Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 00:18:00 (1904014): Detected: vboxwrapper 26206
2025-06-04 00:18:00 (1904014): Detected: BOINC client v8.0.2
2025-06-04 00:18:00 (1904014): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-04 00:18:00 (1904014): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 00:18:00 (1904014): Create VM. (boinc_ba06ae331ad49898, slot#5)
2025-06-04 00:18:01 (1904014): Setting Memory Size for VM. (4800MB)
2025-06-04 00:18:01 (1904014): Setting CPU Count for VM. (8)
2025-06-04 00:18:01 (1904014): Setting Chipset Options for VM.
2025-06-04 00:18:01 (1904014): Setting Graphics Controller Options for VM.
2025-06-04 00:18:01 (1904014): Setting Boot Options for VM.
2025-06-04 00:18:01 (1904014): Setting Network Configuration for NAT.
2025-06-04 00:18:01 (1904014): Enabling VM Network Access.
2025-06-04 00:18:02 (1904014): Disabling USB Support for VM.
2025-06-04 00:18:02 (1904014): Disabling COM Port Support for VM.
2025-06-04 00:18:02 (1904014): Disabling LPT Port Support for VM.
2025-06-04 00:18:02 (1904014): Disabling Audio Support for VM.
2025-06-04 00:18:02 (1904014): Disabling Clipboard Support for VM.
2025-06-04 00:18:02 (1904014): Disabling Drag and Drop Support for VM.
2025-06-04 00:18:02 (1904014): Adding storage controller(s) to VM.
2025-06-04 00:18:02 (1904014): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 00:18:04 (1904014): Adding VirtualBox Guest Additions to VM.
2025-06-04 00:18:04 (1904014): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 00:18:05 (1904014): forwarding host port 33989 to guest port 80
2025-06-04 00:18:05 (1904014): Enabling remote desktop for VM.
2025-06-04 00:18:05 (1904014): Required extension pack not installed, remote desktop not enabled.
2025-06-04 00:18:05 (1904014): Enabling shared directory for VM.
2025-06-04 00:18:05 (1904014): Starting VM using VBoxManage interface. (boinc_ba06ae331ad49898, slot#5)
2025-06-04 00:18:07 (1904014): Successfully started VM. (PID = '1904664')
2025-06-04 00:18:07 (1904014): Reporting VM Process ID to BOINC.
2025-06-04 00:18:07 (1904014): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-04 00:18:07 (1904014): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 00:18:07 (1904014): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 00:18:07 (1904014): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 00:18:07 (1904014): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 00:18:07 (1904014): Detected: Web Application Enabled (http://localhost:33989)
2025-06-04 00:18:07 (1904014): Preference change detected
2025-06-04 00:18:07 (1904014): Setting CPU throttle for VM. (50%)
2025-06-04 00:18:07 (1904014): Setting network throttle for VM. (1024KB)
2025-06-04 00:18:07 (1904014): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 00:18:09 (1904014): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 00:18:09 (1904014): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 00:18:13 (1904014): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 00:18:13 (1904014): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 00:18:13 (1904014): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 00:18:21 (1904014): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 00:18:21 (1904014): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 00:18:29 (1904014): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000177 main     Log opened 2025-06-03T21:18:27.561464000Z
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000268 main     OS Product: Linux
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000283 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000297 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000311 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000311 main     Process ID: 1368
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.000311 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 00:18:29 (1904014): Guest Log: 00:00:00.010145 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 00:18:52 (1904014): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 00:18:52 (1904014): Guest Log: [INFO] Mounting shared directory
2025-06-04 00:18:52 (1904014): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 00:20:39 (1904014): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 00:20:39 (1904014): Guest Log: [INFO] Detected branch: prod
2025-06-04 00:20:39 (1904014): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 00:20:39 (1904014): Guest Log: Copying input files
2025-06-04 00:20:40 (1904014): Guest Log: Copied input files into RunAtlas.
2025-06-04 00:20:40 (1904014): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 00:20:40 (1904014): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 00:20:40 (1904014): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 00:20:40 (1904014): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 00:22:31 (1904014): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 00:22:31 (1904014): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 00:22:31 (1904014): Guest Log: 2.6.3.0 1694 2 30316 146756 4 1 3120513 4096000 0 65024 0 0 n/a 1290 30 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 00:22:32 (1904014): Guest Log: copied the webapp to /var/www
2025-06-04 00:22:32 (1904014): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 00:22:32 (1904014): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 00:22:32 (1904014): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 00:22:32 (1904014): Guest Log:  *** Starting ATLAS job. (PandaID=6677919168 taskID=45006595) ***
2025-06-04 01:57:10 (1904014): Status Report: Elapsed Time: '6000.000000'
2025-06-04 01:57:10 (1904014): Status Report: CPU Time: '16821.780000'
2025-06-04 02:07:50 (1904014): Guest Log:  *** Job finished ***
2025-06-04 02:07:50 (1904014): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:32,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:32,112 | INFO     | [data] copytool_out thread has finished
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:36,072 | INFO     | [data] queue_monitor thread has finished
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:37,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193022555968)>', '<ExcThread(monitor, started 140192715347712)>']
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:38,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:38,108 | INFO     | [monitor] control thread has ended
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:42,793 | INFO     | all workflow threads have been joined
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:42,793 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:42,793 | INFO     | traces error code: 0
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:42,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,104 [wrapper] ==== pilot stdout END ====
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,122 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,133 [wrapper] pilotpid: 6149
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,144 [wrapper] Pilot exit status: 0
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,338 [wrapper] pandaids: 6677919168
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,381 [wrapper] cleanup supervisor_pilot  2389 6150
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,399 [wrapper] Test setup, not cleaning
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,407 [wrapper] apfmon messages muted
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,416 [wrapper] ==== wrapper stdout END ====
2025-06-04 02:07:50 (1904014): Guest Log: 2025-06-03 23:06:43,423 [wrapper] ==== wrapper stderr END ====
2025-06-04 02:07:50 (1904014): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 02:07:50 (1904014): Guest Log:     "exeErrorCode": 0,
2025-06-04 02:07:50 (1904014): Guest Log:     "exeErrorDiag": "",
2025-06-04 02:07:50 (1904014): Guest Log:     "pilotErrorCode": 0,
2025-06-04 02:07:50 (1904014): Guest Log:     "pilotErrorDiag": "",
2025-06-04 02:07:50 (1904014): Guest Log:  *** Listing of results directory ***
2025-06-04 02:07:50 (1904014): Guest Log: total 183452
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 17:46 pilot3.tar.gz
2025-06-04 02:07:50 (1904014): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 18:01 runpilot2-wrapper.sh
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 18:01 queuedata.json
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 21:20 start_atlas.sh
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas    508876 Jun  3 21:20 input.tar.gz
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas      7106 Jun  3 21:20 init_data.xml
2025-06-04 02:07:50 (1904014): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 21:20 EVNT.45006593._001664.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas      2526 Jun  3 21:22 pandaJob.out
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas    986869 Jun  3 21:30 agis_schedconf.cvmfs.json
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 21:30 agis_ddmendpoints.agis.ALL.json
2025-06-04 02:07:50 (1904014): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 21:30 pilot3
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas 182660132 Jun  3 23:01 HITS.45006595._041554.pool.root.1
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  3 23:02 memory_monitor_summary.json
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas    293994 Jun  3 23:02 log.45006595._041554.job.log.tgz.1
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 23:06 pilot_heartbeat.json
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas      7703 Jun  3 23:06 heartbeat.json
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  3 23:06 pilotlog.txt
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas    425871 Jun  3 23:06 log.45006595._041554.job.log.1
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 23:06 output.list
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 23:06 runtime_log
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas    737280 Jun  3 23:06 result.tar.gz
2025-06-04 02:07:50 (1904014): Guest Log: -rw-r--r--. 1 atlas atlas      8612 Jun  3 23:06 runtime_log.err
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas       663 Jun  3 23:06 MMiNDmF8kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEYlKDmeBTjXm.diag
2025-06-04 02:07:50 (1904014): Guest Log: Looking for outputfile HITS.45006595._041554.pool.root.1
2025-06-04 02:07:50 (1904014): Guest Log: HITS file was successfully produced
2025-06-04 02:07:50 (1904014): Guest Log: -rw-------. 1 atlas atlas 182660132 Jun  3 23:01 /home/atlas/RunAtlas/HITS.45006595._041554.pool.root.1
2025-06-04 02:07:50 (1904014): Guest Log: Successfully finished the ATLAS job!
2025-06-04 02:07:50 (1904014): Guest Log: Copying the results back to the shared directory!
2025-06-04 02:07:51 (1904014): Guest Log:  *** Contents of shared directory: ***
2025-06-04 02:07:51 (1904014): Guest Log: total 210836
2025-06-04 02:07:51 (1904014): Guest Log: -rw-r--r--. 1 root root 214618807 Jun  3 21:17 ATLAS.root_0
2025-06-04 02:07:51 (1904014): Guest Log: -rw-r--r--. 1 root root      7106 Jun  3 21:18 init_data.xml
2025-06-04 02:07:51 (1904014): Guest Log: -rw-r--r--. 1 root root    508876 Jun  3 21:17 input.tar.gz
2025-06-04 02:07:51 (1904014): Guest Log: -rw-r--r--. 1 root root    737280 Jun  3  2025 result.tar.gz
2025-06-04 02:07:51 (1904014): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 21:17 start_atlas.sh
2025-06-04 02:07:51 (1904014): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 02:07:51 (1904014): VM Completion File Detected.
2025-06-04 02:07:51 (1904014): Powering off VM.
2025-06-04 02:07:51 (1904014): Successfully stopped VM.
2025-06-04 02:07:51 (1904014): Deregistering VM. (boinc_ba06ae331ad49898, slot#5)
2025-06-04 02:07:52 (1904014): Removing network bandwidth throttle group from VM.
2025-06-04 02:07:52 (1904014): Removing VM from VirtualBox.
02:07:57 (1904014): called boinc_finish(0)

</stderr_txt>
]]>

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