06-04 01:15:22,705 | INFO     |  -- lfn=log.45006595._039266.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:15:47] 2025-06-04 01:15:22,706 | INFO     | stage-out finished correctly
[2025-06-04 03:15:47] 2025-06-04 01:15:24,230 | INFO     | 3258s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 03:15:47] 2025-06-04 01:15:24,732 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:15:47] 2025-06-04 01:15:25,580 | INFO     | job 6677784173 has state=finished
[2025-06-04 03:15:47] 2025-06-04 01:15:25,581 | INFO     | preparing for final server update for job 6677784173 in state='finished'
[2025-06-04 03:15:47] 2025-06-04 01:15:25,581 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:15:47] 2025-06-04 01:15:25,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:15:47] 2025-06-04 01:15:25,581 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:15:47] 2025-06-04 01:15:25,581 | INFO     | job 6677784173 has finished - writing final server update
[2025-06-04 03:15:47] 2025-06-04 01:15:25,582 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:15:47] 2025-06-04 01:15:25,583 | INFO     | executing command: lscpu
[2025-06-04 03:15:47] 2025-06-04 01:15:25,602 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:15:47] 2025-06-04 01:15:27,564 | WARNING  | process 3606975 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 03:15:47] 2025-06-04 01:15:27,565 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677784173/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:15:47] 2025-06-04 01:15:27,613 | INFO     | number of running child processes to parent process 3606975: 1
[2025-06-04 03:15:47] 2025-06-04 01:15:27,613 | INFO     | maximum number of monitored processes: 6
[2025-06-04 03:15:47] 2025-06-04 01:15:29,245 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 03:15:47] 2025-06-04 01:15:29,246 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677784173/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:15:47] 2025-06-04 01:15:29,246 | INFO     | extracted standard info from prmon json
[2025-06-04 03:15:47] 2025-06-04 01:15:29,246 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:15:47] 2025-06-04 01:15:29,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:15:47] 2025-06-04 01:15:29,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:15:47] 2025-06-04 01:15:29,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | sum of deviations: 699802980.0
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | mean x: 1748998164.5
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | mean y: 2398482.347826087
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | -- intersect: -40568863226.98549
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | intersect: -40568863226.98549
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | chi2: 0.00013199471979840667
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | -- intersect: -40568863226.98549
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | current memory leak: 23.20 B/s (using 46 data points, chi2=0.00)
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | ..............................
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | . Timing measurements:
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | . get job = 0 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | . initial setup = 1 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,247 | INFO     | . payload setup = 3 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,248 | INFO     | . stage-in = 0 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,248 | INFO     | . payload execution = 3235 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,248 | INFO     | . stage-out = 0 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,248 | INFO     | . log creation = 0 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,248 | INFO     | ..............................
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | 
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | job summary report
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | --------------------------------------------------
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | PanDA job id: 6677784173
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | task id: 45006595
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | errors: (none)
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | pilot state: finished 
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | transexitcode: 0
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | exeerrorcode: 0
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | exeerrordiag: 
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | exitcode: 0
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | exitmsg: OK
[2025-06-04 03:15:47] 2025-06-04 01:15:29,380 | INFO     | cpuconsumptiontime: 11952 s
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | nevents: 400
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | neventsw: 0
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | pid: 3606975
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | pgrp: 3606975
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | corecount: 4
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | event service: False
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | sizes: {0: 2405187, 2: 2405393, 10: 2405421, 3242: 2439959, 3244: 2439959, 3249: 2440129}
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | --------------------------------------------------
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | 
[2025-06-04 03:15:47] 2025-06-04 01:15:29,381 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | job 6677784173 has completed (purged errors)
[2025-06-04 03:15:47] 2025-06-04 01:15:29,398 | INFO     | overall cleanup function is called
[2025-06-04 03:15:47] 2025-06-04 01:15:30,405 | INFO     | --- collectZombieJob: --- 10, [3606975]
[2025-06-04 03:15:47] 2025-06-04 01:15:30,405 | INFO     | zombie collector waiting for pid 3606975
[2025-06-04 03:15:47] 2025-06-04 01:15:30,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:15:47] 2025-06-04 01:15:30,405 | INFO     | collected zombie processes
[2025-06-04 03:15:47] 2025-06-04 01:15:30,405 | INFO     | will attempt to kill all subprocesses of pid=3606975
[2025-06-04 03:15:47] 2025-06-04 01:15:30,448 | INFO     | process IDs to be killed: [3606975] (in reverse order)
[2025-06-04 03:15:47] 2025-06-04 01:15:30,475 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:15:47] 2025-06-04 01:15:30,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:15:47] 2025-06-04 01:15:30,476 | INFO     | did not find any defunct processes belonging to 3606975
[2025-06-04 03:15:47] 2025-06-04 01:15:30,477 | INFO     | did not find any defunct processes belonging to 3606975
[2025-06-04 03:15:47] 2025-06-04 01:15:30,477 | INFO     | ready for new job
[2025-06-04 03:15:47] 2025-06-04 01:15:30,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:15:47] 2025-06-04 01:15:30,478 | INFO     | **************************************
[2025-06-04 03:15:47] 2025-06-04 01:15:30,478 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:15:47] 2025-06-04 01:15:30,478 | INFO     | **************************************
[2025-06-04 03:15:47] 2025-06-04 01:15:30,478 | INFO     | 
[2025-06-04 03:15:47] 2025-06-04 01:15:30,479 | INFO     | architecture information:
[2025-06-04 03:15:47] 2025-06-04 01:15:30,479 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:15:47] 2025-06-04 01:15:30,488 | INFO     | cat /etc/os-release:
[2025-06-04 03:15:47] NAME="CentOS Linux"
[2025-06-04 03:15:47] VERSION="7 (Core)"
[2025-06-04 03:15:47] ID="centos"
[2025-06-04 03:15:47] ID_LIKE="rhel fedora"
[2025-06-04 03:15:47] VERSION_ID="7"
[2025-06-04 03:15:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:15:47] ANSI_COLOR="0;31"
[2025-06-04 03:15:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:15:47] HOME_URL="https://www.centos.org/"
[2025-06-04 03:15:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:15:47] 
[2025-06-04 03:15:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:15:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:15:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:15:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:15:47] 
[2025-06-04 03:15:47] 2025-06-04 01:15:30,488 | INFO     | **************************************
[2025-06-04 03:15:47] 2025-06-04 01:15:30,989 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | INFO     | sufficient remaining disk space (326672318464 B)
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | INFO     | update_server=False
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:15:47] 2025-06-04 01:15:31,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:15:47] 2025-06-04 01:15:31,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:15:47] 2025-06-04 01:15:31,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:15:47] 2025-06-04 01:15:31,123 | INFO     | aborting loop
[2025-06-04 03:15:47] 2025-06-04 01:15:31,251 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:15:47] 2025-06-04 01:15:31,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:15:47] 2025-06-04 01:15:31,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:15:47] 2025-06-04 01:15:31,523 | INFO     | all payload control threads have been joined
[2025-06-04 03:15:47] 2025-06-04 01:15:31,626 | INFO     | all data control threads have been joined
[2025-06-04 03:15:47] 2025-06-04 01:15:32,009 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:32,009 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:32,128 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:32,247 | INFO     | all job control threads have been joined
[2025-06-04 03:15:47] 2025-06-04 01:15:32,415 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:32,529 | INFO     | [payload] control thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:32,632 | INFO     | [data] control thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,007 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,047 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,134 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,199 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,253 | INFO     | [job] control thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,381 | INFO     | [job] validate thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,502 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:33,502 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:35,010 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:41,224 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:15:47] 2025-06-04 01:15:42,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:15:47] 2025-06-04 01:15:42,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019776452416)>', '<ExcThread(monitor, started 140018987284224)>']
[2025-06-04 03:15:47] 2025-06-04 01:15:42,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:15:47] 2025-06-04 01:15:42,311 | INFO     | [monitor] control thread has ended
[2025-06-04 03:15:47] 2025-06-04 01:15:47,293 | INFO     | all workflow threads have been joined
[2025-06-04 03:15:47] 2025-06-04 01:15:47,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:15:47] 2025-06-04 01:15:47,293 | INFO     | traces error code: 0
[2025-06-04 03:15:47] 2025-06-04 01:15:47,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:15:47] 2025-06-04 01:15:47,348 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:15:47] 2025-06-04 01:15:47,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:15:47] 2025-06-04 01:15:47,353 [wrapper] pilotpid: 3600362
[2025-06-04 03:15:47] 2025-06-04 01:15:47,356 [wrapper] Pilot exit status: 0
[2025-06-04 03:15:47] 2025-06-04 01:15:47,364 [wrapper] pandaids: 6677784173
[2025-06-04 03:15:47] 2025-06-04 01:15:47,381 [wrapper] cleanup supervisor_pilot 3616660 3600363
[2025-06-04 03:15:47] 2025-06-04 01:15:47,384 [wrapper] Test setup, not cleaning
[2025-06-04 03:15:47] 2025-06-04 01:15:47,386 [wrapper] apfmon messages muted
[2025-06-04 03:15:47] 2025-06-04 01:15:47,389 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:15:47] 2025-06-04 01:15:47,391 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:15:47]  *** Error codes and diagnostics ***
[2025-06-04 03:15:47]     "exeErrorCode": 0,
[2025-06-04 03:15:47]     "exeErrorDiag": "",
[2025-06-04 03:15:47]     "pilotErrorCode": 0,
[2025-06-04 03:15:47]     "pilotErrorDiag": "",
[2025-06-04 03:15:47]  *** Listing of results directory ***
[2025-06-04 03:15:47] total 388308
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 03:15:47] -rwx------ 1 boinc boinc     37140 Jun  3 18:51 runpilot2-wrapper.sh
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:51 queuedata.json
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:15:47] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:21 run_atlas
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:21 job.xml
[2025-06-04 03:15:47] -rw-r--r-- 2 boinc boinc 218107370 Jun  4 02:21 EVNT.45006593._001575.pool.root.1
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc      6920 Jun  4 02:21 init_data.xml
[2025-06-04 03:15:47] drwxrwx--x 2 boinc boinc      4096 Jun  4 02:21 shared
[2025-06-04 03:15:47] -rw-r--r-- 2 boinc boinc    508877 Jun  4 02:21 input.tar.gz
[2025-06-04 03:15:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:21 start_atlas.sh
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:21 boinc_lockfile
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc      2525 Jun  4 02:21 pandaJob.out
[2025-06-04 03:15:47] -rw------- 1 boinc boinc    986077 Jun  4 02:21 agis_schedconf.cvmfs.json
[2025-06-04 03:15:47] -rw------- 1 boinc boinc   1603667 Jun  4 02:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:15:47] drwx------ 4 boinc boinc      4096 Jun  4 02:21 pilot3
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc       529 Jun  4 03:15 boinc_task_state.xml
[2025-06-04 03:15:47] -rw------- 1 boinc boinc 174576006 Jun  4 03:15 HITS.45006595._039266.pool.root.1
[2025-06-04 03:15:47] -rw------- 1 boinc boinc      1014 Jun  4 03:15 memory_monitor_summary.json
[2025-06-04 03:15:47] -rw------- 1 boinc boinc    220009 Jun  4 03:15 log.45006595._039266.job.log.tgz.1
[2025-06-04 03:15:47] -rw------- 1 boinc boinc        95 Jun  4 03:15 pilot_heartbeat.json
[2025-06-04 03:15:47] -rw------- 1 boinc boinc      7648 Jun  4 03:15 heartbeat.json
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc        27 Jun  4 03:15 wrapper_checkpoint.txt
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc      8192 Jun  4 03:15 boinc_mmap_file
[2025-06-04 03:15:47] -rw------- 1 boinc boinc      4429 Jun  4 03:15 pilotlog.txt
[2025-06-04 03:15:47] -rw------- 1 boinc boinc    334292 Jun  4 03:15 log.45006595._039266.job.log.1
[2025-06-04 03:15:47] -rw------- 1 boinc boinc       357 Jun  4 03:15 output.list
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc       620 Jun  4 03:15 runtime_log
[2025-06-04 03:15:47] -rw------- 1 boinc boinc    573440 Jun  4 03:15 result.tar.gz
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc      8753 Jun  4 03:15 runtime_log.err
[2025-06-04 03:15:47] -rw------- 1 boinc boinc       661 Jun  4 03:15 YQ3LDmU2jg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmELZKDmHIeEMo.diag
[2025-06-04 03:15:47] -rw-r--r-- 1 boinc boinc     21171 Jun  4 03:15 stderr.txt
[2025-06-04 03:15:47] HITS file was successfully produced:
[2025-06-04 03:15:47] -rw------- 1 boinc boinc 174576006 Jun  4 03:15 shared/HITS.pool.root.1
[2025-06-04 03:15:47]  *** Contents of shared directory: ***
[2025-06-04 03:15:47] total 384568
[2025-06-04 03:15:47] -rw-r--r-- 2 boinc boinc 218107370 Jun  4 02:21 ATLAS.root_0
[2025-06-04 03:15:47] -rw-r--r-- 2 boinc boinc    508877 Jun  4 02:21 input.tar.gz
[2025-06-04 03:15:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:21 start_atlas.sh
[2025-06-04 03:15:47] -rw------- 1 boinc boinc 174576006 Jun  4 03:15 HITS.pool.root.1
[2025-06-04 03:15:47] -rw------- 1 boinc boinc    573440 Jun  4 03:15 result.tar.gz
03:15:49 (3596668): run_atlas exited; CPU time 11961.319867
03:15:49 (3596668): called boinc_finish(0)

</stderr_txt>
]]>

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