Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
09:59:47 (1666673): wrapper (7.7.26015): starting
09:59:47 (1666673): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 09:59:47] Arguments: --nthreads 12
[2025-06-05 09:59:47] Threads: 12
[2025-06-05 09:59:47] Checking for CVMFS
[2025-06-05 09:59:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:59:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:59:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:59:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:59:47] 2.12.7.0 600724 3774 59716 146810 1 56 3671799 4096000 0 130560 0 2963190 99.991 845849 232 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 09:59:47] CVMFS is ok
[2025-06-05 09:59:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:59:47] Checking for apptainer binary...
[2025-06-05 09:59:47] apptainer is not installed, using version from CVMFS
[2025-06-05 09:59:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:59:48] lithium
[2025-06-05 09:59:48] apptainer works
[2025-06-05 09:59:48] Set ATHENA_PROC_NUMBER=12
[2025-06-05 09:59:48] Set ATHENA_CORE_NUMBER=12
[2025-06-05 09:59:48] Starting ATLAS job with PandaID=6677919971
[2025-06-05 09:59:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:26:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:26:06] 2025-06-05 09:24:59,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:01,793 | INFO     | monitor loop #386: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:01,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:02,898 | INFO     | PID=1670391 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 11:26:06] 2025-06-05 09:25:04,297 | INFO     | monitor loop #387: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:04,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:06,801 | INFO     | monitor loop #388: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:06,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:09,305 | INFO     | monitor loop #389: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:09,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:11,811 | INFO     | monitor loop #390: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:11,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:14,314 | INFO     | monitor loop #391: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:14,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:16,818 | INFO     | monitor loop #392: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:16,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:19,322 | INFO     | monitor loop #393: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:19,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:21,825 | INFO     | monitor loop #394: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:21,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:24,328 | INFO     | monitor loop #395: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:24,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:25,054 | INFO     | PID=1670391 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 11:26:06] 2025-06-05 09:25:26,833 | INFO     | monitor loop #396: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:26,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:29,333 | INFO     | monitor loop #397: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:29,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:31,837 | INFO     | monitor loop #398: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:31,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:34,340 | INFO     | monitor loop #399: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:34,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:36,845 | INFO     | monitor loop #400: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:36,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:39,348 | INFO     | monitor loop #401: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:39,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:41,853 | INFO     | monitor loop #402: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:41,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:44,357 | INFO     | monitor loop #403: job 0:6677919971 is in state 'finished'
[2025-06-05 11:26:06] 2025-06-05 09:25:44,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:06] 2025-06-05 09:25:46,782 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 11:26:06] 2025-06-05 09:25:46,782 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677919971/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:26:06] 2025-06-05 09:25:46,782 | INFO     | extracted standard info from prmon json
[2025-06-05 11:26:06] 2025-06-05 09:25:46,782 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:26:06] 2025-06-05 09:25:46,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:26:06] 2025-06-05 09:25:46,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:26:06] 2025-06-05 09:25:46,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:26:06] 2025-06-05 09:25:46,784 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:26:06] 2025-06-05 09:25:46,785 | INFO     | sum of square deviations: 136095575.0
[2025-06-05 11:26:06] 2025-06-05 09:25:46,785 | INFO     | sum of deviations: -7954269490.5
[2025-06-05 11:26:06] 2025-06-05 09:25:46,785 | INFO     | mean x: 1749113014.5
[2025-06-05 11:26:06] 2025-06-05 09:25:46,785 | INFO     | mean y: 2763842.197368421
[2025-06-05 11:26:06] 2025-06-05 09:25:46,785 | INFO     | -- intersect: 102231776700.7994
[2025-06-05 11:26:06] 2025-06-05 09:25:46,785 | INFO     | intersect: 102231776700.7994
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | chi2: 0.11786826101642263
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | -- intersect: 102231776700.7994
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | current memory leak: -58.45 B/s (using 76 data points, chi2=0.12)
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | ..............................
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | . Timing measurements:
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | . get job = 0 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,786 | INFO     | . initial setup = 4 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,787 | INFO     | . payload setup = 6 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,787 | INFO     | . stage-in = 0 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,787 | INFO     | . payload execution = 5034 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,787 | INFO     | . stage-out = 0 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,787 | INFO     | . log creation = 0 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,787 | INFO     | ..............................
[2025-06-05 11:26:06] 2025-06-05 09:25:46,889 | INFO     | 
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | job summary report
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | --------------------------------------------------
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | PanDA job id: 6677919971
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | task id: 45006595
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | errors: (none)
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | pilot state: finished 
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | transexitcode: 0
[2025-06-05 11:26:06] 2025-06-05 09:25:46,890 | INFO     | exeerrorcode: 0
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | exeerrordiag: 
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | exitcode: 0
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | exitmsg: OK
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | cpuconsumptiontime: 55842 s
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | nevents: 400
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | neventsw: 0
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | pid: 1677027
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | pgrp: 1677027
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | corecount: 12
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | event service: False
[2025-06-05 11:26:06] 2025-06-05 09:25:46,891 | INFO     | sizes: {0: 2397172, 1: 2397371, 4: 2397577, 11: 2397605, 5045: 2423713, 5047: 2432668, 5049: 2432852, 5134: 2433022}
[2025-06-05 11:26:06] 2025-06-05 09:25:46,892 | INFO     | --------------------------------------------------
[2025-06-05 11:26:06] 2025-06-05 09:25:46,892 | INFO     | 
[2025-06-05 11:26:06] 2025-06-05 09:25:46,892 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:26:06] 2025-06-05 09:25:46,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:26:06] 2025-06-05 09:25:46,910 | INFO     | job 6677919971 has completed (purged errors)
[2025-06-05 11:26:06] 2025-06-05 09:25:46,910 | INFO     | overall cleanup function is called
[2025-06-05 11:26:06] 2025-06-05 09:25:47,212 | INFO     | PID=1670391 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 11:26:06] 2025-06-05 09:25:47,918 | INFO     | --- collectZombieJob: --- 10, [1677027]
[2025-06-05 11:26:06] 2025-06-05 09:25:47,918 | INFO     | zombie collector waiting for pid 1677027
[2025-06-05 11:26:06] 2025-06-05 09:25:47,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:26:06] 2025-06-05 09:25:47,918 | INFO     | collected zombie processes
[2025-06-05 11:26:06] 2025-06-05 09:25:47,918 | INFO     | will attempt to kill all subprocesses of pid=1677027
[2025-06-05 11:26:06] 2025-06-05 09:25:47,995 | INFO     | process IDs to be killed: [1677027] (in reverse order)
[2025-06-05 11:26:06] 2025-06-05 09:25:48,039 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:26:06] 2025-06-05 09:25:48,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:26:06] 2025-06-05 09:25:48,042 | INFO     | did not find any defunct processes belonging to 1677027
[2025-06-05 11:26:06] 2025-06-05 09:25:48,044 | INFO     | did not find any defunct processes belonging to 1677027
[2025-06-05 11:26:06] 2025-06-05 09:25:48,044 | INFO     | ready for new job
[2025-06-05 11:26:06] 2025-06-05 09:25:48,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:26:06] 2025-06-05 09:25:48,046 | INFO     | **************************************
[2025-06-05 11:26:06] 2025-06-05 09:25:48,046 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:26:06] 2025-06-05 09:25:48,046 | INFO     | **************************************
[2025-06-05 11:26:06] 2025-06-05 09:25:48,046 | INFO     | 
[2025-06-05 11:26:06] 2025-06-05 09:25:48,067 | INFO     | architecture information:
[2025-06-05 11:26:06] 2025-06-05 09:25:48,067 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:26:06] 2025-06-05 09:25:48,078 | INFO     | cat /etc/os-release:
[2025-06-05 11:26:06] NAME="CentOS Linux"
[2025-06-05 11:26:06] VERSION="7 (Core)"
[2025-06-05 11:26:06] ID="centos"
[2025-06-05 11:26:06] ID_LIKE="rhel fedora"
[2025-06-05 11:26:06] VERSION_ID="7"
[2025-06-05 11:26:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:26:06] ANSI_COLOR="0;31"
[2025-06-05 11:26:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:26:06] HOME_URL="https://www.centos.org/"
[2025-06-05 11:26:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:26:06] 
[2025-06-05 11:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:26:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:26:06] 
[2025-06-05 11:26:06] 2025-06-05 09:25:48,078 | INFO     | **************************************
[2025-06-05 11:26:06] 2025-06-05 09:25:48,581 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 11:26:06] 2025-06-05 09:25:48,594 | INFO     | sufficient remaining disk space (32908509184 B)
[2025-06-05 11:26:06] 2025-06-05 09:25:48,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:26:06] 2025-06-05 09:25:48,594 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:26:06] 2025-06-05 09:25:48,595 | INFO     | update_server=False
[2025-06-05 11:26:06] 2025-06-05 09:25:48,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:26:06] 2025-06-05 09:25:48,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:26:06] 2025-06-05 09:25:48,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:26:06] 2025-06-05 09:25:48,595 | INFO     | aborting loop
[2025-06-05 11:26:06] 2025-06-05 09:25:48,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:26:06] 2025-06-05 09:25:48,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:26:06] 2025-06-05 09:25:48,955 | INFO     | all data control threads have been joined
[2025-06-05 11:26:06] 2025-06-05 09:25:49,218 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:26:06] 2025-06-05 09:25:49,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:26:06] 2025-06-05 09:25:49,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:26:06] 2025-06-05 09:25:49,579 | INFO     | all payload control threads have been joined
[2025-06-05 11:26:06] 2025-06-05 09:25:49,600 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:49,601 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:49,601 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:49,717 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:49,861 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:49,875 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:49,957 | INFO     | [data] control thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:50,141 | INFO     | all job control threads have been joined
[2025-06-05 11:26:06] 2025-06-05 09:25:50,150 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:50,465 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:50,581 | INFO     | [payload] control thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:50,597 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:50,625 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:51,032 | INFO     | [job] validate thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:51,145 | INFO     | [job] control thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:52,667 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:25:58,967 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:26:06] 2025-06-05 09:25:59,973 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:26:06] 2025-06-05 09:26:01,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407444879168)>', '<ExcThread(monitor, started 140406616475392)>']
[2025-06-05 11:26:06] 2025-06-05 09:26:02,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:26:06] 2025-06-05 09:26:02,274 | INFO     | [monitor] control thread has ended
[2025-06-05 11:26:06] 2025-06-05 09:26:06,640 | INFO     | all workflow threads have been joined
[2025-06-05 11:26:06] 2025-06-05 09:26:06,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:26:06] 2025-06-05 09:26:06,641 | INFO     | traces error code: 0
[2025-06-05 11:26:06] 2025-06-05 09:26:06,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:26:06] 2025-06-05 09:26:06,723 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:26:06] 2025-06-05 09:26:06,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:26:06] 2025-06-05 09:26:06,727 [wrapper] pilotpid: 1670391
[2025-06-05 11:26:06] 2025-06-05 09:26:06,729 [wrapper] Pilot exit status: 0
[2025-06-05 11:26:06] 2025-06-05 09:26:06,737 [wrapper] pandaids: 6677919971
[2025-06-05 11:26:06] 2025-06-05 09:26:06,764 [wrapper] cleanup supervisor_pilot 1688778 1670392
[2025-06-05 11:26:06] 2025-06-05 09:26:06,767 [wrapper] Test setup, not cleaning
[2025-06-05 11:26:06] 2025-06-05 09:26:06,769 [wrapper] apfmon messages muted
[2025-06-05 11:26:06] 2025-06-05 09:26:06,771 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:26:06] 2025-06-05 09:26:06,773 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:26:06]  *** Error codes and diagnostics ***
[2025-06-05 11:26:06]     "exeErrorCode": 0,
[2025-06-05 11:26:06]     "exeErrorDiag": "",
[2025-06-05 11:26:06]     "pilotErrorCode": 0,
[2025-06-05 11:26:06]     "pilotErrorDiag": "",
[2025-06-05 11:26:06]  *** Listing of results directory ***
[2025-06-05 11:26:06] total 388272
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-05 11:26:06] -rwx------ 1 boinc boinc     37140 Jun  3 20:13 runpilot2-wrapper.sh
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:13 queuedata.json
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc       100 Jun  5 09:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:26:06] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 09:59 run_atlas
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc       105 Jun  5 09:59 job.xml
[2025-06-05 11:26:06] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:59 start_atlas.sh
[2025-06-05 11:26:06] drwxrwx--x 2 boinc boinc      4096 Jun  5 09:59 shared
[2025-06-05 11:26:06] -rw-r--r-- 2 boinc boinc    508873 Jun  5 09:59 input.tar.gz
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc      6048 Jun  5 09:59 init_data.xml
[2025-06-05 11:26:06] -rw-r--r-- 2 boinc boinc 215344789 Jun  5 09:59 EVNT.45006593._001681.pool.root.1
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc         0 Jun  5 09:59 boinc_lockfile
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc      2522 Jun  5 09:59 pandaJob.out
[2025-06-05 11:26:06] -rw------- 1 boinc boinc    983087 Jun  5 09:59 agis_schedconf.cvmfs.json
[2025-06-05 11:26:06] -rw------- 1 boinc boinc   1598969 Jun  5 09:59 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:26:06] drwx------ 4 boinc boinc      4096 Jun  5 09:59 pilot3
[2025-06-05 11:26:06] -rw------- 1 boinc boinc 176734096 Jun  5 11:23 HITS.45006595._041897.pool.root.1
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc       530 Jun  5 11:24 boinc_task_state.xml
[2025-06-05 11:26:06] -rw------- 1 boinc boinc      1065 Jun  5 11:24 memory_monitor_summary.json
[2025-06-05 11:26:06] -rw------- 1 boinc boinc    353528 Jun  5 11:24 log.45006595._041897.job.log.tgz.1
[2025-06-05 11:26:06] -rw------- 1 boinc boinc        95 Jun  5 11:25 pilot_heartbeat.json
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc      8192 Jun  5 11:25 boinc_mmap_file
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc        27 Jun  5 11:25 wrapper_checkpoint.txt
[2025-06-05 11:26:06] -rw------- 1 boinc boinc      7733 Jun  5 11:25 heartbeat.json
[2025-06-05 11:26:06] -rw------- 1 boinc boinc      4432 Jun  5 11:26 pilotlog.txt
[2025-06-05 11:26:06] -rw------- 1 boinc boinc    483840 Jun  5 11:26 log.45006595._041897.job.log.1
[2025-06-05 11:26:06] -rw------- 1 boinc boinc       357 Jun  5 11:26 output.list
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc       620 Jun  5 11:26 runtime_log
[2025-06-05 11:26:06] -rw------- 1 boinc boinc    860160 Jun  5 11:26 result.tar.gz
[2025-06-05 11:26:06] -rw------- 1 boinc boinc       654 Jun  5 11:26 sgRKDmBKlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTclKDm273dcn.diag
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc      8716 Jun  5 11:26 runtime_log.err
[2025-06-05 11:26:06] -rw-r--r-- 1 boinc boinc     22294 Jun  5 11:26 stderr.txt
[2025-06-05 11:26:06] HITS file was successfully produced:
[2025-06-05 11:26:06] -rw------- 1 boinc boinc 176734096 Jun  5 11:23 shared/HITS.pool.root.1
[2025-06-05 11:26:06]  *** Contents of shared directory: ***
[2025-06-05 11:26:06] total 384256
[2025-06-05 11:26:06] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:59 start_atlas.sh
[2025-06-05 11:26:06] -rw-r--r-- 2 boinc boinc    508873 Jun  5 09:59 input.tar.gz
[2025-06-05 11:26:06] -rw-r--r-- 2 boinc boinc 215344789 Jun  5 09:59 ATLAS.root_0
[2025-06-05 11:26:06] -rw------- 1 boinc boinc 176734096 Jun  5 11:23 HITS.pool.root.1
[2025-06-05 11:26:06] -rw------- 1 boinc boinc    860160 Jun  5 11:26 result.tar.gz
11:26:08 (1666673): run_atlas exited; CPU time 55675.546828
11:26:08 (1666673): called boinc_finish(0)

</stderr_txt>
]]>

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