Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:02 (13511): wrapper (7.7.26015): starting
09:44:02 (13511): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:44:02] Arguments: --nthreads 8
[2025-06-04 09:44:02] Threads: 8
[2025-06-04 09:44:02] Checking for CVMFS
[2025-06-04 09:44:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:44:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:44:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:44:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:44:03] 2.11.2.0 17834 32942 89088 146772 3 69 19941491 25165825 3519 130560 0 18246967 99.802 20250919 2130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:44:03] CVMFS is ok
[2025-06-04 09:44:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:44:03] Checking for apptainer binary...
[2025-06-04 09:44:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:44:03] Running /usr/bin/apptainer --version
[2025-06-04 09:44:03] apptainer version 1.3.2-1.el7
[2025-06-04 09:44:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:54:00] cg-vwn466.simple-grid.lan
[2025-06-04 09:54:00] apptainer works
[2025-06-04 09:54:00] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:54:00] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:54:00] Starting ATLAS job with PandaID=6677917776
[2025-06-04 09:54:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:47:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:47:29] 2025-06-04 11:29:41,513 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:47:29] 2025-06-04 11:29:41,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:47:29] 2025-06-04 11:29:41,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:47:29] 2025-06-04 11:29:41,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:47:29] 2025-06-04 11:29:41,518 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:47:29] 2025-06-04 11:29:41,518 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,520 | INFO     | sum of deviations: 63510319122.49999
[2025-06-04 15:47:29] 2025-06-04 11:29:41,520 | INFO     | mean x: 1749030354.5
[2025-06-04 15:47:29] 2025-06-04 11:29:41,520 | INFO     | mean y: 2421511.695
[2025-06-04 15:47:29] 2025-06-04 11:29:41,520 | INFO     | -- intersect: -44777578384.39255
[2025-06-04 15:47:29] 2025-06-04 11:29:41,520 | INFO     | intersect: -44777578384.39255
[2025-06-04 15:47:29] 2025-06-04 11:29:41,521 | INFO     | chi2: 5.375594588767208
[2025-06-04 15:47:29] 2025-06-04 11:29:41,521 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,522 | INFO     | sum of deviations: 75517904595.99997
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | mean x: 1749030202.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | mean y: 2431368.0820512823
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | -- intersect: -57445765671.41336
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | intersect: -57445765671.41336
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | chi2: 4.570288150479277
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | current chi2=4.570288150479277 (change=14.980788171241407 %)
[2025-06-04 15:47:29] 2025-06-04 11:29:41,523 | INFO     | right removable region: 194
[2025-06-04 15:47:29] 2025-06-04 11:29:41,524 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,525 | INFO     | sum of deviations: 13878964.000001907
[2025-06-04 15:47:29] 2025-06-04 11:29:41,525 | INFO     | mean x: 1749030507.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,525 | INFO     | mean y: 2474781.4512820514
[2025-06-04 15:47:29] 2025-06-04 11:29:41,525 | INFO     | -- intersect: -8083265.701646985
[2025-06-04 15:47:29] 2025-06-04 11:29:41,525 | INFO     | intersect: -8083265.701646985
[2025-06-04 15:47:29] 2025-06-04 11:29:41,526 | INFO     | chi2: 1.3227815623841106
[2025-06-04 15:47:29] 2025-06-04 11:29:41,526 | INFO     | current chi2=1.3227815623841106 (change=75.39283254082846 %)
[2025-06-04 15:47:29] 2025-06-04 11:29:41,526 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | sum of deviations: -15014726629.499996
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | mean x: 1749030659.5
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | mean y: 2487916.542105263
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | -- intersect: 12350233017.819391
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | intersect: 12350233017.819391
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | chi2: 0.9256663800247993
[2025-06-04 15:47:29] 2025-06-04 11:29:41,528 | INFO     | current chi2=0.9256663800247993 (change=30.021221466344915 %)
[2025-06-04 15:47:29] 2025-06-04 11:29:41,529 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,530 | INFO     | sum of deviations: -8663088483.999998
[2025-06-04 15:47:29] 2025-06-04 11:29:41,530 | INFO     | mean x: 1749030812.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,530 | INFO     | mean y: 2481985.6864864863
[2025-06-04 15:47:29] 2025-06-04 11:29:41,530 | INFO     | -- intersect: 7720206832.673646
[2025-06-04 15:47:29] 2025-06-04 11:29:41,530 | INFO     | intersect: 7720206832.673646
[2025-06-04 15:47:29] 2025-06-04 11:29:41,531 | INFO     | chi2: 0.8907135748492669
[2025-06-04 15:47:29] 2025-06-04 11:29:41,531 | INFO     | current chi2=0.8907135748492669 (change=3.7759613970851933 %)
[2025-06-04 15:47:29] 2025-06-04 11:29:41,531 | INFO     | left removable region: 30
[2025-06-04 15:47:29] 2025-06-04 11:29:41,531 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,532 | INFO     | sum of deviations: 2685795565.5000005
[2025-06-04 15:47:29] 2025-06-04 11:29:41,532 | INFO     | mean x: 1749031086.5
[2025-06-04 15:47:29] 2025-06-04 11:29:41,533 | INFO     | mean y: 2496009.9329268294
[2025-06-04 15:47:29] 2025-06-04 11:29:41,533 | INFO     | -- intersect: -3432107902.458466
[2025-06-04 15:47:29] 2025-06-04 11:29:41,533 | INFO     | intersect: -3432107902.458466
[2025-06-04 15:47:29] 2025-06-04 11:29:41,533 | INFO     | chi2: 0.0002755669770760472
[2025-06-04 15:47:29] 2025-06-04 11:29:41,533 | INFO     | -- intersect: -3432107902.458466
[2025-06-04 15:47:29] 2025-06-04 11:29:41,533 | INFO     | current memory leak: 1.96 B/s (using 164 data points, chi2=0.00)
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | ..............................
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | . Timing measurements:
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | . get job = 0 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | . initial setup = 6 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | . payload setup = 150 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | . stage-in = 0 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,534 | INFO     | . payload execution = 12344 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,535 | INFO     | . stage-out = 3 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,535 | INFO     | . log creation = 1 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,535 | INFO     | ..............................
[2025-06-04 15:47:29] 2025-06-04 11:29:41,664 | INFO     | 
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | job summary report
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | --------------------------------------------------
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | PanDA job id: 6677917776
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | task id: 45006595
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | errors: (none)
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | pilot state: finished 
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | transexitcode: 0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,665 | INFO     | exeerrorcode: 0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | exeerrordiag: 
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | exitcode: 0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | exitmsg: OK
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | cpuconsumptiontime: 45356 s
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | nevents: 400
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | neventsw: 0
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | pid: 32338
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | pgrp: 32338
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | corecount: 8
[2025-06-04 15:47:29] 2025-06-04 11:29:41,666 | INFO     | event service: False
[2025-06-04 15:47:29] 2025-06-04 11:29:41,667 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 65: 2405508, 76: 2405536, 87: 2405592, 89: 2405826, 98: 2406134, 1
[2025-06-04 15:47:29] 2025-06-04 11:29:41,667 | INFO     | --------------------------------------------------
[2025-06-04 15:47:29] 2025-06-04 11:29:41,667 | INFO     | 
[2025-06-04 15:47:29] 2025-06-04 11:29:41,667 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 15:47:29] 2025-06-04 11:29:42,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:47:29] 2025-06-04 11:29:42,157 | INFO     | job 6677917776 has completed (purged errors)
[2025-06-04 15:47:29] 2025-06-04 11:29:42,157 | INFO     | overall cleanup function is called
[2025-06-04 15:47:29] 2025-06-04 11:29:43,166 | INFO     | --- collectZombieJob: --- 10, [32338]
[2025-06-04 15:47:29] 2025-06-04 11:29:43,167 | INFO     | zombie collector waiting for pid 32338
[2025-06-04 15:47:29] 2025-06-04 11:29:43,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:47:29] 2025-06-04 11:29:43,167 | INFO     | collected zombie processes
[2025-06-04 15:47:29] 2025-06-04 11:29:43,167 | INFO     | will attempt to kill all subprocesses of pid=32338
[2025-06-04 15:47:29] 2025-06-04 11:29:43,269 | INFO     | process IDs to be killed: [32338] (in reverse order)
[2025-06-04 15:47:29] 2025-06-04 11:29:44,362 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:47:29] 2025-06-04 11:29:44,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:47:29] 2025-06-04 11:29:44,365 | INFO     | did not find any defunct processes belonging to 32338
[2025-06-04 15:47:29] 2025-06-04 11:29:44,377 | INFO     | did not find any defunct processes belonging to 32338
[2025-06-04 15:47:29] 2025-06-04 11:29:44,377 | INFO     | ready for new job
[2025-06-04 15:47:29] 2025-06-04 11:29:44,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:47:29] 2025-06-04 11:29:44,379 | INFO     | **************************************
[2025-06-04 15:47:29] 2025-06-04 11:29:44,379 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:47:29] 2025-06-04 11:29:44,379 | INFO     | **************************************
[2025-06-04 15:47:29] 2025-06-04 11:29:44,379 | INFO     | 
[2025-06-04 15:47:29] 2025-06-04 11:29:44,380 | INFO     | pilot is running in a VM
[2025-06-04 15:47:29] 2025-06-04 11:29:44,380 | INFO     | architecture information:
[2025-06-04 15:47:29] 2025-06-04 11:29:44,387 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:47:29] 2025-06-04 11:29:44,639 | INFO     | cat /etc/os-release:
[2025-06-04 15:47:29] NAME="CentOS Linux"
[2025-06-04 15:47:29] VERSION="7 (Core)"
[2025-06-04 15:47:29] ID="centos"
[2025-06-04 15:47:29] ID_LIKE="rhel fedora"
[2025-06-04 15:47:29] VERSION_ID="7"
[2025-06-04 15:47:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:47:29] ANSI_COLOR="0;31"
[2025-06-04 15:47:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:47:29] HOME_URL="https://www.centos.org/"
[2025-06-04 15:47:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:47:29] 
[2025-06-04 15:47:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:47:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:47:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:47:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:47:29] 
[2025-06-04 15:47:29] 2025-06-04 11:29:44,639 | INFO     | **************************************
[2025-06-04 15:47:29] 2025-06-04 11:29:45,142 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 15:47:29] 2025-06-04 11:29:45,349 | INFO     | sufficient remaining disk space (496906534912 B)
[2025-06-04 15:47:29] 2025-06-04 11:29:45,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:47:29] 2025-06-04 11:29:45,349 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:47:29] 2025-06-04 11:29:45,350 | INFO     | update_server=False
[2025-06-04 15:47:29] 2025-06-04 11:29:45,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:47:29] 2025-06-04 11:29:45,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:47:29] 2025-06-04 11:29:45,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:47:29] 2025-06-04 11:29:45,624 | INFO     | aborting loop
[2025-06-04 15:47:29] 2025-06-04 11:29:46,047 | INFO     | all data control threads have been joined
[2025-06-04 15:47:29] 2025-06-04 11:29:46,059 | INFO     | all payload control threads have been joined
[2025-06-04 15:47:29] 2025-06-04 11:29:46,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:47:29] 2025-06-04 11:29:46,230 | INFO     | PID=21936 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 15:47:29] 2025-06-04 11:29:46,233 | INFO     | .. there are 9 such processes running
[2025-06-04 15:47:29] 2025-06-04 11:29:46,234 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:47:29] 2025-06-04 11:29:46,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:47:29] 2025-06-04 11:29:46,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:47:29] 2025-06-04 11:29:46,296 | INFO     | all job control threads have been joined
[2025-06-04 15:47:29] 2025-06-04 11:29:46,354 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:46,478 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:46,629 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:46,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:47:29] 2025-06-04 11:29:46,981 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,053 | INFO     | [data] control thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,065 | INFO     | [payload] control thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,302 | INFO     | [job] control thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,355 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,502 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,594 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,605 | INFO     | [job] validate thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,688 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,714 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:47,737 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:50,074 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:47:29] 2025-06-04 11:29:51,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747328907072)>', '<ExcThread(monitor, started 139746743408384)>']
[2025-06-04 15:47:29] 2025-06-04 11:29:52,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:47:29] 2025-06-04 11:29:52,269 | INFO     | [monitor] control thread has ended
[2025-06-04 15:47:29] 2025-06-04 11:29:56,885 | INFO     | all workflow threads have been joined
[2025-06-04 15:47:29] 2025-06-04 11:29:56,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:47:29] 2025-06-04 11:29:56,886 | INFO     | traces error code: 0
[2025-06-04 15:47:29] 2025-06-04 11:29:56,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:47:29] 2025-06-04 11:29:57,291 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:47:29] 2025-06-04 11:29:57,385 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:47:29] 2025-06-04 11:29:57,519 [wrapper] pilotpid: 21936
[2025-06-04 15:47:29] 2025-06-04 11:29:57,631 [wrapper] Pilot exit status: 0
[2025-06-04 15:47:29] 2025-06-04 11:29:58,060 [wrapper] pandaids: 6677917776
[2025-06-04 15:47:29] 2025-06-04 11:29:58,792 [wrapper] cleanup supervisor_pilot 20830 21937
[2025-06-04 15:47:29] 2025-06-04 11:29:58,903 [wrapper] Test setup, not cleaning
[2025-06-04 15:47:29] 2025-06-04 11:29:58,968 [wrapper] apfmon messages muted
[2025-06-04 15:47:29] 2025-06-04 11:29:59,066 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:47:29] 2025-06-04 11:29:59,128 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:47:29]  *** Error codes and diagnostics ***
[2025-06-04 15:47:29]     "exeErrorCode": 0,
[2025-06-04 15:47:29]     "exeErrorDiag": "",
[2025-06-04 15:47:29]     "pilotErrorCode": 0,
[2025-06-04 15:47:29]     "pilotErrorDiag": "",
[2025-06-04 15:47:29]  *** Listing of results directory ***
[2025-06-04 15:47:29] total 396092
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:56 queuedata.json
[2025-06-04 15:47:29] -rwx------. 1 boinc boinc     37140 Jun  3 19:56 runpilot2-wrapper.sh
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:47:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:44 run_atlas
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:44 job.xml
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc      6392 Jun  4 09:44 init_data.xml
[2025-06-04 15:47:29] -rw-r--r--. 2 boinc boinc 216910548 Jun  4 09:44 EVNT.45006593._001653.pool.root.1
[2025-06-04 15:47:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:44 start_atlas.sh
[2025-06-04 15:47:29] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:44 shared
[2025-06-04 15:47:29] -rw-r--r--. 2 boinc boinc    508877 Jun  4 09:44 input.tar.gz
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:44 boinc_lockfile
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc      2525 Jun  4 09:54 pandaJob.out
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc    986745 Jun  4 09:56 agis_schedconf.cvmfs.json
[2025-06-04 15:47:29] drwx------. 4 boinc boinc      4096 Jun  4 09:56 pilot3
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc 181904269 Jun  4 13:26 HITS.45006595._041283.pool.root.1
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:27 boinc_task_state.xml
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc      1017 Jun  4 13:28 memory_monitor_summary.json
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc   1603667 Jun  4 13:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc    372988 Jun  4 13:28 log.45006595._041283.job.log.tgz.1
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc        95 Jun  4 13:28 pilot_heartbeat.json
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc      7687 Jun  4 13:29 heartbeat.json
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc      4808 Jun  4 13:29 pilotlog.txt
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc   1106290 Jun  4 13:29 log.45006595._041283.job.log.1
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc       357 Jun  4 13:30 output.list
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:30 runtime_log
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc   1495040 Jun  4 13:30 result.tar.gz
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc      8659 Jun  4 13:30 runtime_log.err
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc       657 Jun  4 13:30 obOKDmN3kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlVZKDmT0crBn.diag
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:47 boinc_mmap_file
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:47 wrapper_checkpoint.txt
[2025-06-04 15:47:29] -rw-r--r--. 1 boinc boinc     20595 Jun  4 15:47 stderr.txt
[2025-06-04 15:47:29] HITS file was successfully produced:
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc 181904269 Jun  4 13:26 shared/HITS.pool.root.1
[2025-06-04 15:47:29]  *** Contents of shared directory: ***
[2025-06-04 15:47:29] total 391448
[2025-06-04 15:47:29] -rw-r--r--. 2 boinc boinc 216910548 Jun  4 09:44 ATLAS.root_0
[2025-06-04 15:47:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:44 start_atlas.sh
[2025-06-04 15:47:29] -rw-r--r--. 2 boinc boinc    508877 Jun  4 09:44 input.tar.gz
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc 181904269 Jun  4 13:26 HITS.pool.root.1
[2025-06-04 15:47:29] -rw-------. 1 boinc boinc   1495040 Jun  4 13:30 result.tar.gz
15:47:31 (13511): run_atlas exited; CPU time 45516.686577
15:47:31 (13511): called boinc_finish(0)

</stderr_txt>
]]>

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