Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:45:26 (1186963): wrapper (7.7.26015): starting
04:45:26 (1186963): wrapper: running run_atlas (--nthreads 3)
[2025-06-06 04:45:26] Arguments: --nthreads 3
[2025-06-06 04:45:26] Threads: 3
[2025-06-06 04:45:26] Checking for CVMFS
[2025-06-06 04:45:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 04:45:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 04:45:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 04:45:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 04:45:27] 2.12.7.0 68668 8326 47704 146840 2 55 7148981 10240001 0 130560 0 2977699 99.982 1867835 1386 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-06 04:45:27] CVMFS is ok
[2025-06-06 04:45:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 04:45:27] Checking for apptainer binary...
[2025-06-06 04:45:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 04:45:27] Running /usr/bin/apptainer --version
[2025-06-06 04:45:27] apptainer version 1.3.4
[2025-06-06 04:45:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 04:45:27] ahanlst03
[2025-06-06 04:45:27] apptainer works
[2025-06-06 04:45:27] Set ATHENA_PROC_NUMBER=3
[2025-06-06 04:45:27] Set ATHENA_CORE_NUMBER=3
[2025-06-06 04:45:27] Starting ATLAS job with PandaID=6677919085
[2025-06-06 04:45:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:44:08]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:44:08] 2025-06-06 07:43:51,639 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 09:44:08] 2025-06-06 07:43:51,640 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677919085/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:44:08] 2025-06-06 07:43:51,641 | INFO     | extracted standard info from prmon json
[2025-06-06 09:44:08] 2025-06-06 07:43:51,641 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:44:08] 2025-06-06 07:43:51,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:44:08] 2025-06-06 07:43:51,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:44:08] 2025-06-06 07:43:51,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:44:08] 2025-06-06 07:43:51,647 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:44:08] 2025-06-06 07:43:51,648 | INFO     | sum of square deviations: 7799669962.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,651 | INFO     | sum of deviations: -59408766261.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,651 | INFO     | mean x: 1749186874.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,651 | INFO     | mean y: 2322983.14334471
[2025-06-06 09:44:08] 2025-06-06 07:43:51,651 | INFO     | -- intersect: 13325583409.61769
[2025-06-06 09:44:08] 2025-06-06 07:43:51,651 | INFO     | intersect: 13325583409.61769
[2025-06-06 09:44:08] 2025-06-06 07:43:51,652 | INFO     | chi2: 2.62802544122409
[2025-06-06 09:44:08] 2025-06-06 07:43:51,652 | INFO     | sum of square deviations: 7407141672.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,655 | INFO     | sum of deviations: -39766390683.99999
[2025-06-06 09:44:08] 2025-06-06 07:43:51,655 | INFO     | mean x: 1749186721.5
[2025-06-06 09:44:08] 2025-06-06 07:43:51,655 | INFO     | mean y: 2330512.284722222
[2025-06-06 09:44:08] 2025-06-06 07:43:51,655 | INFO     | -- intersect: 9393111143.547108
[2025-06-06 09:44:08] 2025-06-06 07:43:51,655 | INFO     | intersect: 9393111143.547108
[2025-06-06 09:44:08] 2025-06-06 07:43:51,656 | INFO     | chi2: 1.7645222089345232
[2025-06-06 09:44:08] 2025-06-06 07:43:51,656 | INFO     | current chi2=1.7645222089345232 (change=32.85749136002891 %)
[2025-06-06 09:44:08] 2025-06-06 07:43:51,656 | INFO     | sum of square deviations: 7028008982.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,659 | INFO     | sum of deviations: -39435001778.99999
[2025-06-06 09:44:08] 2025-06-06 07:43:51,659 | INFO     | mean x: 1749186569.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,659 | INFO     | mean y: 2330645.593639576
[2025-06-06 09:44:08] 2025-06-06 07:43:51,660 | INFO     | -- intersect: 9817226391.598804
[2025-06-06 09:44:08] 2025-06-06 07:43:51,660 | INFO     | intersect: 9817226391.598804
[2025-06-06 09:44:08] 2025-06-06 07:43:51,660 | INFO     | chi2: 1.7611563273100355
[2025-06-06 09:44:08] 2025-06-06 07:43:51,660 | INFO     | current chi2=1.7611563273100355 (change=0.19075314594765738 %)
[2025-06-06 09:44:08] 2025-06-06 07:43:51,660 | INFO     | right removable region: 282
[2025-06-06 09:44:08] 2025-06-06 07:43:51,661 | INFO     | sum of square deviations: 7407141672.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,664 | INFO     | sum of deviations: -89231250881.49998
[2025-06-06 09:44:08] 2025-06-06 07:43:51,664 | INFO     | mean x: 1749187026.5
[2025-06-06 09:44:08] 2025-06-06 07:43:51,664 | INFO     | mean y: 2334423.4756944445
[2025-06-06 09:44:08] 2025-06-06 07:43:51,664 | INFO     | -- intersect: 21074180124.80717
[2025-06-06 09:44:08] 2025-06-06 07:43:51,664 | INFO     | intersect: 21074180124.80717
[2025-06-06 09:44:08] 2025-06-06 07:43:51,664 | INFO     | chi2: 1.3697256990141837
[2025-06-06 09:44:08] 2025-06-06 07:43:51,665 | INFO     | current chi2=1.3697256990141837 (change=47.8800441758209 %)
[2025-06-06 09:44:08] 2025-06-06 07:43:51,665 | INFO     | sum of square deviations: 7028008982.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,668 | INFO     | sum of deviations: -75693875077.99998
[2025-06-06 09:44:08] 2025-06-06 07:43:51,668 | INFO     | mean x: 1749187179.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,668 | INFO     | mean y: 2328970.3144876324
[2025-06-06 09:44:08] 2025-06-06 07:43:51,668 | INFO     | -- intersect: 18841627006.838425
[2025-06-06 09:44:08] 2025-06-06 07:43:51,668 | INFO     | intersect: 18841627006.838425
[2025-06-06 09:44:08] 2025-06-06 07:43:51,669 | INFO     | chi2: 1.327184402556421
[2025-06-06 09:44:08] 2025-06-06 07:43:51,669 | INFO     | current chi2=1.327184402556421 (change=3.105825968541034 %)
[2025-06-06 09:44:08] 2025-06-06 07:43:51,669 | INFO     | left removable region: 20
[2025-06-06 09:44:08] 2025-06-06 07:43:51,669 | INFO     | sum of square deviations: 5576683165.5
[2025-06-06 09:44:08] 2025-06-06 07:43:51,671 | INFO     | sum of deviations: -25475565481.0
[2025-06-06 09:44:08] 2025-06-06 07:43:51,672 | INFO     | mean x: 1749187148.5
[2025-06-06 09:44:08] 2025-06-06 07:43:51,672 | INFO     | mean y: 2323250.3740458013
[2025-06-06 09:44:08] 2025-06-06 07:43:51,672 | INFO     | -- intersect: 7993010620.926873
[2025-06-06 09:44:08] 2025-06-06 07:43:51,672 | INFO     | intersect: 7993010620.926873
[2025-06-06 09:44:08] 2025-06-06 07:43:51,672 | INFO     | chi2: 0.27635140358132215
[2025-06-06 09:44:08] 2025-06-06 07:43:51,673 | INFO     | -- intersect: 7993010620.926873
[2025-06-06 09:44:08] 2025-06-06 07:43:51,673 | INFO     | current memory leak: -4.57 B/s (using 262 data points, chi2=0.28)
[2025-06-06 09:44:08] 2025-06-06 07:43:51,673 | INFO     | ..............................
[2025-06-06 09:44:08] 2025-06-06 07:43:51,673 | INFO     | . Timing measurements:
[2025-06-06 09:44:08] 2025-06-06 07:43:51,673 | INFO     | . get job = 0 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | . initial setup = 2 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | . payload setup = 7 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | . stage-in = 0 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | . payload execution = 17842 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | . stage-out = 6 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | . log creation = 0 s
[2025-06-06 09:44:08] 2025-06-06 07:43:51,674 | INFO     | ..............................
[2025-06-06 09:44:08] 2025-06-06 07:43:52,190 | INFO     | 
[2025-06-06 09:44:08] 2025-06-06 07:43:52,190 | INFO     | job summary report
[2025-06-06 09:44:08] 2025-06-06 07:43:52,191 | INFO     | --------------------------------------------------
[2025-06-06 09:44:08] 2025-06-06 07:43:52,191 | INFO     | PanDA job id: 6677919085
[2025-06-06 09:44:08] 2025-06-06 07:43:52,191 | INFO     | task id: 45006595
[2025-06-06 09:44:08] 2025-06-06 07:43:52,192 | INFO     | errors: (none)
[2025-06-06 09:44:08] 2025-06-06 07:43:52,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:44:08] 2025-06-06 07:43:52,193 | INFO     | pilot state: finished 
[2025-06-06 09:44:08] 2025-06-06 07:43:52,193 | INFO     | transexitcode: 0
[2025-06-06 09:44:08] 2025-06-06 07:43:52,193 | INFO     | exeerrorcode: 0
[2025-06-06 09:44:08] 2025-06-06 07:43:52,194 | INFO     | exeerrordiag: 
[2025-06-06 09:44:08] 2025-06-06 07:43:52,194 | INFO     | exitcode: 0
[2025-06-06 09:44:08] 2025-06-06 07:43:52,194 | INFO     | exitmsg: OK
[2025-06-06 09:44:08] 2025-06-06 07:43:52,195 | INFO     | cpuconsumptiontime: 52661 s
[2025-06-06 09:44:08] 2025-06-06 07:43:52,195 | INFO     | nevents: 400
[2025-06-06 09:44:08] 2025-06-06 07:43:52,196 | INFO     | neventsw: 0
[2025-06-06 09:44:08] 2025-06-06 07:43:52,196 | INFO     | pid: 1196968
[2025-06-06 09:44:08] 2025-06-06 07:43:52,196 | INFO     | pgrp: 1196968
[2025-06-06 09:44:08] 2025-06-06 07:43:52,197 | INFO     | corecount: 3
[2025-06-06 09:44:08] 2025-06-06 07:43:52,197 | INFO     | event service: False
[2025-06-06 09:44:08] 2025-06-06 07:43:52,197 | INFO     | sizes: {0: 2397179, 1: 2397378, 2: 2397378, 5: 2397612, 12: 2397668, 17854: 2429790, 17860: 2438745, 17864: 2438801, 17877: 2438971}
[2025-06-06 09:44:08] 2025-06-06 07:43:52,198 | INFO     | --------------------------------------------------
[2025-06-06 09:44:08] 2025-06-06 07:43:52,198 | INFO     | 
[2025-06-06 09:44:08] 2025-06-06 07:43:52,199 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 09:44:08] 2025-06-06 07:43:52,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:44:08] 2025-06-06 07:43:52,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:44:08] 2025-06-06 07:43:52,235 | INFO     | job 6677919085 has completed (purged errors)
[2025-06-06 09:44:08] 2025-06-06 07:43:52,235 | INFO     | overall cleanup function is called
[2025-06-06 09:44:08] 2025-06-06 07:43:53,244 | INFO     | --- collectZombieJob: --- 10, [1196968]
[2025-06-06 09:44:08] 2025-06-06 07:43:53,245 | INFO     | zombie collector waiting for pid 1196968
[2025-06-06 09:44:08] 2025-06-06 07:43:53,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:44:08] 2025-06-06 07:43:53,245 | INFO     | collected zombie processes
[2025-06-06 09:44:08] 2025-06-06 07:43:53,246 | INFO     | will attempt to kill all subprocesses of pid=1196968
[2025-06-06 09:44:08] 2025-06-06 07:43:53,377 | INFO     | process IDs to be killed: [1196968] (in reverse order)
[2025-06-06 09:44:08] 2025-06-06 07:43:53,439 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:44:08] 2025-06-06 07:43:53,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:44:08] 2025-06-06 07:43:53,444 | INFO     | did not find any defunct processes belonging to 1196968
[2025-06-06 09:44:08] 2025-06-06 07:43:53,448 | INFO     | did not find any defunct processes belonging to 1196968
[2025-06-06 09:44:08] 2025-06-06 07:43:53,448 | INFO     | ready for new job
[2025-06-06 09:44:08] 2025-06-06 07:43:53,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:44:08] 2025-06-06 07:43:53,452 | INFO     | **************************************
[2025-06-06 09:44:08] 2025-06-06 07:43:53,452 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:44:08] 2025-06-06 07:43:53,452 | INFO     | **************************************
[2025-06-06 09:44:08] 2025-06-06 07:43:53,452 | INFO     | 
[2025-06-06 09:44:08] 2025-06-06 07:43:53,453 | INFO     | architecture information:
[2025-06-06 09:44:08] 2025-06-06 07:43:53,453 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:44:08] 2025-06-06 07:43:53,475 | INFO     | cat /etc/os-release:
[2025-06-06 09:44:08] NAME="CentOS Linux"
[2025-06-06 09:44:08] VERSION="7 (Core)"
[2025-06-06 09:44:08] ID="centos"
[2025-06-06 09:44:08] ID_LIKE="rhel fedora"
[2025-06-06 09:44:08] VERSION_ID="7"
[2025-06-06 09:44:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:44:08] ANSI_COLOR="0;31"
[2025-06-06 09:44:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:44:08] HOME_URL="https://www.centos.org/"
[2025-06-06 09:44:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:44:08] 
[2025-06-06 09:44:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:44:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:44:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:44:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:44:08] 
[2025-06-06 09:44:08] 2025-06-06 07:43:53,476 | INFO     | **************************************
[2025-06-06 09:44:08] 2025-06-06 07:43:53,979 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 09:44:08] 2025-06-06 07:43:54,005 | INFO     | sufficient remaining disk space (34102837248 B)
[2025-06-06 09:44:08] 2025-06-06 07:43:54,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:44:08] 2025-06-06 07:43:54,006 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:44:08] 2025-06-06 07:43:54,006 | INFO     | update_server=False
[2025-06-06 09:44:08] 2025-06-06 07:43:54,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:44:08] 2025-06-06 07:43:54,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:44:08] 2025-06-06 07:43:54,007 | INFO     | aborting loop
[2025-06-06 09:44:08] 2025-06-06 07:43:54,225 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:44:08] 2025-06-06 07:43:54,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:44:08] 2025-06-06 07:43:54,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:44:08] 2025-06-06 07:43:54,389 | INFO     | all data control threads have been joined
[2025-06-06 09:44:08] 2025-06-06 07:43:54,878 | INFO     | all payload control threads have been joined
[2025-06-06 09:44:08] 2025-06-06 07:43:54,985 | INFO     | all job control threads have been joined
[2025-06-06 09:44:08] 2025-06-06 07:43:55,010 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,012 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,031 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,147 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,240 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:44:08] 2025-06-06 07:43:55,395 | INFO     | [data] control thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,503 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,884 | INFO     | [payload] control thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:55,990 | INFO     | [job] control thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:56,092 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:56,209 | INFO     | [job] validate thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:56,431 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:56,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:44:08] 2025-06-06 07:43:57,291 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:43:57,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:44:08] 2025-06-06 07:43:57,813 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:44:01,490 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:44:08] 2025-06-06 07:44:02,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134488056772416)>', '<ExcThread(monitor, started 134487279126272)>']
[2025-06-06 09:44:08] 2025-06-06 07:44:03,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:44:08] 2025-06-06 07:44:03,273 | INFO     | [monitor] control thread has ended
[2025-06-06 09:44:08] 2025-06-06 07:44:07,760 | INFO     | all workflow threads have been joined
[2025-06-06 09:44:08] 2025-06-06 07:44:07,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:44:08] 2025-06-06 07:44:07,766 | INFO     | traces error code: 0
[2025-06-06 09:44:08] 2025-06-06 07:44:07,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:44:08] 2025-06-06 07:44:07,959 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:44:08] 2025-06-06 07:44:07,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:44:08] 2025-06-06 07:44:07,968 [wrapper] pilotpid: 1190549
[2025-06-06 09:44:08] 2025-06-06 07:44:07,972 [wrapper] Pilot exit status: 0
[2025-06-06 09:44:08] 2025-06-06 07:44:07,985 [wrapper] pandaids: 6677919085
[2025-06-06 09:44:08] 2025-06-06 07:44:08,013 [wrapper] cleanup supervisor_pilot 1225841 1190550
[2025-06-06 09:44:08] 2025-06-06 07:44:08,017 [wrapper] Test setup, not cleaning
[2025-06-06 09:44:08] 2025-06-06 07:44:08,021 [wrapper] apfmon messages muted
[2025-06-06 09:44:08] 2025-06-06 07:44:08,025 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:44:08] 2025-06-06 07:44:08,029 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:44:08]  *** Error codes and diagnostics ***
[2025-06-06 09:44:08]     "exeErrorCode": 0,
[2025-06-06 09:44:08]     "exeErrorDiag": "",
[2025-06-06 09:44:08]     "pilotErrorCode": 0,
[2025-06-06 09:44:08]     "pilotErrorDiag": "",
[2025-06-06 09:44:08]  *** Listing of results directory ***
[2025-06-06 09:44:08] total 392920
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:58 queuedata.json
[2025-06-06 09:44:08] -rwx------ 1 boinc boinc     37140 Jun  3 19:58 runpilot2-wrapper.sh
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc       100 Jun  6 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:44:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 04:45 run_atlas
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc       105 Jun  6 04:45 job.xml
[2025-06-06 09:44:08] -rw-r--r-- 2 boinc boinc 214279663 Jun  6 04:45 EVNT.45006593._001660.pool.root.1
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc      9392 Jun  6 04:45 init_data.xml
[2025-06-06 09:44:08] -rw-r--r-- 2 boinc boinc     15093 Jun  6 04:45 start_atlas.sh
[2025-06-06 09:44:08] drwxrwx--x 2 boinc boinc      4096 Jun  6 04:45 shared
[2025-06-06 09:44:08] -rw-r--r-- 2 boinc boinc    508880 Jun  6 04:45 input.tar.gz
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc         0 Jun  6 04:45 boinc_lockfile
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc      2526 Jun  6 04:45 pandaJob.out
[2025-06-06 09:44:08] -rw------- 1 boinc boinc    987721 Jun  6 04:45 agis_schedconf.cvmfs.json
[2025-06-06 09:44:08] drwx------ 4 boinc boinc      4096 Jun  6 04:45 pilot3
[2025-06-06 09:44:08] -rw------- 1 boinc boinc 180270937 Jun  6 09:42 HITS.45006595._041471.pool.root.1
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc       530 Jun  6 09:43 boinc_task_state.xml
[2025-06-06 09:44:08] -rw------- 1 boinc boinc      1026 Jun  6 09:43 memory_monitor_summary.json
[2025-06-06 09:44:08] -rw------- 1 boinc boinc        95 Jun  6 09:43 pilot_heartbeat.json
[2025-06-06 09:44:08] -rw------- 1 boinc boinc   1598969 Jun  6 09:43 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:44:08] -rw------- 1 boinc boinc    361430 Jun  6 09:43 log.45006595._041471.job.log.tgz.1
[2025-06-06 09:44:08] -rw------- 1 boinc boinc      7648 Jun  6 09:43 heartbeat.json
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:44 boinc_mmap_file
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc        28 Jun  6 09:44 wrapper_checkpoint.txt
[2025-06-06 09:44:08] -rw------- 1 boinc boinc      4360 Jun  6 09:44 pilotlog.txt
[2025-06-06 09:44:08] -rw------- 1 boinc boinc   1617730 Jun  6 09:44 log.45006595._041471.job.log.1
[2025-06-06 09:44:08] -rw------- 1 boinc boinc       357 Jun  6 09:44 output.list
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:44 runtime_log
[2025-06-06 09:44:08] -rw------- 1 boinc boinc   1996800 Jun  6 09:44 result.tar.gz
[2025-06-06 09:44:08] -rw------- 1 boinc boinc       652 Jun  6 09:44 x71LDm94kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVVlKDmN1eUon.diag
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc      8766 Jun  6 09:44 runtime_log.err
[2025-06-06 09:44:08] -rw-r--r-- 1 boinc boinc     20522 Jun  6 09:44 stderr.txt
[2025-06-06 09:44:08] HITS file was successfully produced:
[2025-06-06 09:44:08] -rw------- 1 boinc boinc 180270937 Jun  6 09:42 shared/HITS.pool.root.1
[2025-06-06 09:44:08]  *** Contents of shared directory: ***
[2025-06-06 09:44:08] total 387784
[2025-06-06 09:44:08] -rw-r--r-- 2 boinc boinc 214279663 Jun  6 04:45 ATLAS.root_0
[2025-06-06 09:44:08] -rw-r--r-- 2 boinc boinc     15093 Jun  6 04:45 start_atlas.sh
[2025-06-06 09:44:08] -rw-r--r-- 2 boinc boinc    508880 Jun  6 04:45 input.tar.gz
[2025-06-06 09:44:08] -rw------- 1 boinc boinc 180270937 Jun  6 09:42 HITS.pool.root.1
[2025-06-06 09:44:08] -rw------- 1 boinc boinc   1996800 Jun  6 09:44 result.tar.gz
09:44:10 (1186963): run_atlas exited; CPU time 52745.135462
09:44:10 (1186963): called boinc_finish(0)

</stderr_txt>
]]>

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