Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:40:20 (1261264): wrapper (7.7.26015): starting
05:40:20 (1261264): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 05:40:20] Arguments: --nthreads 2
[2025-06-04 05:40:20] Threads: 2
[2025-06-04 05:40:20] Checking for CVMFS
[2025-06-04 05:40:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:40:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:40:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:40:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:40:20] 2.9.2.0 1041389 928 54232 146766 0 56 31349692 36864001 0 130560 0 590425 99.991 225036 31910 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 05:40:20] CVMFS is ok
[2025-06-04 05:40:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:40:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:40:20] Further information can be found at the LHC@home message board.
[2025-06-04 05:40:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:40:20] Checking for apptainer binary...
[2025-06-04 05:40:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:40:20] Running /usr/bin/apptainer --version
[2025-06-04 05:40:20] apptainer version 1.3.6-6.1
[2025-06-04 05:40:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:40:20] thA365a
[2025-06-04 05:40:20] apptainer works
[2025-06-04 05:40:20] Set ATHENA_PROC_NUMBER=2
[2025-06-04 05:40:20] Set ATHENA_CORE_NUMBER=2
[2025-06-04 05:40:20] Starting ATLAS job with PandaID=6677919195
[2025-06-04 05:40:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:26:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | mean x: 1749011574.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | mean y: 2289001.349514563
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | -- intersect: -25532056842.504513
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | intersect: -25532056842.504513
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | chi2: 1.585559496342224
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | sum of deviations: 4811717697.999999
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | mean x: 1749011421.5
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | mean y: 2288565.0204081633
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | -- intersect: -28836788429.043415
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | intersect: -28836788429.043415
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | chi2: 1.5890979845881485
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | current chi2=1.5890979845881485 (change=-0.2231696920921396 %)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | right removable region: 97
[2025-06-04 07:26:12] 2025-06-04 05:25:52,951 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | sum of deviations: -6409353783.500001
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | mean x: 1749011726.5
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | mean y: 2324610.826530612
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | -- intersect: 38416855778.05051
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | intersect: 38416855778.05051
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | chi2: 0.14619546369486675
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | current chi2=0.14619546369486675 (change=90.77956620157556 %)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | sum of deviations: -1162512685.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | mean x: 1749011879.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | mean y: 2305726.6666666665
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | -- intersect: 8155229956.110343
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | intersect: 8155229956.110343
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | chi2: 0.05800838963958163
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | current chi2=0.05800838963958163 (change=60.32134775354289 %)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,952 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | sum of deviations: 576760825.5
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | mean x: 1749012031.5
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | mean y: 2299067.352272727
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | -- intersect: -4772094280.7133255
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | intersect: -4772094280.7133255
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | chi2: 0.0035115004783520722
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | current chi2=0.0035115004783520722 (change=93.94656445357342 %)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | sum of deviations: 176357404.9999994
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | mean x: 1749012184.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | mean y: 2300854.795180723
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | -- intersect: -1737649591.9532464
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | intersect: -1737649591.9532464
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | chi2: 0.0028593417893797504
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | current chi2=0.0028593417893797504 (change=18.572080311331078 %)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | left removable region: 40
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,953 | INFO     | sum of deviations: -305956906.99999994
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | mean x: 1749012611.0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | mean y: 2304667.7719298247
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | -- intersect: 9323763858.24609
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | intersect: 9323763858.24609
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | chi2: 0.0017373828929224617
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | -- intersect: 9323763858.24609
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | current memory leak: -5.33 B/s (using 57 data points, chi2=0.00)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | ..............................
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . Timing measurements:
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . get job = 0 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . initial setup = 1 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . payload setup = 9 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . stage-in = 0 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . payload execution = 6276 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . stage-out = 0 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | . log creation = 0 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,954 | INFO     | ..............................
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | 
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | job summary report
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | --------------------------------------------------
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | PanDA job id: 6677919195
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | task id: 45006595
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | errors: (none)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:26:12] 2025-06-04 05:25:52,985 | INFO     | pilot state: finished 
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | transexitcode: 0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | exeerrorcode: 0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | exeerrordiag: 
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | exitcode: 0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | exitmsg: OK
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | cpuconsumptiontime: 12195 s
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | nevents: 400
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | neventsw: 0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | pid: 1271345
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | pgrp: 1271345
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | corecount: 2
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | event service: False
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | sizes: {0: 2405188, 8: 2405394, 11: 2405422, 6289: 2432376, 6291: 2441323, 6293: 2441379, 6302: 2441677}
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | --------------------------------------------------
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | 
[2025-06-04 07:26:12] 2025-06-04 05:25:52,986 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | job 6677919195 has completed (purged errors)
[2025-06-04 07:26:12] 2025-06-04 05:25:52,997 | INFO     | overall cleanup function is called
[2025-06-04 07:26:12] 2025-06-04 05:25:53,207 | INFO     | PID=1264882 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:26:12] 2025-06-04 05:25:54,004 | INFO     | --- collectZombieJob: --- 10, [1271345]
[2025-06-04 07:26:12] 2025-06-04 05:25:54,004 | INFO     | zombie collector waiting for pid 1271345
[2025-06-04 07:26:12] 2025-06-04 05:25:54,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:26:12] 2025-06-04 05:25:54,004 | INFO     | collected zombie processes
[2025-06-04 07:26:12] 2025-06-04 05:25:54,005 | INFO     | will attempt to kill all subprocesses of pid=1271345
[2025-06-04 07:26:12] 2025-06-04 05:25:54,038 | INFO     | process IDs to be killed: [1271345] (in reverse order)
[2025-06-04 07:26:12] 2025-06-04 05:25:54,060 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:26:12] 2025-06-04 05:25:54,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:26:12] 2025-06-04 05:25:54,061 | INFO     | did not find any defunct processes belonging to 1271345
[2025-06-04 07:26:12] 2025-06-04 05:25:54,061 | INFO     | did not find any defunct processes belonging to 1271345
[2025-06-04 07:26:12] 2025-06-04 05:25:54,061 | INFO     | ready for new job
[2025-06-04 07:26:12] 2025-06-04 05:25:54,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:26:12] 2025-06-04 05:25:54,062 | INFO     | **************************************
[2025-06-04 07:26:12] 2025-06-04 05:25:54,062 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:26:12] 2025-06-04 05:25:54,062 | INFO     | **************************************
[2025-06-04 07:26:12] 2025-06-04 05:25:54,062 | INFO     | 
[2025-06-04 07:26:12] 2025-06-04 05:25:54,062 | INFO     | architecture information:
[2025-06-04 07:26:12] 2025-06-04 05:25:54,062 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:26:12] 2025-06-04 05:25:54,071 | INFO     | cat /etc/os-release:
[2025-06-04 07:26:12] NAME="CentOS Linux"
[2025-06-04 07:26:12] VERSION="7 (Core)"
[2025-06-04 07:26:12] ID="centos"
[2025-06-04 07:26:12] ID_LIKE="rhel fedora"
[2025-06-04 07:26:12] VERSION_ID="7"
[2025-06-04 07:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:26:12] ANSI_COLOR="0;31"
[2025-06-04 07:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:26:12] HOME_URL="https://www.centos.org/"
[2025-06-04 07:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:26:12] 
[2025-06-04 07:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:26:12] 
[2025-06-04 07:26:12] 2025-06-04 05:25:54,071 | INFO     | **************************************
[2025-06-04 07:26:12] 2025-06-04 05:25:54,574 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:26:12] 2025-06-04 05:25:54,605 | INFO     | sufficient remaining disk space (488488566784 B)
[2025-06-04 07:26:12] 2025-06-04 05:25:54,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:26:12] 2025-06-04 05:25:54,606 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:26:12] 2025-06-04 05:25:54,606 | INFO     | update_server=False
[2025-06-04 07:26:12] 2025-06-04 05:25:54,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:26:12] 2025-06-04 05:25:54,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:26:12] 2025-06-04 05:25:54,814 | INFO     | all data control threads have been joined
[2025-06-04 07:26:12] 2025-06-04 05:25:55,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:26:12] 2025-06-04 05:25:55,087 | INFO     | all job control threads have been joined
[2025-06-04 07:26:12] 2025-06-04 05:25:55,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:26:12] 2025-06-04 05:25:55,142 | INFO     | aborting loop
[2025-06-04 07:26:12] 2025-06-04 05:25:55,213 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:26:12] 2025-06-04 05:25:55,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:26:12] 2025-06-04 05:25:55,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:26:12] 2025-06-04 05:25:55,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:26:12] 2025-06-04 05:25:55,612 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:55,613 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:55,637 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:55,694 | INFO     | all payload control threads have been joined
[2025-06-04 07:26:12] 2025-06-04 05:25:55,820 | INFO     | [data] control thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,094 | INFO     | [job] control thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,142 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,147 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,160 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,251 | INFO     | [job] validate thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,424 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,425 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,495 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:56,700 | INFO     | [payload] control thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:57,089 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:25:59,242 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:26:05,560 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:26:12] 2025-06-04 05:26:06,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:26:12] 2025-06-04 05:26:07,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697728845632)>', '<ExcThread(monitor, started 139697099634432)>']
[2025-06-04 07:26:12] 2025-06-04 05:26:08,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:26:12] 2025-06-04 05:26:08,279 | INFO     | [monitor] control thread has ended
[2025-06-04 07:26:12] 2025-06-04 05:26:12,488 | INFO     | all workflow threads have been joined
[2025-06-04 07:26:12] 2025-06-04 05:26:12,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:26:12] 2025-06-04 05:26:12,489 | INFO     | traces error code: 0
[2025-06-04 07:26:12] 2025-06-04 05:26:12,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:26:12] 2025-06-04 05:26:12,531 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:26:12] 2025-06-04 05:26:12,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:26:12] 2025-06-04 05:26:12,536 [wrapper] pilotpid: 1264882
[2025-06-04 07:26:12] 2025-06-04 05:26:12,539 [wrapper] Pilot exit status: 0
[2025-06-04 07:26:12] 2025-06-04 05:26:12,545 [wrapper] pandaids: 6677919195
[2025-06-04 07:26:12] 2025-06-04 05:26:12,558 [wrapper] cleanup supervisor_pilot 1285393 1264883
[2025-06-04 07:26:12] 2025-06-04 05:26:12,560 [wrapper] Test setup, not cleaning
[2025-06-04 07:26:12] 2025-06-04 05:26:12,562 [wrapper] apfmon messages muted
[2025-06-04 07:26:12] 2025-06-04 05:26:12,565 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:26:12] 2025-06-04 05:26:12,567 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:26:12]  *** Error codes and diagnostics ***
[2025-06-04 07:26:12]     "exeErrorCode": 0,
[2025-06-04 07:26:12]     "exeErrorDiag": "",
[2025-06-04 07:26:12]     "pilotErrorCode": 0,
[2025-06-04 07:26:12]     "pilotErrorDiag": "",
[2025-06-04 07:26:12]  *** Listing of results directory ***
[2025-06-04 07:26:12] total 383328
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:01 queuedata.json
[2025-06-04 07:26:12] -rwx------ 1 boinc boinc     37140 Jun  3 20:01 runpilot2-wrapper.sh
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc       100 Jun  4 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:26:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 05:40 run_atlas
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc       105 Jun  4 05:40 job.xml
[2025-06-04 07:26:12] -rw-r--r-- 2 boinc boinc 215736970 Jun  4 05:40 EVNT.45006593._001665.pool.root.1
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc      6689 Jun  4 05:40 init_data.xml
[2025-06-04 07:26:12] drwxrwx--x 2 boinc boinc      4096 Jun  4 05:40 shared
[2025-06-04 07:26:12] -rw-r--r-- 2 boinc boinc    508878 Jun  4 05:40 input.tar.gz
[2025-06-04 07:26:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:40 start_atlas.sh
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc         0 Jun  4 05:40 boinc_lockfile
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc      2526 Jun  4 05:40 pandaJob.out
[2025-06-04 07:26:12] -rw------- 1 boinc boinc    986077 Jun  4 05:40 agis_schedconf.cvmfs.json
[2025-06-04 07:26:12] -rw------- 1 boinc boinc   1603667 Jun  4 05:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:26:12] drwx------ 4 boinc boinc      4096 Jun  4 05:40 pilot3
[2025-06-04 07:26:12] -rw------- 1 boinc boinc        95 Jun  4 07:25 pilot_heartbeat.json
[2025-06-04 07:26:12] -rw------- 1 boinc boinc 171292860 Jun  4 07:25 HITS.45006595._041581.pool.root.1
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc       530 Jun  4 07:25 boinc_task_state.xml
[2025-06-04 07:26:12] -rw------- 1 boinc boinc      1013 Jun  4 07:25 memory_monitor_summary.json
[2025-06-04 07:26:12] -rw------- 1 boinc boinc    223540 Jun  4 07:25 log.45006595._041581.job.log.tgz.1
[2025-06-04 07:26:12] -rw------- 1 boinc boinc      7650 Jun  4 07:25 heartbeat.json
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc        27 Jun  4 07:26 wrapper_checkpoint.txt
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:26 boinc_mmap_file
[2025-06-04 07:26:12] -rw------- 1 boinc boinc      4429 Jun  4 07:26 pilotlog.txt
[2025-06-04 07:26:12] -rw------- 1 boinc boinc    604629 Jun  4 07:26 log.45006595._041581.job.log.1
[2025-06-04 07:26:12] -rw------- 1 boinc boinc       357 Jun  4 07:26 output.list
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:26 runtime_log
[2025-06-04 07:26:12] -rw------- 1 boinc boinc    849920 Jun  4 07:26 result.tar.gz
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc      8738 Jun  4 07:26 runtime_log.err
[2025-06-04 07:26:12] -rw------- 1 boinc boinc       659 Jun  4 07:26 3eKODmF8kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeYlKDmgVKurn.diag
[2025-06-04 07:26:12] -rw-r--r-- 1 boinc boinc     20808 Jun  4 07:26 stderr.txt
[2025-06-04 07:26:12] HITS file was successfully produced:
[2025-06-04 07:26:12] -rw------- 1 boinc boinc 171292860 Jun  4 07:25 shared/HITS.pool.root.1
[2025-06-04 07:26:12]  *** Contents of shared directory: ***
[2025-06-04 07:26:12] total 379320
[2025-06-04 07:26:12] -rw-r--r-- 2 boinc boinc 215736970 Jun  4 05:40 ATLAS.root_0
[2025-06-04 07:26:12] -rw-r--r-- 2 boinc boinc    508878 Jun  4 05:40 input.tar.gz
[2025-06-04 07:26:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:40 start_atlas.sh
[2025-06-04 07:26:12] -rw------- 1 boinc boinc 171292860 Jun  4 07:25 HITS.pool.root.1
[2025-06-04 07:26:12] -rw------- 1 boinc boinc    849920 Jun  4 07:26 result.tar.gz
07:26:34 (1261264): run_atlas exited; CPU time 12220.410344
07:26:34 (1261264): called boinc_finish(0)

</stderr_txt>
]]>

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