Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:39:54 (4883): wrapper (7.7.26015): starting
07:39:54 (4883): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:39:54] Arguments: --nthreads 8
[2025-06-04 07:39:54] Threads: 8
[2025-06-04 07:39:54] Checking for CVMFS
[2025-06-04 07:39:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:39:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:39:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:39:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:39:56] 2.11.2.0 29550 32794 94888 146769 1 146 14544784 25165825 3359 130560 0 17479052 99.817 19645586 2079 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:39:56] CVMFS is ok
[2025-06-04 07:39:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:39:56] Checking for apptainer binary...
[2025-06-04 07:39:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:39:56] Running /usr/bin/apptainer --version
[2025-06-04 07:39:56] apptainer version 1.3.2-1.el7
[2025-06-04 07:39:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:41:29] cg-vwn256.simple-grid.lan
[2025-06-04 07:41:29] apptainer works
[2025-06-04 07:41:29] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:41:29] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:41:29] Starting ATLAS job with PandaID=6677917906
[2025-06-04 07:41:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:06:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:06:58] 2025-06-04 09:52:03,644 | INFO     | mean x: 1749024829.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,644 | INFO     | mean y: 2494970.105820106
[2025-06-04 12:06:58] 2025-06-04 09:52:03,644 | INFO     | -- intersect: -1488916029.9069057
[2025-06-04 12:06:58] 2025-06-04 09:52:03,644 | INFO     | intersect: -1488916029.9069057
[2025-06-04 12:06:58] 2025-06-04 09:52:03,647 | INFO     | chi2: 9.28202631690514e-05
[2025-06-04 12:06:58] 2025-06-04 09:52:03,648 | INFO     | current chi2=9.28202631690514e-05 (change=38.58882693177307 %)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,648 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,649 | INFO     | sum of deviations: 1521132752.4999983
[2025-06-04 12:06:58] 2025-06-04 09:52:03,650 | INFO     | mean x: 1749024981.5
[2025-06-04 12:06:58] 2025-06-04 09:52:03,650 | INFO     | mean y: 2495217.4945652173
[2025-06-04 12:06:58] 2025-06-04 09:52:03,650 | INFO     | -- intersect: -1374853994.8311746
[2025-06-04 12:06:58] 2025-06-04 09:52:03,650 | INFO     | intersect: -1374853994.8311746
[2025-06-04 12:06:58] 2025-06-04 09:52:03,650 | INFO     | chi2: 6.589410857540686e-05
[2025-06-04 12:06:58] 2025-06-04 09:52:03,650 | INFO     | current chi2=6.589410857540686e-05 (change=29.008918607141375 %)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,651 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,652 | INFO     | sum of deviations: 1289068653.0000002
[2025-06-04 12:06:58] 2025-06-04 09:52:03,652 | INFO     | mean x: 1749025134.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,652 | INFO     | mean y: 2495449.067039106
[2025-06-04 12:06:58] 2025-06-04 09:52:03,652 | INFO     | -- intersect: -1265296926.5757892
[2025-06-04 12:06:58] 2025-06-04 09:52:03,653 | INFO     | intersect: -1265296926.5757892
[2025-06-04 12:06:58] 2025-06-04 09:52:03,653 | INFO     | chi2: 3.808493552960941e-05
[2025-06-04 12:06:58] 2025-06-04 09:52:03,653 | INFO     | current chi2=3.808493552960941e-05 (change=42.20282153748787 %)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,653 | INFO     | sum of square deviations: 1633472487.5
[2025-06-04 12:06:58] 2025-06-04 09:52:03,655 | INFO     | sum of deviations: 1075920806.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,655 | INFO     | mean x: 1749025286.5
[2025-06-04 12:06:58] 2025-06-04 09:52:03,655 | INFO     | mean y: 2495673.3103448274
[2025-06-04 12:06:58] 2025-06-04 09:52:03,655 | INFO     | -- intersect: -1149536399.6911054
[2025-06-04 12:06:58] 2025-06-04 09:52:03,655 | INFO     | intersect: -1149536399.6911054
[2025-06-04 12:06:58] 2025-06-04 09:52:03,656 | INFO     | chi2: 2.391912954868907e-05
[2025-06-04 12:06:58] 2025-06-04 09:52:03,656 | INFO     | current chi2=2.391912954868907e-05 (change=37.19529988414194 %)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,656 | INFO     | sum of square deviations: 1496660620.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,658 | INFO     | sum of deviations: 891296193.0000002
[2025-06-04 12:06:58] 2025-06-04 09:52:03,658 | INFO     | mean x: 1749025439.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,658 | INFO     | mean y: 2495878.7041420117
[2025-06-04 12:06:58] 2025-06-04 09:52:03,658 | INFO     | -- intersect: -1039089430.8905302
[2025-06-04 12:06:58] 2025-06-04 09:52:03,658 | INFO     | intersect: -1039089430.8905302
[2025-06-04 12:06:58] 2025-06-04 09:52:03,658 | INFO     | chi2: 1.1304016874401858e-05
[2025-06-04 12:06:58] 2025-06-04 09:52:03,659 | INFO     | current chi2=1.1304016874401858e-05 (change=52.740684599781375 %)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,659 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,660 | INFO     | sum of deviations: 809231581.5
[2025-06-04 12:06:58] 2025-06-04 09:52:03,660 | INFO     | mean x: 1749025591.5
[2025-06-04 12:06:58] 2025-06-04 09:52:03,660 | INFO     | mean y: 2495975.5670731706
[2025-06-04 12:06:58] 2025-06-04 09:52:03,660 | INFO     | -- intersect: -1032348693.7121475
[2025-06-04 12:06:58] 2025-06-04 09:52:03,660 | INFO     | intersect: -1032348693.7121475
[2025-06-04 12:06:58] 2025-06-04 09:52:03,661 | INFO     | chi2: 1.0895376607156784e-05
[2025-06-04 12:06:58] 2025-06-04 09:52:03,661 | INFO     | current chi2=1.0895376607156784e-05 (change=3.615000506328392 %)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,661 | INFO     | left removable region: 140
[2025-06-04 12:06:58] 2025-06-04 09:52:03,661 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,662 | INFO     | sum of deviations: 115295002.0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,662 | INFO     | mean x: 1749027543.5
[2025-06-04 12:06:58] 2025-06-04 09:52:03,662 | INFO     | mean y: 2497136.522727273
[2025-06-04 12:06:58] 2025-06-04 09:52:03,662 | INFO     | -- intersect: -951916804.8248733
[2025-06-04 12:06:58] 2025-06-04 09:52:03,662 | INFO     | intersect: -951916804.8248733
[2025-06-04 12:06:58] 2025-06-04 09:52:03,665 | INFO     | chi2: 4.282217923155447e-06
[2025-06-04 12:06:58] 2025-06-04 09:52:03,666 | INFO     | -- intersect: -951916804.8248733
[2025-06-04 12:06:58] 2025-06-04 09:52:03,666 | INFO     | current memory leak: 0.55 B/s (using 88 data points, chi2=0.00)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,667 | INFO     | ..............................
[2025-06-04 12:06:58] 2025-06-04 09:52:03,667 | INFO     | . Timing measurements:
[2025-06-04 12:06:58] 2025-06-04 09:52:03,667 | INFO     | . get job = 0 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,667 | INFO     | . initial setup = 6 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,668 | INFO     | . payload setup = 131 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,668 | INFO     | . stage-in = 0 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,668 | INFO     | . payload execution = 14424 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,668 | INFO     | . stage-out = 2 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,668 | INFO     | . log creation = 1 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,668 | INFO     | ..............................
[2025-06-04 12:06:58] 2025-06-04 09:52:03,822 | INFO     | 
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | job summary report
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | --------------------------------------------------
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | PanDA job id: 6677917906
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | task id: 45006595
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | errors: (none)
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | pilot state: finished 
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | transexitcode: 0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,823 | INFO     | exeerrorcode: 0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | exeerrordiag: 
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | exitcode: 0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | exitmsg: OK
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | cpuconsumptiontime: 51091 s
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | nevents: 400
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | neventsw: 0
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | pid: 17272
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | pgrp: 17272
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | corecount: 8
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | event service: False
[2025-06-04 12:06:58] 2025-06-04 09:52:03,824 | INFO     | sizes: {0: 2405015, 1: 2405214, 12: 2405214, 23: 2405242, 34: 2405270, 44: 2405298, 55: 2405454, 66: 2405482, 77: 2405510, 86: 2405772, 87: 2405800, 14559: 2436032
[2025-06-04 12:06:58] 2025-06-04 09:52:03,825 | INFO     | --------------------------------------------------
[2025-06-04 12:06:58] 2025-06-04 09:52:03,825 | INFO     | 
[2025-06-04 12:06:58] 2025-06-04 09:52:03,825 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 12:06:58] 2025-06-04 09:52:04,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:06:58] 2025-06-04 09:52:04,117 | INFO     | job 6677917906 has completed (purged errors)
[2025-06-04 12:06:58] 2025-06-04 09:52:04,118 | INFO     | overall cleanup function is called
[2025-06-04 12:06:58] 2025-06-04 09:52:05,127 | INFO     | --- collectZombieJob: --- 10, [17272]
[2025-06-04 12:06:58] 2025-06-04 09:52:05,128 | INFO     | zombie collector waiting for pid 17272
[2025-06-04 12:06:58] 2025-06-04 09:52:05,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:06:58] 2025-06-04 09:52:05,128 | INFO     | collected zombie processes
[2025-06-04 12:06:58] 2025-06-04 09:52:05,128 | INFO     | will attempt to kill all subprocesses of pid=17272
[2025-06-04 12:06:58] 2025-06-04 09:52:05,247 | INFO     | process IDs to be killed: [17272] (in reverse order)
[2025-06-04 12:06:58] 2025-06-04 09:52:05,789 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:06:58] 2025-06-04 09:52:05,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:06:58] 2025-06-04 09:52:05,794 | INFO     | did not find any defunct processes belonging to 17272
[2025-06-04 12:06:58] 2025-06-04 09:52:05,797 | INFO     | did not find any defunct processes belonging to 17272
[2025-06-04 12:06:58] 2025-06-04 09:52:05,798 | INFO     | ready for new job
[2025-06-04 12:06:58] 2025-06-04 09:52:05,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:06:58] 2025-06-04 09:52:05,800 | INFO     | **************************************
[2025-06-04 12:06:58] 2025-06-04 09:52:05,800 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:06:58] 2025-06-04 09:52:05,800 | INFO     | **************************************
[2025-06-04 12:06:58] 2025-06-04 09:52:05,800 | INFO     | 
[2025-06-04 12:06:58] 2025-06-04 09:52:05,801 | INFO     | pilot is running in a VM
[2025-06-04 12:06:58] 2025-06-04 09:52:05,801 | INFO     | architecture information:
[2025-06-04 12:06:58] 2025-06-04 09:52:05,802 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:06:58] 2025-06-04 09:52:06,078 | INFO     | cat /etc/os-release:
[2025-06-04 12:06:58] NAME="CentOS Linux"
[2025-06-04 12:06:58] VERSION="7 (Core)"
[2025-06-04 12:06:58] ID="centos"
[2025-06-04 12:06:58] ID_LIKE="rhel fedora"
[2025-06-04 12:06:58] VERSION_ID="7"
[2025-06-04 12:06:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:06:58] ANSI_COLOR="0;31"
[2025-06-04 12:06:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:06:58] HOME_URL="https://www.centos.org/"
[2025-06-04 12:06:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:06:58] 
[2025-06-04 12:06:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:06:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:06:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:06:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:06:58] 
[2025-06-04 12:06:58] 2025-06-04 09:52:06,078 | INFO     | **************************************
[2025-06-04 12:06:58] 2025-06-04 09:52:06,581 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 12:06:58] 2025-06-04 09:52:06,871 | INFO     | sufficient remaining disk space (496736665600 B)
[2025-06-04 12:06:58] 2025-06-04 09:52:06,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:06:58] 2025-06-04 09:52:06,871 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:06:58] 2025-06-04 09:52:06,872 | INFO     | update_server=False
[2025-06-04 12:06:58] 2025-06-04 09:52:06,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:06:58] 2025-06-04 09:52:06,872 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:06:58] 2025-06-04 09:52:06,873 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:06:58] 2025-06-04 09:52:06,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:06:58] 2025-06-04 09:52:06,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:06:58] 2025-06-04 09:52:07,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:06:58] 2025-06-04 09:52:07,532 | INFO     | all job control threads have been joined
[2025-06-04 12:06:58] 2025-06-04 09:52:07,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:06:58] 2025-06-04 09:52:07,572 | INFO     | aborting loop
[2025-06-04 12:06:58] 2025-06-04 09:52:07,878 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:07,908 | INFO     | all payload control threads have been joined
[2025-06-04 12:06:58] 2025-06-04 09:52:07,949 | INFO     | all data control threads have been joined
[2025-06-04 12:06:58] 2025-06-04 09:52:08,126 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,129 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,375 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,538 | INFO     | [job] control thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,577 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:06:58] 2025-06-04 09:52:08,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:06:58] 2025-06-04 09:52:08,914 | INFO     | [payload] control thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,941 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:08,955 | INFO     | [data] control thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:09,159 | INFO     | [job] validate thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:09,160 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:09,268 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:09,322 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:09,844 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:12,741 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:06:58] 2025-06-04 09:52:13,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462269806400)>', '<ExcThread(monitor, started 140461838677760)>']
[2025-06-04 12:06:58] 2025-06-04 09:52:13,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:06:58] 2025-06-04 09:52:13,912 | INFO     | [monitor] control thread has ended
[2025-06-04 12:06:58] 2025-06-04 09:52:18,368 | INFO     | all workflow threads have been joined
[2025-06-04 12:06:58] 2025-06-04 09:52:18,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:06:58] 2025-06-04 09:52:18,369 | INFO     | traces error code: 0
[2025-06-04 12:06:58] 2025-06-04 09:52:18,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:06:58] 2025-06-04 09:52:18,674 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:06:58] 2025-06-04 09:52:18,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:06:58] 2025-06-04 09:52:18,744 [wrapper] pilotpid: 10614
[2025-06-04 12:06:58] 2025-06-04 09:52:18,819 [wrapper] Pilot exit status: 0
[2025-06-04 12:06:58] 2025-06-04 09:52:19,188 [wrapper] pandaids: 6677917906
[2025-06-04 12:06:58] 2025-06-04 09:52:19,288 [wrapper] cleanup supervisor_pilot 20272 10615
[2025-06-04 12:06:58] 2025-06-04 09:52:19,305 [wrapper] Test setup, not cleaning
[2025-06-04 12:06:58] 2025-06-04 09:52:19,338 [wrapper] apfmon messages muted
[2025-06-04 12:06:58] 2025-06-04 09:52:19,436 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:06:58] 2025-06-04 09:52:19,494 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:06:58]  *** Error codes and diagnostics ***
[2025-06-04 12:06:58]     "exeErrorCode": 0,
[2025-06-04 12:06:58]     "exeErrorDiag": "",
[2025-06-04 12:06:58]     "pilotErrorCode": 0,
[2025-06-04 12:06:58]     "pilotErrorDiag": "",
[2025-06-04 12:06:58]  *** Listing of results directory ***
[2025-06-04 12:06:58] total 390380
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:00 queuedata.json
[2025-06-04 12:06:58] -rwx------. 1 boinc boinc     37140 Jun  3 20:00 runpilot2-wrapper.sh
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:06:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:39 run_atlas
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:39 job.xml
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc      6390 Jun  4 07:39 init_data.xml
[2025-06-04 12:06:58] -rw-r--r--. 2 boinc boinc 214465038 Jun  4 07:39 EVNT.45006593._001658.pool.root.1
[2025-06-04 12:06:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:39 start_atlas.sh
[2025-06-04 12:06:58] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:39 shared
[2025-06-04 12:06:58] -rw-r--r--. 2 boinc boinc    508877 Jun  4 07:39 input.tar.gz
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:39 boinc_lockfile
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc      2526 Jun  4 07:41 pandaJob.out
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc    986745 Jun  4 07:44 agis_schedconf.cvmfs.json
[2025-06-04 12:06:58] drwx------. 4 boinc boinc      4096 Jun  4 07:44 pilot3
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc 178077391 Jun  4 11:49 HITS.45006595._041413.pool.root.1
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:49 boinc_task_state.xml
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc      1018 Jun  4 11:50 memory_monitor_summary.json
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc   1603667 Jun  4 11:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc    400253 Jun  4 11:50 log.45006595._041413.job.log.tgz.1
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc        95 Jun  4 11:51 pilot_heartbeat.json
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc      7690 Jun  4 11:52 heartbeat.json
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc      4540 Jun  4 11:52 pilotlog.txt
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc   1295038 Jun  4 11:52 log.45006595._041413.job.log.1
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc       357 Jun  4 11:52 output.list
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:52 runtime_log
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc   1710080 Jun  4 11:52 result.tar.gz
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc      8673 Jun  4 11:52 runtime_log.err
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc       656 Jun  4 11:52 BczLDmH7kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsWlKDmOu2XTm.diag
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:06 boinc_mmap_file
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:06 wrapper_checkpoint.txt
[2025-06-04 12:06:58] -rw-r--r--. 1 boinc boinc     20551 Jun  4 12:06 stderr.txt
[2025-06-04 12:06:58] HITS file was successfully produced:
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc 178077391 Jun  4 11:49 shared/HITS.pool.root.1
[2025-06-04 12:06:58]  *** Contents of shared directory: ***
[2025-06-04 12:06:58] total 385532
[2025-06-04 12:06:58] -rw-r--r--. 2 boinc boinc 214465038 Jun  4 07:39 ATLAS.root_0
[2025-06-04 12:06:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:39 start_atlas.sh
[2025-06-04 12:06:58] -rw-r--r--. 2 boinc boinc    508877 Jun  4 07:39 input.tar.gz
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc 178077391 Jun  4 11:49 HITS.pool.root.1
[2025-06-04 12:06:58] -rw-------. 1 boinc boinc   1710080 Jun  4 11:52 result.tar.gz
12:07:00 (4883): run_atlas exited; CPU time 51292.895932
12:07:00 (4883): called boinc_finish(0)

</stderr_txt>
]]>

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