Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:34:24 (557418): wrapper (7.7.26015): starting
06:34:24 (557418): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 06:34:24] Arguments: --nthreads 4
[2025-06-04 06:34:24] Threads: 4
[2025-06-04 06:34:24] Checking for CVMFS
[2025-06-04 06:34:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:34:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:34:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:34:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:34:24] 2.9.2.0 9870 1417 89732 146767 0 56 30038688 36864000 0 130560 0 1464482 99.994 302048 33968 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 06:34:24] CVMFS is ok
[2025-06-04 06:34:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:34:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:34:24] Further information can be found at the LHC@home message board.
[2025-06-04 06:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:34:24] Checking for apptainer binary...
[2025-06-04 06:34:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:34:24] Running /usr/bin/apptainer --version
[2025-06-04 06:34:24] apptainer version 1.3.6-6.1
[2025-06-04 06:34:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:34:24] atlasA139
[2025-06-04 06:34:24] apptainer works
[2025-06-04 06:34:24] Set ATHENA_PROC_NUMBER=4
[2025-06-04 06:34:24] Set ATHENA_CORE_NUMBER=4
[2025-06-04 06:34:24] Starting ATLAS job with PandaID=6677919095
[2025-06-04 06:34:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:37:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:37:29]  is_tar=False
[2025-06-04 07:37:29]  lfn=log.45006595._041481.job.log.tgz.1
[2025-06-04 07:37:29]  mtime=0
[2025-06-04 07:37:29]  protocol_id=None
[2025-06-04 07:37:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:37:29]  replicas=None
[2025-06-04 07:37:29]  scope=mc23_13p6TeV
[2025-06-04 07:37:29]  status=None
[2025-06-04 07:37:29]  status_code=0
[2025-06-04 07:37:29]  storage_token=
[2025-06-04 07:37:29]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677919095/log.45006595._041481.job.log.tgz.1
[2025-06-04 07:37:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/51/log.45006595._041481.job.log.tgz.1
[2025-06-04 07:37:29]  workdir=None
[2025-06-04 07:37:29] ]
[2025-06-04 07:37:29] 2025-06-04 05:37:02,702 | INFO     | transferring file log.45006595._041481.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677919095/log.45006595._041481.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 07:37:29] 2025-06-04 05:37:02,703 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677919095/log.45006595._041481.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0414
[2025-06-04 07:37:29] 2025-06-04 05:37:02,721 | INFO     | adding to output.list: log.45006595._041481.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/51/log.45006595._041481.job.log.tg
[2025-06-04 07:37:29] 2025-06-04 05:37:02,722 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:37:29] 2025-06-04 05:37:02,722 | INFO     | summary of transferred files:
[2025-06-04 07:37:29] 2025-06-04 05:37:02,722 | INFO     |  -- lfn=log.45006595._041481.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:37:29] 2025-06-04 05:37:02,722 | INFO     | stage-out finished correctly
[2025-06-04 07:37:29] 2025-06-04 05:37:05,032 | INFO     | monitor loop #290: job 0:6677919095 is in state 'finished'
[2025-06-04 07:37:29] 2025-06-04 05:37:05,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:37:29] 2025-06-04 05:37:05,057 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:37:29] 2025-06-04 05:37:07,328 | INFO     | job 6677919095 has state=finished
[2025-06-04 07:37:29] 2025-06-04 05:37:07,328 | INFO     | preparing for final server update for job 6677919095 in state='finished'
[2025-06-04 07:37:29] 2025-06-04 05:37:07,328 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:37:29] 2025-06-04 05:37:07,328 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:37:29] 2025-06-04 05:37:07,328 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:37:29] 2025-06-04 05:37:07,329 | INFO     | job 6677919095 has finished - writing final server update
[2025-06-04 07:37:29] 2025-06-04 05:37:07,329 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:37:29] 2025-06-04 05:37:07,331 | INFO     | executing command: lscpu
[2025-06-04 07:37:29] 2025-06-04 05:37:07,351 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:37:29] 2025-06-04 05:37:07,536 | INFO     | monitor loop #291: job 0:6677919095 is in state 'finished'
[2025-06-04 07:37:29] 2025-06-04 05:37:07,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,039 | INFO     | monitor loop #292: job 0:6677919095 is in state 'finished'
[2025-06-04 07:37:29] 2025-06-04 05:37:10,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,594 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:37:29] 2025-06-04 05:37:10,594 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677919095/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,594 | INFO     | extracted standard info from prmon json
[2025-06-04 07:37:29] 2025-06-04 05:37:10,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:37:29] 2025-06-04 05:37:10,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:37:29] 2025-06-04 05:37:10,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:37:29] 2025-06-04 05:37:10,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:37:29] 2025-06-04 05:37:10,595 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:37:29] 2025-06-04 05:37:10,595 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,595 | INFO     | sum of deviations: -3962449590.0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | mean x: 1749013647.0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | mean y: 2447465.2181818183
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | -- intersect: 134382265309.25449
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | intersect: 134382265309.25449
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | chi2: 0.05349064666796442
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | -- intersect: 134382265309.25449
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | current memory leak: -76.83 B/s (using 55 data points, chi2=0.05)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | ..............................
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . Timing measurements:
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . get job = 0 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . initial setup = 1 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . payload setup = 4 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . stage-in = 0 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . payload execution = 3728 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . stage-out = 0 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | . log creation = 0 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,596 | INFO     | ..............................
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | 
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | job summary report
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | --------------------------------------------------
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | PanDA job id: 6677919095
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | task id: 45006595
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | errors: (none)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | pilot state: finished 
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | transexitcode: 0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | exeerrorcode: 0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | exeerrordiag: 
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | exitcode: 0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | exitmsg: OK
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | cpuconsumptiontime: 14060 s
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | nevents: 400
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | neventsw: 0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | pid: 567758
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | pgrp: 567758
[2025-06-04 07:37:29] 2025-06-04 05:37:10,637 | INFO     | corecount: 4
[2025-06-04 07:37:29] 2025-06-04 05:37:10,638 | INFO     | event service: False
[2025-06-04 07:37:29] 2025-06-04 05:37:10,638 | INFO     | sizes: {0: 2405188, 3: 2405394, 11: 2405422, 3736: 2440134, 3739: 2440134, 3744: 2440304}
[2025-06-04 07:37:29] 2025-06-04 05:37:10,638 | INFO     | --------------------------------------------------
[2025-06-04 07:37:29] 2025-06-04 05:37:10,638 | INFO     | 
[2025-06-04 07:37:29] 2025-06-04 05:37:10,638 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | job 6677919095 has completed (purged errors)
[2025-06-04 07:37:29] 2025-06-04 05:37:10,657 | INFO     | overall cleanup function is called
[2025-06-04 07:37:29] 2025-06-04 05:37:11,663 | INFO     | --- collectZombieJob: --- 10, [567758]
[2025-06-04 07:37:29] 2025-06-04 05:37:11,664 | INFO     | zombie collector waiting for pid 567758
[2025-06-04 07:37:29] 2025-06-04 05:37:11,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:37:29] 2025-06-04 05:37:11,664 | INFO     | collected zombie processes
[2025-06-04 07:37:29] 2025-06-04 05:37:11,664 | INFO     | will attempt to kill all subprocesses of pid=567758
[2025-06-04 07:37:29] 2025-06-04 05:37:11,712 | INFO     | process IDs to be killed: [567758] (in reverse order)
[2025-06-04 07:37:29] 2025-06-04 05:37:11,744 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:37:29] 2025-06-04 05:37:11,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:37:29] 2025-06-04 05:37:11,746 | INFO     | did not find any defunct processes belonging to 567758
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | did not find any defunct processes belonging to 567758
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | ready for new job
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | **************************************
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | **************************************
[2025-06-04 07:37:29] 2025-06-04 05:37:11,748 | INFO     | 
[2025-06-04 07:37:29] 2025-06-04 05:37:11,749 | INFO     | architecture information:
[2025-06-04 07:37:29] 2025-06-04 05:37:11,749 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:37:29] 2025-06-04 05:37:11,762 | INFO     | cat /etc/os-release:
[2025-06-04 07:37:29] NAME="CentOS Linux"
[2025-06-04 07:37:29] VERSION="7 (Core)"
[2025-06-04 07:37:29] ID="centos"
[2025-06-04 07:37:29] ID_LIKE="rhel fedora"
[2025-06-04 07:37:29] VERSION_ID="7"
[2025-06-04 07:37:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:37:29] ANSI_COLOR="0;31"
[2025-06-04 07:37:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:37:29] HOME_URL="https://www.centos.org/"
[2025-06-04 07:37:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:37:29] 
[2025-06-04 07:37:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:37:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:37:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:37:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:37:29] 
[2025-06-04 07:37:29] 2025-06-04 05:37:11,762 | INFO     | **************************************
[2025-06-04 07:37:29] 2025-06-04 05:37:12,266 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:37:29] 2025-06-04 05:37:12,283 | INFO     | sufficient remaining disk space (325423464448 B)
[2025-06-04 07:37:29] 2025-06-04 05:37:12,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:37:29] 2025-06-04 05:37:12,283 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:37:29] 2025-06-04 05:37:12,283 | INFO     | update_server=False
[2025-06-04 07:37:29] 2025-06-04 05:37:12,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:37:29] 2025-06-04 05:37:12,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:37:29] 2025-06-04 05:37:12,307 | INFO     | all job control threads have been joined
[2025-06-04 07:37:29] 2025-06-04 05:37:12,542 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:37:29] 2025-06-04 05:37:12,543 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:37:29] 2025-06-04 05:37:12,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:37:29] 2025-06-04 05:37:12,543 | INFO     | will abort loop
[2025-06-04 07:37:29] 2025-06-04 05:37:12,661 | INFO     | all data control threads have been joined
[2025-06-04 07:37:29] 2025-06-04 05:37:12,872 | INFO     | PID=561123 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 07:37:29] 2025-06-04 05:37:12,872 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:37:29] 2025-06-04 05:37:12,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:37:29] 2025-06-04 05:37:12,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:37:29] 2025-06-04 05:37:13,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:37:29] 2025-06-04 05:37:13,289 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,289 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,312 | INFO     | [job] control thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,365 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,471 | INFO     | all payload control threads have been joined
[2025-06-04 07:37:29] 2025-06-04 05:37:13,549 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,619 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,666 | INFO     | [data] control thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:13,849 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:14,291 | INFO     | [job] validate thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:14,428 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:14,433 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:14,477 | INFO     | [payload] control thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:14,592 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:15,285 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:15,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:37:29] 2025-06-04 05:37:19,622 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:22,687 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:37:29] 2025-06-04 05:37:23,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:37:29] 2025-06-04 05:37:23,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372939593536)>', '<ExcThread(monitor, started 140371971516160)>']
[2025-06-04 07:37:29] 2025-06-04 05:37:23,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:37:29] 2025-06-04 05:37:23,931 | INFO     | [monitor] control thread has ended
[2025-06-04 07:37:29] 2025-06-04 05:37:28,833 | INFO     | all workflow threads have been joined
[2025-06-04 07:37:29] 2025-06-04 05:37:28,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:37:29] 2025-06-04 05:37:28,834 | INFO     | traces error code: 0
[2025-06-04 07:37:29] 2025-06-04 05:37:28,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:37:29] 2025-06-04 05:37:28,905 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:37:29] 2025-06-04 05:37:28,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:37:29] 2025-06-04 05:37:28,913 [wrapper] pilotpid: 561123
[2025-06-04 07:37:29] 2025-06-04 05:37:28,917 [wrapper] Pilot exit status: 0
[2025-06-04 07:37:29] 2025-06-04 05:37:28,928 [wrapper] pandaids: 6677919095
[2025-06-04 07:37:29] 2025-06-04 05:37:28,950 [wrapper] cleanup supervisor_pilot  577468 561124
[2025-06-04 07:37:29] 2025-06-04 05:37:28,954 [wrapper] Test setup, not cleaning
[2025-06-04 07:37:29] 2025-06-04 05:37:28,958 [wrapper] apfmon messages muted
[2025-06-04 07:37:29] 2025-06-04 05:37:28,962 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:37:29] 2025-06-04 05:37:28,966 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:37:29]  *** Error codes and diagnostics ***
[2025-06-04 07:37:29]     "exeErrorCode": 0,
[2025-06-04 07:37:29]     "exeErrorDiag": "",
[2025-06-04 07:37:29]     "pilotErrorCode": 0,
[2025-06-04 07:37:29]     "pilotErrorDiag": "",
[2025-06-04 07:37:29]  *** Listing of results directory ***
[2025-06-04 07:37:29] total 390364
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 07:37:29] -rwx------ 1 boinc boinc     37140 Jun  3 20:00 runpilot2-wrapper.sh
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:00 queuedata.json
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:37:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:34 run_atlas
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:34 job.xml
[2025-06-04 07:37:29] -rw-r--r-- 2 boinc boinc 214464505 Jun  4 06:34 EVNT.45006593._001661.pool.root.1
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc      6856 Jun  4 06:34 init_data.xml
[2025-06-04 07:37:29] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:34 shared
[2025-06-04 07:37:29] -rw-r--r-- 2 boinc boinc    508877 Jun  4 06:34 input.tar.gz
[2025-06-04 07:37:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:34 start_atlas.sh
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:34 boinc_lockfile
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc      2526 Jun  4 06:34 pandaJob.out
[2025-06-04 07:37:29] -rw------- 1 boinc boinc    986077 Jun  4 06:34 agis_schedconf.cvmfs.json
[2025-06-04 07:37:29] -rw------- 1 boinc boinc   1603667 Jun  4 06:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:37:29] drwx------ 4 boinc boinc      4096 Jun  4 06:34 pilot3
[2025-06-04 07:37:29] -rw------- 1 boinc boinc 180218832 Jun  4 07:36 HITS.45006595._041481.pool.root.1
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc       529 Jun  4 07:36 boinc_task_state.xml
[2025-06-04 07:37:29] -rw------- 1 boinc boinc        95 Jun  4 07:36 pilot_heartbeat.json
[2025-06-04 07:37:29] -rw------- 1 boinc boinc      1021 Jun  4 07:36 memory_monitor_summary.json
[2025-06-04 07:37:29] -rw------- 1 boinc boinc    228928 Jun  4 07:37 log.45006595._041481.job.log.tgz.1
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:37 boinc_mmap_file
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc        27 Jun  4 07:37 wrapper_checkpoint.txt
[2025-06-04 07:37:29] -rw------- 1 boinc boinc      7662 Jun  4 07:37 heartbeat.json
[2025-06-04 07:37:29] -rw------- 1 boinc boinc      4933 Jun  4 07:37 pilotlog.txt
[2025-06-04 07:37:29] -rw------- 1 boinc boinc    377922 Jun  4 07:37 log.45006595._041481.job.log.1
[2025-06-04 07:37:29] -rw------- 1 boinc boinc       357 Jun  4 07:37 output.list
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:37 runtime_log
[2025-06-04 07:37:29] -rw------- 1 boinc boinc    624640 Jun  4 07:37 result.tar.gz
[2025-06-04 07:37:29] -rw------- 1 boinc boinc       661 Jun  4 07:37 zUyKDmH7kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWWZKDmJ9xyYn.diag
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc      8748 Jun  4 07:37 runtime_log.err
[2025-06-04 07:37:29] -rw-r--r-- 1 boinc boinc     21508 Jun  4 07:37 stderr.txt
[2025-06-04 07:37:29] HITS file was successfully produced:
[2025-06-04 07:37:29] -rw------- 1 boinc boinc 180218832 Jun  4 07:36 shared/HITS.pool.root.1
[2025-06-04 07:37:29]  *** Contents of shared directory: ***
[2025-06-04 07:37:29] total 386572
[2025-06-04 07:37:29] -rw-r--r-- 2 boinc boinc 214464505 Jun  4 06:34 ATLAS.root_0
[2025-06-04 07:37:29] -rw-r--r-- 2 boinc boinc    508877 Jun  4 06:34 input.tar.gz
[2025-06-04 07:37:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:34 start_atlas.sh
[2025-06-04 07:37:29] -rw------- 1 boinc boinc 180218832 Jun  4 07:36 HITS.pool.root.1
[2025-06-04 07:37:29] -rw------- 1 boinc boinc    624640 Jun  4 07:37 result.tar.gz
07:37:50 (557418): run_atlas exited; CPU time 14069.859436
07:37:50 (557418): called boinc_finish(0)

</stderr_txt>
]]>

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