Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:53:02 (1058363): wrapper (7.7.26015): starting
07:53:02 (1058363): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 07:53:02] Arguments: --nthreads 3
[2025-06-04 07:53:02] Threads: 3
[2025-06-04 07:53:02] Checking for CVMFS
[2025-06-04 07:53:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:53:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:53:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:53:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:53:02] 2.9.2.0 321233 2168 82268 146769 3 56 31432972 36864001 0 130560 0 2000342 99.993 523147 35433 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 07:53:02] CVMFS is ok
[2025-06-04 07:53:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:53:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:53:02] Further information can be found at the LHC@home message board.
[2025-06-04 07:53:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:53:02] Checking for apptainer binary...
[2025-06-04 07:53:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:53:02] Running /usr/bin/apptainer --version
[2025-06-04 07:53:02] apptainer version 1.3.6-6.1
[2025-06-04 07:53:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:53:02] thA337a
[2025-06-04 07:53:02] apptainer works
[2025-06-04 07:53:02] Set ATHENA_PROC_NUMBER=3
[2025-06-04 07:53:02] Set ATHENA_CORE_NUMBER=3
[2025-06-04 07:53:02] Starting ATLAS job with PandaID=6677917809
[2025-06-04 07:53:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:05:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:05:48]  status=None
[2025-06-04 09:05:48]  status_code=0
[2025-06-04 09:05:48]  storage_token=
[2025-06-04 09:05:48]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677917809/log.45006595._041316.job.log.tgz.1
[2025-06-04 09:05:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/5e/log.45006595._041316.job.log.tgz.1
[2025-06-04 09:05:48]  workdir=None
[2025-06-04 09:05:48] ]
[2025-06-04 09:05:48] 2025-06-04 07:05:21,943 | INFO     | transferring file log.45006595._041316.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677917809/log.45006595._041316.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 09:05:48] 2025-06-04 07:05:21,943 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677917809/log.45006595._041316.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0413
[2025-06-04 09:05:48] 2025-06-04 07:05:21,958 | INFO     | adding to output.list: log.45006595._041316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/5e/log.45006595._041316.job.log.tg
[2025-06-04 09:05:48] 2025-06-04 07:05:21,958 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:05:48] 2025-06-04 07:05:21,958 | INFO     | summary of transferred files:
[2025-06-04 09:05:48] 2025-06-04 07:05:21,958 | INFO     |  -- lfn=log.45006595._041316.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:05:48] 2025-06-04 07:05:21,958 | INFO     | stage-out finished correctly
[2025-06-04 09:05:48] 2025-06-04 07:05:22,331 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:05:48] 2025-06-04 07:05:24,307 | INFO     | job 6677917809 has state=finished
[2025-06-04 09:05:48] 2025-06-04 07:05:24,307 | INFO     | preparing for final server update for job 6677917809 in state='finished'
[2025-06-04 09:05:48] 2025-06-04 07:05:24,307 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:05:48] 2025-06-04 07:05:24,307 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:05:48] 2025-06-04 07:05:24,307 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:05:48] 2025-06-04 07:05:24,308 | INFO     | job 6677917809 has finished - writing final server update
[2025-06-04 09:05:48] 2025-06-04 07:05:24,308 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:05:48] 2025-06-04 07:05:24,309 | INFO     | executing command: lscpu
[2025-06-04 09:05:48] 2025-06-04 07:05:24,325 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:05:48] 2025-06-04 07:05:26,652 | WARNING  | process 1068508 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:05:48] 2025-06-04 07:05:26,652 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677917809/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:48] 2025-06-04 07:05:26,653 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677917809/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:48] 2025-06-04 07:05:26,654 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2451241 B
[2025-06-04 09:05:48] 2025-06-04 07:05:26,654 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15311 B
[2025-06-04 09:05:48] 2025-06-04 07:05:26,654 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,197 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:05:48] 2025-06-04 07:05:28,199 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677917809/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,200 | INFO     | extracted standard info from prmon json
[2025-06-04 09:05:48] 2025-06-04 07:05:28,200 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:05:48] 2025-06-04 07:05:28,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:05:48] 2025-06-04 07:05:28,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:05:48] 2025-06-04 07:05:28,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | sum of deviations: -7319892182.5
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | mean x: 1749018634.5
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | mean y: 2424953.609375
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | -- intersect: 157540965118.7174
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | intersect: 157540965118.7174
[2025-06-04 09:05:48] 2025-06-04 07:05:28,202 | INFO     | chi2: 0.10235747536081723
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | -- intersect: 157540965118.7174
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | current memory leak: -90.07 B/s (using 64 data points, chi2=0.10)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | ..............................
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | . Timing measurements:
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | . get job = 0 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | . initial setup = 1 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,203 | INFO     | . payload setup = 3 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,204 | INFO     | . stage-in = 0 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,204 | INFO     | . payload execution = 4311 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,204 | INFO     | . stage-out = 0 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,204 | INFO     | . log creation = 0 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,204 | INFO     | ..............................
[2025-06-04 09:05:48] 2025-06-04 07:05:28,217 | INFO     | sufficient remaining disk space (368857579520 B)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,222 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | 
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | job summary report
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | --------------------------------------------------
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | PanDA job id: 6677917809
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | task id: 45006595
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | errors: (none)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | pilot state: finished 
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | transexitcode: 0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,236 | INFO     | exeerrorcode: 0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | exeerrordiag: 
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | exitcode: 0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | exitmsg: OK
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | cpuconsumptiontime: 12305 s
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | nevents: 400
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | neventsw: 0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | pid: 1068508
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | pgrp: 1068508
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | corecount: 3
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | event service: False
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | sizes: {0: 2405016, 1: 2405215, 3: 2405421, 11: 2405449, 4318: 2431525, 4320: 2440656, 4326: 2440770}
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | --------------------------------------------------
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | 
[2025-06-04 09:05:48] 2025-06-04 07:05:28,237 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 09:05:48] 2025-06-04 07:05:28,240 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6677917809: 2745433 B (within 2537553920 B limit)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,240 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6677917809/HITS.45006595._041316.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,240 | INFO     | total size of present files: 0 B (workdir size: 2745433 B)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,240 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6677917809/HITS.45006595._041316.pool.root.1 since it does not exist
[2025-06-04 09:05:48] 2025-06-04 07:05:28,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,250 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | job 6677917809 has completed (purged errors)
[2025-06-04 09:05:48] 2025-06-04 07:05:28,251 | INFO     | overall cleanup function is called
[2025-06-04 09:05:48] 2025-06-04 07:05:28,282 | INFO     | number of running child processes to parent process 1068508: 1
[2025-06-04 09:05:48] 2025-06-04 07:05:28,282 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:05:48] 2025-06-04 07:05:28,282 | INFO     | aborting job monitoring since job object (job id=6677917809) has expired
[2025-06-04 09:05:48] 2025-06-04 07:05:29,258 | INFO     | --- collectZombieJob: --- 10, [1068508]
[2025-06-04 09:05:48] 2025-06-04 07:05:29,258 | INFO     | zombie collector waiting for pid 1068508
[2025-06-04 09:05:48] 2025-06-04 07:05:29,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:05:48] 2025-06-04 07:05:29,258 | INFO     | collected zombie processes
[2025-06-04 09:05:48] 2025-06-04 07:05:29,259 | INFO     | will attempt to kill all subprocesses of pid=1068508
[2025-06-04 09:05:48] 2025-06-04 07:05:29,298 | INFO     | process IDs to be killed: [1068508] (in reverse order)
[2025-06-04 09:05:48] 2025-06-04 07:05:29,323 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:05:48] 2025-06-04 07:05:29,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:05:48] 2025-06-04 07:05:29,324 | INFO     | did not find any defunct processes belonging to 1068508
[2025-06-04 09:05:48] 2025-06-04 07:05:29,325 | INFO     | did not find any defunct processes belonging to 1068508
[2025-06-04 09:05:48] 2025-06-04 07:05:29,325 | INFO     | ready for new job
[2025-06-04 09:05:48] 2025-06-04 07:05:29,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:05:48] 2025-06-04 07:05:29,325 | INFO     | **************************************
[2025-06-04 09:05:48] 2025-06-04 07:05:29,326 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:05:48] 2025-06-04 07:05:29,326 | INFO     | **************************************
[2025-06-04 09:05:48] 2025-06-04 07:05:29,326 | INFO     | 
[2025-06-04 09:05:48] 2025-06-04 07:05:29,326 | INFO     | architecture information:
[2025-06-04 09:05:48] 2025-06-04 07:05:29,326 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:05:48] 2025-06-04 07:05:29,335 | INFO     | cat /etc/os-release:
[2025-06-04 09:05:48] NAME="CentOS Linux"
[2025-06-04 09:05:48] VERSION="7 (Core)"
[2025-06-04 09:05:48] ID="centos"
[2025-06-04 09:05:48] ID_LIKE="rhel fedora"
[2025-06-04 09:05:48] VERSION_ID="7"
[2025-06-04 09:05:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:05:48] ANSI_COLOR="0;31"
[2025-06-04 09:05:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:05:48] HOME_URL="https://www.centos.org/"
[2025-06-04 09:05:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:05:48] 
[2025-06-04 09:05:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:05:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:05:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:05:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:05:48] 
[2025-06-04 09:05:48] 2025-06-04 07:05:29,335 | INFO     | **************************************
[2025-06-04 09:05:48] 2025-06-04 07:05:29,838 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | INFO     | sufficient remaining disk space (368860725248 B)
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | INFO     | update_server=False
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | INFO     | aborting loop
[2025-06-04 09:05:48] 2025-06-04 07:05:29,852 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:05:48] 2025-06-04 07:05:29,853 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:05:48] 2025-06-04 07:05:29,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:05:48] 2025-06-04 07:05:29,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:05:48] 2025-06-04 07:05:29,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:48] 2025-06-04 07:05:30,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:05:48] 2025-06-04 07:05:30,405 | INFO     | all job control threads have been joined
[2025-06-04 09:05:48] 2025-06-04 07:05:30,795 | INFO     | all data control threads have been joined
[2025-06-04 09:05:48] 2025-06-04 07:05:30,858 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:30,858 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:30,858 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:30,896 | INFO     | all payload control threads have been joined
[2025-06-04 09:05:48] 2025-06-04 07:05:30,973 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:31,406 | INFO     | [job] control thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:31,801 | INFO     | [data] control thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:31,814 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:31,849 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:31,879 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:31,902 | INFO     | [payload] control thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:32,006 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:32,092 | INFO     | [job] validate thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:32,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:32,225 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:32,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:05:48] 2025-06-04 07:05:36,879 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:40,793 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:05:48] 2025-06-04 07:05:41,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:05:48] 2025-06-04 07:05:43,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964573386560)>', '<ExcThread(monitor, started 139964218058496)>']
[2025-06-04 09:05:48] 2025-06-04 07:05:43,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:05:48] 2025-06-04 07:05:43,925 | INFO     | [monitor] control thread has ended
[2025-06-04 09:05:48] 2025-06-04 07:05:48,112 | INFO     | all workflow threads have been joined
[2025-06-04 09:05:48] 2025-06-04 07:05:48,112 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:05:48] 2025-06-04 07:05:48,112 | INFO     | traces error code: 0
[2025-06-04 09:05:48] 2025-06-04 07:05:48,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:05:48] 2025-06-04 07:05:48,163 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:05:48] 2025-06-04 07:05:48,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:05:48] 2025-06-04 07:05:48,169 [wrapper] pilotpid: 1062014
[2025-06-04 09:05:48] 2025-06-04 07:05:48,171 [wrapper] Pilot exit status: 0
[2025-06-04 09:05:48] 2025-06-04 07:05:48,179 [wrapper] pandaids: 6677917809
[2025-06-04 09:05:48] 2025-06-04 07:05:48,195 [wrapper] cleanup supervisor_pilot 1077906 1062015
[2025-06-04 09:05:48] 2025-06-04 07:05:48,198 [wrapper] Test setup, not cleaning
[2025-06-04 09:05:48] 2025-06-04 07:05:48,200 [wrapper] apfmon messages muted
[2025-06-04 09:05:48] 2025-06-04 07:05:48,203 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:05:48] 2025-06-04 07:05:48,205 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:05:48]  *** Error codes and diagnostics ***
[2025-06-04 09:05:48]     "exeErrorCode": 0,
[2025-06-04 09:05:48]     "exeErrorDiag": "",
[2025-06-04 09:05:48]     "pilotErrorCode": 0,
[2025-06-04 09:05:48]     "pilotErrorDiag": "",
[2025-06-04 09:05:48]  *** Listing of results directory ***
[2025-06-04 09:05:48] total 391080
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 09:05:48] -rwx------ 1 boinc boinc     37140 Jun  3 19:59 runpilot2-wrapper.sh
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:59 queuedata.json
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc       100 Jun  4 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:05:48] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 07:53 run_atlas
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc       105 Jun  4 07:53 job.xml
[2025-06-04 09:05:48] -rw-r--r-- 2 boinc boinc 216740736 Jun  4 07:53 EVNT.45006593._001654.pool.root.1
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc      6930 Jun  4 07:53 init_data.xml
[2025-06-04 09:05:48] drwxrwx--x 2 boinc boinc      4096 Jun  4 07:53 shared
[2025-06-04 09:05:48] -rw-r--r-- 2 boinc boinc    508877 Jun  4 07:53 input.tar.gz
[2025-06-04 09:05:48] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:53 start_atlas.sh
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc         0 Jun  4 07:53 boinc_lockfile
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc      2525 Jun  4 07:53 pandaJob.out
[2025-06-04 09:05:48] -rw------- 1 boinc boinc    986745 Jun  4 07:53 agis_schedconf.cvmfs.json
[2025-06-04 09:05:48] -rw------- 1 boinc boinc   1603667 Jun  4 07:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:05:48] drwx------ 4 boinc boinc      4096 Jun  4 07:53 pilot3
[2025-06-04 09:05:48] -rw------- 1 boinc boinc 178553619 Jun  4 09:05 HITS.45006595._041316.pool.root.1
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc       530 Jun  4 09:05 boinc_task_state.xml
[2025-06-04 09:05:48] -rw------- 1 boinc boinc      1017 Jun  4 09:05 memory_monitor_summary.json
[2025-06-04 09:05:48] -rw------- 1 boinc boinc    233603 Jun  4 09:05 log.45006595._041316.job.log.tgz.1
[2025-06-04 09:05:48] -rw------- 1 boinc boinc      7652 Jun  4 09:05 heartbeat.json
[2025-06-04 09:05:48] -rw------- 1 boinc boinc        95 Jun  4 09:05 pilot_heartbeat.json
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:05 boinc_mmap_file
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc        27 Jun  4 09:05 wrapper_checkpoint.txt
[2025-06-04 09:05:48] -rw------- 1 boinc boinc      4552 Jun  4 09:05 pilotlog.txt
[2025-06-04 09:05:48] -rw------- 1 boinc boinc    429007 Jun  4 09:05 log.45006595._041316.job.log.1
[2025-06-04 09:05:48] -rw------- 1 boinc boinc       357 Jun  4 09:05 output.list
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc       620 Jun  4 09:05 runtime_log
[2025-06-04 09:05:48] -rw------- 1 boinc boinc    686080 Jun  4 09:05 result.tar.gz
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc      8738 Jun  4 09:05 runtime_log.err
[2025-06-04 09:05:48] -rw------- 1 boinc boinc       659 Jun  4 09:05 HwEODm75kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEWZKDmaqS0pn.diag
[2025-06-04 09:05:48] -rw-r--r-- 1 boinc boinc     22212 Jun  4 09:05 stderr.txt
[2025-06-04 09:05:48] HITS file was successfully produced:
[2025-06-04 09:05:48] -rw------- 1 boinc boinc 178553619 Jun  4 09:05 shared/HITS.pool.root.1
[2025-06-04 09:05:48]  *** Contents of shared directory: ***
[2025-06-04 09:05:48] total 387232
[2025-06-04 09:05:48] -rw-r--r-- 2 boinc boinc 216740736 Jun  4 07:53 ATLAS.root_0
[2025-06-04 09:05:48] -rw-r--r-- 2 boinc boinc    508877 Jun  4 07:53 input.tar.gz
[2025-06-04 09:05:48] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:53 start_atlas.sh
[2025-06-04 09:05:48] -rw------- 1 boinc boinc 178553619 Jun  4 09:05 HITS.pool.root.1
[2025-06-04 09:05:48] -rw------- 1 boinc boinc    686080 Jun  4 09:05 result.tar.gz
09:05:50 (1058363): run_atlas exited; CPU time 12317.301410
09:05:50 (1058363): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN