Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:02:50 (432837): wrapper (7.7.26015): starting
07:02:50 (432837): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 07:02:50] Arguments: --nthreads 3
[2025-06-04 07:02:50] Threads: 3
[2025-06-04 07:02:50] Checking for CVMFS
[2025-06-04 07:02:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:02:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:02:50] 2.9.2.0 9340 1421 65268 146768 0 55 28809634 36864000 0 130560 0 1141926 99.993 303249 34242 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 07:02:50] CVMFS is ok
[2025-06-04 07:02:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:02:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:02:50] Further information can be found at the LHC@home message board.
[2025-06-04 07:02:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:02:50] Checking for apptainer binary...
[2025-06-04 07:02:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:02:50] Running /usr/bin/apptainer --version
[2025-06-04 07:02:50] apptainer version 1.3.6-6.1
[2025-06-04 07:02:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:02:50] atlasA141
[2025-06-04 07:02:50] apptainer works
[2025-06-04 07:02:50] Set ATHENA_PROC_NUMBER=3
[2025-06-04 07:02:50] Set ATHENA_CORE_NUMBER=3
[2025-06-04 07:02:50] Starting ATLAS job with PandaID=6677782379
[2025-06-04 07:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:24:24]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:24:24]  lfn=log.45006595._038923.job.log.tgz.1
[2025-06-04 08:24:24]  mtime=0
[2025-06-04 08:24:24]  protocol_id=None
[2025-06-04 08:24:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:24:24]  replicas=None
[2025-06-04 08:24:24]  scope=mc23_13p6TeV
[2025-06-04 08:24:24]  status=None
[2025-06-04 08:24:24]  status_code=0
[2025-06-04 08:24:24]  storage_token=
[2025-06-04 08:24:24]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677782379/log.45006595._038923.job.log.tgz.1
[2025-06-04 08:24:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/6e/log.45006595._038923.job.log.tgz.1
[2025-06-04 08:24:24]  workdir=None
[2025-06-04 08:24:24] ]
[2025-06-04 08:24:24] 2025-06-04 06:23:55,859 | INFO     | transferring file log.45006595._038923.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677782379/log.45006595._038923.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 08:24:24] 2025-06-04 06:23:55,859 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677782379/log.45006595._038923.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0389
[2025-06-04 08:24:24] 2025-06-04 06:23:55,872 | INFO     | adding to output.list: log.45006595._038923.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/6e/log.45006595._038923.job.log.tg
[2025-06-04 08:24:24] 2025-06-04 06:23:55,873 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:24:24] 2025-06-04 06:23:55,873 | INFO     | summary of transferred files:
[2025-06-04 08:24:24] 2025-06-04 06:23:55,873 | INFO     |  -- lfn=log.45006595._038923.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:24:24] 2025-06-04 06:23:55,873 | INFO     | stage-out finished correctly
[2025-06-04 08:24:24] 2025-06-04 06:23:58,226 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:24:24] 2025-06-04 06:23:58,721 | INFO     | job 6677782379 has state=finished
[2025-06-04 08:24:24] 2025-06-04 06:23:58,722 | INFO     | preparing for final server update for job 6677782379 in state='finished'
[2025-06-04 08:24:24] 2025-06-04 06:23:58,723 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:24:24] 2025-06-04 06:23:58,723 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:24:24] 2025-06-04 06:23:58,723 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:24:24] 2025-06-04 06:23:58,723 | INFO     | job 6677782379 has finished - writing final server update
[2025-06-04 08:24:24] 2025-06-04 06:23:58,724 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:24:24] 2025-06-04 06:23:58,727 | INFO     | executing command: lscpu
[2025-06-04 08:24:24] 2025-06-04 06:23:58,745 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:24:24] 2025-06-04 06:24:01,841 | WARNING  | process 442998 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:24:24] 2025-06-04 06:24:01,841 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677782379/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:24:24] 2025-06-04 06:24:01,880 | INFO     | number of running child processes to parent process 442998: 1
[2025-06-04 08:24:24] 2025-06-04 06:24:01,880 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:24:24] 2025-06-04 06:24:04,383 | INFO     | monitor loop #375: job 0:6677782379 is in state 'finished'
[2025-06-04 08:24:24] 2025-06-04 06:24:04,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:24:24] 2025-06-04 06:24:05,023 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:24:24] 2025-06-04 06:24:05,023 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677782379/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:24:24] 2025-06-04 06:24:05,023 | INFO     | extracted standard info from prmon json
[2025-06-04 08:24:24] 2025-06-04 06:24:05,023 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:24:24] 2025-06-04 06:24:05,023 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:24:24] 2025-06-04 06:24:05,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:24:24] 2025-06-04 06:24:05,024 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:24:24] 2025-06-04 06:24:05,024 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:24:24] 2025-06-04 06:24:05,024 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | sum of deviations: -4748186259.0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | mean x: 1749015909.0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | mean y: 2389999.3561643837
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | -- intersect: 68860644012.51471
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | intersect: 68860644012.51471
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | chi2: 0.11724375525074339
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | -- intersect: 68860644012.51471
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | current memory leak: -39.37 B/s (using 73 data points, chi2=0.12)
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | ..............................
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . Timing measurements:
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . get job = 0 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . initial setup = 1 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . payload setup = 6 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . stage-in = 0 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . payload execution = 4827 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . stage-out = 0 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | . log creation = 0 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,025 | INFO     | ..............................
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | 
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | job summary report
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | --------------------------------------------------
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | PanDA job id: 6677782379
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | task id: 45006595
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | errors: (none)
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | pilot state: finished 
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | transexitcode: 0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | exeerrorcode: 0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | exeerrordiag: 
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | exitcode: 0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,057 | INFO     | exitmsg: OK
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | cpuconsumptiontime: 13854 s
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | nevents: 400
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | neventsw: 0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | pid: 442998
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | pgrp: 442998
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | corecount: 3
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | event service: False
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | sizes: {0: 2405187, 6: 2405393, 11: 2405421, 4838: 2440567, 4840: 2440567, 4847: 2440737}
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | --------------------------------------------------
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | 
[2025-06-04 08:24:24] 2025-06-04 06:24:05,058 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:24:24] 2025-06-04 06:24:05,070 | INFO     | job 6677782379 has completed (purged errors)
[2025-06-04 08:24:24] 2025-06-04 06:24:05,071 | INFO     | overall cleanup function is called
[2025-06-04 08:24:24] 2025-06-04 06:24:05,763 | INFO     | PID=436483 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 08:24:24] 2025-06-04 06:24:06,076 | INFO     | --- collectZombieJob: --- 10, [442998]
[2025-06-04 08:24:24] 2025-06-04 06:24:06,076 | INFO     | zombie collector waiting for pid 442998
[2025-06-04 08:24:24] 2025-06-04 06:24:06,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:24:24] 2025-06-04 06:24:06,077 | INFO     | collected zombie processes
[2025-06-04 08:24:24] 2025-06-04 06:24:06,077 | INFO     | will attempt to kill all subprocesses of pid=442998
[2025-06-04 08:24:24] 2025-06-04 06:24:06,116 | INFO     | process IDs to be killed: [442998] (in reverse order)
[2025-06-04 08:24:24] 2025-06-04 06:24:06,141 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:24:24] 2025-06-04 06:24:06,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:24:24] 2025-06-04 06:24:06,143 | INFO     | did not find any defunct processes belonging to 442998
[2025-06-04 08:24:24] 2025-06-04 06:24:06,143 | INFO     | did not find any defunct processes belonging to 442998
[2025-06-04 08:24:24] 2025-06-04 06:24:06,144 | INFO     | ready for new job
[2025-06-04 08:24:24] 2025-06-04 06:24:06,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:24:24] 2025-06-04 06:24:06,144 | INFO     | **************************************
[2025-06-04 08:24:24] 2025-06-04 06:24:06,144 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:24:24] 2025-06-04 06:24:06,144 | INFO     | **************************************
[2025-06-04 08:24:24] 2025-06-04 06:24:06,144 | INFO     | 
[2025-06-04 08:24:24] 2025-06-04 06:24:06,145 | INFO     | architecture information:
[2025-06-04 08:24:24] 2025-06-04 06:24:06,145 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:24:24] 2025-06-04 06:24:06,155 | INFO     | cat /etc/os-release:
[2025-06-04 08:24:24] NAME="CentOS Linux"
[2025-06-04 08:24:24] VERSION="7 (Core)"
[2025-06-04 08:24:24] ID="centos"
[2025-06-04 08:24:24] ID_LIKE="rhel fedora"
[2025-06-04 08:24:24] VERSION_ID="7"
[2025-06-04 08:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:24:24] ANSI_COLOR="0;31"
[2025-06-04 08:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:24:24] HOME_URL="https://www.centos.org/"
[2025-06-04 08:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:24:24] 
[2025-06-04 08:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:24:24] 
[2025-06-04 08:24:24] 2025-06-04 06:24:06,155 | INFO     | **************************************
[2025-06-04 08:24:24] 2025-06-04 06:24:06,658 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | INFO     | sufficient remaining disk space (326927122432 B)
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | INFO     | update_server=False
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:24:24] 2025-06-04 06:24:06,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:24:24] 2025-06-04 06:24:06,672 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:24:24] 2025-06-04 06:24:06,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:24:24] 2025-06-04 06:24:06,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:24:24] 2025-06-04 06:24:06,886 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:24:24] 2025-06-04 06:24:06,887 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:24:24] 2025-06-04 06:24:06,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:24:24] 2025-06-04 06:24:06,887 | INFO     | will abort loop
[2025-06-04 08:24:24] 2025-06-04 06:24:07,278 | INFO     | all data control threads have been joined
[2025-06-04 08:24:24] 2025-06-04 06:24:07,677 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:07,678 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:07,678 | INFO     | all job control threads have been joined
[2025-06-04 08:24:24] 2025-06-04 06:24:07,805 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:07,878 | INFO     | all payload control threads have been joined
[2025-06-04 08:24:24] 2025-06-04 06:24:07,893 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:07,966 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,096 | INFO     | [job] validate thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,284 | INFO     | [data] control thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,366 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,518 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,577 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,678 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,684 | INFO     | [job] control thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:08,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:24:24] 2025-06-04 06:24:08,884 | INFO     | [payload] control thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:09,070 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:12,776 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:17,254 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:24:24] 2025-06-04 06:24:18,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:24:24] 2025-06-04 06:24:19,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644560013120)>', '<ExcThread(monitor, started 140643930203904)>']
[2025-06-04 08:24:24] 2025-06-04 06:24:20,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:24:24] 2025-06-04 06:24:20,748 | INFO     | [monitor] control thread has ended
[2025-06-04 08:24:24] 2025-06-04 06:24:24,805 | INFO     | all workflow threads have been joined
[2025-06-04 08:24:24] 2025-06-04 06:24:24,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:24:24] 2025-06-04 06:24:24,806 | INFO     | traces error code: 0
[2025-06-04 08:24:24] 2025-06-04 06:24:24,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:24:24] 2025-06-04 06:24:24,853 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:24:24] 2025-06-04 06:24:24,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:24:24] 2025-06-04 06:24:24,859 [wrapper] pilotpid: 436483
[2025-06-04 08:24:24] 2025-06-04 06:24:24,861 [wrapper] Pilot exit status: 0
[2025-06-04 08:24:24] 2025-06-04 06:24:24,869 [wrapper] pandaids: 6677782379
[2025-06-04 08:24:24] 2025-06-04 06:24:24,886 [wrapper] cleanup supervisor_pilot  455022 436484
[2025-06-04 08:24:24] 2025-06-04 06:24:24,889 [wrapper] Test setup, not cleaning
[2025-06-04 08:24:24] 2025-06-04 06:24:24,892 [wrapper] apfmon messages muted
[2025-06-04 08:24:24] 2025-06-04 06:24:24,895 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:24:24] 2025-06-04 06:24:24,898 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:24:24]  *** Error codes and diagnostics ***
[2025-06-04 08:24:24]     "exeErrorCode": 0,
[2025-06-04 08:24:24]     "exeErrorDiag": "",
[2025-06-04 08:24:24]     "pilotErrorCode": 0,
[2025-06-04 08:24:24]     "pilotErrorDiag": "",
[2025-06-04 08:24:24]  *** Listing of results directory ***
[2025-06-04 08:24:24] total 387592
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:42 queuedata.json
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 08:24:24] -rwx------ 1 boinc boinc     37140 Jun  3 18:43 runpilot2-wrapper.sh
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc       100 Jun  4 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:24:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 07:02 run_atlas
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc       105 Jun  4 07:02 job.xml
[2025-06-04 08:24:24] -rw-r--r-- 2 boinc boinc 213151324 Jun  4 07:02 EVNT.45006593._001561.pool.root.1
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc      6683 Jun  4 07:02 init_data.xml
[2025-06-04 08:24:24] drwxrwx--x 2 boinc boinc      4096 Jun  4 07:02 shared
[2025-06-04 08:24:24] -rw-r--r-- 2 boinc boinc    508881 Jun  4 07:02 input.tar.gz
[2025-06-04 08:24:24] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:02 start_atlas.sh
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc         0 Jun  4 07:02 boinc_lockfile
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc      2525 Jun  4 07:02 pandaJob.out
[2025-06-04 08:24:24] -rw------- 1 boinc boinc    986745 Jun  4 07:03 agis_schedconf.cvmfs.json
[2025-06-04 08:24:24] -rw------- 1 boinc boinc   1603667 Jun  4 07:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:24:24] drwx------ 4 boinc boinc      4096 Jun  4 07:03 pilot3
[2025-06-04 08:24:24] -rw------- 1 boinc boinc        95 Jun  4 08:23 pilot_heartbeat.json
[2025-06-04 08:24:24] -rw------- 1 boinc boinc 178507395 Jun  4 08:23 HITS.45006595._038923.pool.root.1
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc       529 Jun  4 08:23 boinc_task_state.xml
[2025-06-04 08:24:24] -rw------- 1 boinc boinc      1018 Jun  4 08:23 memory_monitor_summary.json
[2025-06-04 08:24:24] -rw------- 1 boinc boinc    230652 Jun  4 08:23 log.45006595._038923.job.log.tgz.1
[2025-06-04 08:24:24] -rw------- 1 boinc boinc      7655 Jun  4 08:24 heartbeat.json
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:24 boinc_mmap_file
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc        27 Jun  4 08:24 wrapper_checkpoint.txt
[2025-06-04 08:24:24] -rw------- 1 boinc boinc      4738 Jun  4 08:24 pilotlog.txt
[2025-06-04 08:24:24] -rw------- 1 boinc boinc    472540 Jun  4 08:24 log.45006595._038923.job.log.1
[2025-06-04 08:24:24] -rw------- 1 boinc boinc       357 Jun  4 08:24 output.list
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:24 runtime_log
[2025-06-04 08:24:24] -rw------- 1 boinc boinc    716800 Jun  4 08:24 result.tar.gz
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc      8748 Jun  4 08:24 runtime_log.err
[2025-06-04 08:24:24] -rw------- 1 boinc boinc       661 Jun  4 08:24 QrZLDmFujg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd6kKDmfZscum.diag
[2025-06-04 08:24:24] -rw-r--r-- 1 boinc boinc     21622 Jun  4 08:24 stderr.txt
[2025-06-04 08:24:24] HITS file was successfully produced:
[2025-06-04 08:24:24] -rw------- 1 boinc boinc 178507395 Jun  4 08:23 shared/HITS.pool.root.1
[2025-06-04 08:24:24]  *** Contents of shared directory: ***
[2025-06-04 08:24:24] total 383704
[2025-06-04 08:24:24] -rw-r--r-- 2 boinc boinc 213151324 Jun  4 07:02 ATLAS.root_0
[2025-06-04 08:24:24] -rw-r--r-- 2 boinc boinc    508881 Jun  4 07:02 input.tar.gz
[2025-06-04 08:24:24] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:02 start_atlas.sh
[2025-06-04 08:24:24] -rw------- 1 boinc boinc 178507395 Jun  4 08:23 HITS.pool.root.1
[2025-06-04 08:24:24] -rw------- 1 boinc boinc    716800 Jun  4 08:24 result.tar.gz
08:24:26 (432837): run_atlas exited; CPU time 13877.500974
08:24:26 (432837): called boinc_finish(0)

</stderr_txt>
]]>

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