Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:07:28 (1154631): wrapper (7.7.26015): starting
17:07:28 (1154631): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:07:28] Arguments: --nthreads 8
[2025-06-03 17:07:28] Threads: 8
[2025-06-03 17:07:28] Checking for CVMFS
[2025-06-03 17:07:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:07:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:07:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:07:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:07:29] 2.12.6.0 4820 417 73424 146755 3 187 18522391 32935937 3611 16776704 0 1876212 99.998 83371 43581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 17:07:29] CVMFS is ok
[2025-06-03 17:07:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:07:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:07:29] Further information can be found at the LHC@home message board.
[2025-06-03 17:07:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:07:29] Checking for apptainer binary...
[2025-06-03 17:07:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:07:29] Running /usr/bin/apptainer --version
[2025-06-03 17:07:29] apptainer version 1.4.1-1.el9
[2025-06-03 17:07:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:07:29] c-8-32.aglt2.org
[2025-06-03 17:07:29] apptainer works
[2025-06-03 17:07:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:07:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:07:29] Starting ATLAS job with PandaID=6677884510
[2025-06-03 17:07:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:45:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:45:01]  is_altstaged=None
[2025-06-03 18:45:01]  is_tar=False
[2025-06-03 18:45:01]  lfn=log.45006595._041127.job.log.tgz.1
[2025-06-03 18:45:01]  mtime=0
[2025-06-03 18:45:01]  protocol_id=None
[2025-06-03 18:45:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:45:01]  replicas=None
[2025-06-03 18:45:01]  scope=mc23_13p6TeV
[2025-06-03 18:45:01]  status=None
[2025-06-03 18:45:01]  status_code=0
[2025-06-03 18:45:01]  storage_token=
[2025-06-03 18:45:01]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677884510/log.45006595._041127.job.log.tgz.1
[2025-06-03 18:45:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/99/log.45006595._041127.job.log.tgz.1
[2025-06-03 18:45:01]  workdir=None
[2025-06-03 18:45:01] ]
[2025-06-03 18:45:01] 2025-06-03 22:44:39,441 | INFO     | transferring file log.45006595._041127.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677884510/log.45006595._041127.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:45:01] 2025-06-03 22:44:39,441 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677884510/log.45006595._041127.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._041127.job
[2025-06-03 18:45:01] 2025-06-03 22:44:39,457 | INFO     | adding to output.list: log.45006595._041127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/99/log.45006595._041127.job.log.tg
[2025-06-03 18:45:01] 2025-06-03 22:44:39,458 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:45:01] 2025-06-03 22:44:39,458 | INFO     | summary of transferred files:
[2025-06-03 18:45:01] 2025-06-03 22:44:39,459 | INFO     |  -- lfn=log.45006595._041127.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:45:01] 2025-06-03 22:44:39,459 | INFO     | stage-out finished correctly
[2025-06-03 18:45:01] 2025-06-03 22:44:39,770 | INFO     | monitor loop #427: job 0:6677884510 is in state 'finished'
[2025-06-03 18:45:01] 2025-06-03 22:44:39,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:45:01] 2025-06-03 22:44:40,674 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:45:01] 2025-06-03 22:44:42,277 | INFO     | monitor loop #428: job 0:6677884510 is in state 'finished'
[2025-06-03 18:45:01] 2025-06-03 22:44:42,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:45:01] 2025-06-03 22:44:43,274 | INFO     | job 6677884510 has state=finished
[2025-06-03 18:45:01] 2025-06-03 22:44:43,275 | INFO     | preparing for final server update for job 6677884510 in state='finished'
[2025-06-03 18:45:01] 2025-06-03 22:44:43,275 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:45:01] 2025-06-03 22:44:43,275 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:45:01] 2025-06-03 22:44:43,275 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:45:01] 2025-06-03 22:44:43,276 | INFO     | job 6677884510 has finished - writing final server update
[2025-06-03 18:45:01] 2025-06-03 22:44:43,276 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:45:01] 2025-06-03 22:44:43,291 | INFO     | executing command: lscpu
[2025-06-03 18:45:01] 2025-06-03 22:44:43,343 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:45:01] 2025-06-03 22:44:44,780 | INFO     | monitor loop #429: job 0:6677884510 is in state 'finished'
[2025-06-03 18:45:01] 2025-06-03 22:44:44,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:45:01] 2025-06-03 22:44:46,241 | INFO     | PID=1158239 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 18:45:01] 2025-06-03 22:44:46,241 | INFO     | .. there are 5 such processes running
[2025-06-03 18:45:01] 2025-06-03 22:44:46,806 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:45:01] 2025-06-03 22:44:46,807 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677884510/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:45:01] 2025-06-03 22:44:46,807 | INFO     | extracted standard info from prmon json
[2025-06-03 18:45:01] 2025-06-03 22:44:46,808 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:45:01] 2025-06-03 22:44:46,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:45:01] 2025-06-03 22:44:46,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:45:01] 2025-06-03 22:44:46,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:45:01] 2025-06-03 22:44:46,811 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:45:01] 2025-06-03 22:44:46,812 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 18:45:01] 2025-06-03 22:44:46,812 | INFO     | sum of deviations: 16541483948.0
[2025-06-03 18:45:01] 2025-06-03 22:44:46,812 | INFO     | mean x: 1748987843.5
[2025-06-03 18:45:01] 2025-06-03 22:44:46,812 | INFO     | mean y: 2092531.7045454546
[2025-06-03 18:45:01] 2025-06-03 22:44:46,813 | INFO     | -- intersect: -136925478209.42348
[2025-06-03 18:45:01] 2025-06-03 22:44:46,813 | INFO     | intersect: -136925478209.42348
[2025-06-03 18:45:01] 2025-06-03 22:44:46,813 | INFO     | chi2: 1.1845793325973717
[2025-06-03 18:45:01] 2025-06-03 22:44:46,813 | INFO     | -- intersect: -136925478209.42348
[2025-06-03 18:45:01] 2025-06-03 22:44:46,813 | INFO     | current memory leak: 78.29 B/s (using 88 data points, chi2=1.18)
[2025-06-03 18:45:01] 2025-06-03 22:44:46,814 | INFO     | ..............................
[2025-06-03 18:45:01] 2025-06-03 22:44:46,814 | INFO     | . Timing measurements:
[2025-06-03 18:45:01] 2025-06-03 22:44:46,814 | INFO     | . get job = 0 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,814 | INFO     | . initial setup = 3 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,814 | INFO     | . payload setup = 5 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,814 | INFO     | . stage-in = 0 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,815 | INFO     | . payload execution = 5794 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,815 | INFO     | . stage-out = 0 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,815 | INFO     | . log creation = 0 s
[2025-06-03 18:45:01] 2025-06-03 22:44:46,815 | INFO     | ..............................
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | 
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | job summary report
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | --------------------------------------------------
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | PanDA job id: 6677884510
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | task id: 45006595
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | errors: (none)
[2025-06-03 18:45:01] 2025-06-03 22:44:47,165 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | pilot state: finished 
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | transexitcode: 0
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | exeerrorcode: 0
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | exeerrordiag: 
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | exitcode: 0
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | exitmsg: OK
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | cpuconsumptiontime: 39814 s
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | nevents: 400
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | neventsw: 0
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | pid: 1164804
[2025-06-03 18:45:01] 2025-06-03 22:44:47,166 | INFO     | pgrp: 1164804
[2025-06-03 18:45:01] 2025-06-03 22:44:47,167 | INFO     | corecount: 8
[2025-06-03 18:45:01] 2025-06-03 22:44:47,167 | INFO     | event service: False
[2025-06-03 18:45:01] 2025-06-03 22:44:47,167 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 5803: 2432019, 5804: 2440960, 5806: 2441144, 5812: 2441314}
[2025-06-03 18:45:01] 2025-06-03 22:44:47,167 | INFO     | --------------------------------------------------
[2025-06-03 18:45:01] 2025-06-03 22:44:47,167 | INFO     | 
[2025-06-03 18:45:01] 2025-06-03 22:44:47,167 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 18:45:01] 2025-06-03 22:44:47,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:45:01] 2025-06-03 22:44:47,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:45:01] 2025-06-03 22:44:47,187 | INFO     | job 6677884510 has completed (purged errors)
[2025-06-03 18:45:01] 2025-06-03 22:44:47,187 | INFO     | overall cleanup function is called
[2025-06-03 18:45:01] 2025-06-03 22:44:48,195 | INFO     | --- collectZombieJob: --- 10, [1164804]
[2025-06-03 18:45:01] 2025-06-03 22:44:48,196 | INFO     | zombie collector waiting for pid 1164804
[2025-06-03 18:45:01] 2025-06-03 22:44:48,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:45:01] 2025-06-03 22:44:48,196 | INFO     | collected zombie processes
[2025-06-03 18:45:01] 2025-06-03 22:44:48,196 | INFO     | will attempt to kill all subprocesses of pid=1164804
[2025-06-03 18:45:01] 2025-06-03 22:44:48,442 | INFO     | process IDs to be killed: [1164804] (in reverse order)
[2025-06-03 18:45:01] 2025-06-03 22:44:48,510 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:45:01] 2025-06-03 22:44:48,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:45:01] 2025-06-03 22:44:48,517 | INFO     | did not find any defunct processes belonging to 1164804
[2025-06-03 18:45:01] 2025-06-03 22:44:48,524 | INFO     | did not find any defunct processes belonging to 1164804
[2025-06-03 18:45:01] 2025-06-03 22:44:48,524 | INFO     | ready for new job
[2025-06-03 18:45:01] 2025-06-03 22:44:48,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:45:01] 2025-06-03 22:44:48,526 | INFO     | **************************************
[2025-06-03 18:45:01] 2025-06-03 22:44:48,526 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:45:01] 2025-06-03 22:44:48,526 | INFO     | **************************************
[2025-06-03 18:45:01] 2025-06-03 22:44:48,526 | INFO     | 
[2025-06-03 18:45:01] 2025-06-03 22:44:48,540 | INFO     | architecture information:
[2025-06-03 18:45:01] 2025-06-03 22:44:48,541 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:45:01] 2025-06-03 22:44:48,552 | INFO     | cat /etc/os-release:
[2025-06-03 18:45:01] NAME="CentOS Linux"
[2025-06-03 18:45:01] VERSION="7 (Core)"
[2025-06-03 18:45:01] ID="centos"
[2025-06-03 18:45:01] ID_LIKE="rhel fedora"
[2025-06-03 18:45:01] VERSION_ID="7"
[2025-06-03 18:45:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:45:01] ANSI_COLOR="0;31"
[2025-06-03 18:45:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:45:01] HOME_URL="https://www.centos.org/"
[2025-06-03 18:45:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:45:01] 
[2025-06-03 18:45:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:45:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:45:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:45:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:45:01] 
[2025-06-03 18:45:01] 2025-06-03 22:44:48,553 | INFO     | **************************************
[2025-06-03 18:45:01] 2025-06-03 22:44:49,056 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 18:45:01] 2025-06-03 22:44:49,070 | INFO     | sufficient remaining disk space (74567385088 B)
[2025-06-03 18:45:01] 2025-06-03 22:44:49,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:45:01] 2025-06-03 22:44:49,070 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:45:01] 2025-06-03 22:44:49,070 | INFO     | update_server=False
[2025-06-03 18:45:01] 2025-06-03 22:44:49,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:45:01] 2025-06-03 22:44:49,071 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:45:01] 2025-06-03 22:44:49,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:45:01] 2025-06-03 22:44:49,071 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:45:01] 2025-06-03 22:44:49,071 | INFO     | aborting loop
[2025-06-03 18:45:01] 2025-06-03 22:44:49,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:45:01] 2025-06-03 22:44:49,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:45:01] 2025-06-03 22:44:49,122 | INFO     | all data control threads have been joined
[2025-06-03 18:45:01] 2025-06-03 22:44:49,123 | INFO     | all payload control threads have been joined
[2025-06-03 18:45:01] 2025-06-03 22:44:49,942 | INFO     | all job control threads have been joined
[2025-06-03 18:45:01] 2025-06-03 22:44:50,072 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,077 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:45:01] 2025-06-03 22:44:50,126 | INFO     | [payload] control thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,127 | INFO     | [data] control thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,795 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,834 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:50,947 | INFO     | [job] control thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:51,226 | INFO     | [job] validate thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:51,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:45:01] 2025-06-03 22:44:51,351 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:51,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:51,526 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:51,531 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:51,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:45:01] 2025-06-03 22:44:52,085 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:52,945 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:55,288 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:45:01] 2025-06-03 22:44:55,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492143638336)>', '<ExcThread(monitor, started 140491643406080)>']
[2025-06-03 18:45:01] 2025-06-03 22:44:56,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:45:01] 2025-06-03 22:44:56,105 | INFO     | [monitor] control thread has ended
[2025-06-03 18:45:01] 2025-06-03 22:45:00,876 | INFO     | all workflow threads have been joined
[2025-06-03 18:45:01] 2025-06-03 22:45:00,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:45:01] 2025-06-03 22:45:00,877 | INFO     | traces error code: 0
[2025-06-03 18:45:01] 2025-06-03 22:45:00,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:45:01] 2025-06-03 22:45:00,982 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:45:01] 2025-06-03 22:45:00,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:45:01] 2025-06-03 22:45:00,987 [wrapper] pilotpid: 1158239
[2025-06-03 18:45:01] 2025-06-03 22:45:00,989 [wrapper] Pilot exit status: 0
[2025-06-03 18:45:01] 2025-06-03 22:45:00,997 [wrapper] pandaids: 6677884510
[2025-06-03 18:45:01] 2025-06-03 22:45:01,041 [wrapper] cleanup supervisor_pilot 1358737 1158240
[2025-06-03 18:45:01] 2025-06-03 22:45:01,044 [wrapper] Test setup, not cleaning
[2025-06-03 18:45:01] 2025-06-03 22:45:01,046 [wrapper] apfmon messages muted
[2025-06-03 18:45:01] 2025-06-03 22:45:01,049 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:45:01] 2025-06-03 22:45:01,051 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:45:01]  *** Error codes and diagnostics ***
[2025-06-03 18:45:01]     "exeErrorCode": 0,
[2025-06-03 18:45:01]     "exeErrorDiag": "",
[2025-06-03 18:45:01]     "pilotErrorCode": 0,
[2025-06-03 18:45:01]     "pilotErrorDiag": "",
[2025-06-03 18:45:01]  *** Listing of results directory ***
[2025-06-03 18:45:01] total 395480
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 18:45:01] -rwx------. 1 boincer umatlas     37140 Jun  3 13:55 runpilot2-wrapper.sh
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 13:55 queuedata.json
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas       100 Jun  3 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:45:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 17:07 run_atlas
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas       105 Jun  3 17:07 job.xml
[2025-06-03 18:45:01] -rw-r--r--. 2 boincer umatlas 213518061 Jun  3 17:07 EVNT.45006593._001647.pool.root.1
[2025-06-03 18:45:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 17:07 start_atlas.sh
[2025-06-03 18:45:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 17:07 shared
[2025-06-03 18:45:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 17:07 input.tar.gz
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas         0 Jun  3 17:07 boinc_lockfile
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 17:07 pandaJob.out
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas    986853 Jun  3 17:07 agis_schedconf.cvmfs.json
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:45:01] drwx------. 4 boincer umatlas      4096 Jun  3 17:07 pilot3
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas      6708 Jun  3 18:37 init_data.xml
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas 185837758 Jun  3 18:44 HITS.45006595._041127.pool.root.1
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas       530 Jun  3 18:44 boinc_task_state.xml
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas      1033 Jun  3 18:44 memory_monitor_summary.json
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas        95 Jun  3 18:44 pilot_heartbeat.json
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas    328446 Jun  3 18:44 log.45006595._041127.job.log.tgz.1
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas      7703 Jun  3 18:44 heartbeat.json
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:44 wrapper_checkpoint.txt
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:45 boinc_mmap_file
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas      4476 Jun  3 18:45 pilotlog.txt
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas    559146 Jun  3 18:45 log.45006595._041127.job.log.1
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas       357 Jun  3 18:45 output.list
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:45 runtime_log
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas    911360 Jun  3 18:45 result.tar.gz
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas       649 Jun  3 18:45 WOEMDmD2kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbTZKDmgbv1Hm.diag
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 18:45 runtime_log.err
[2025-06-03 18:45:01] -rw-r--r--. 1 boincer umatlas     21514 Jun  3 18:45 stderr.txt
[2025-06-03 18:45:01] HITS file was successfully produced:
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas 185837758 Jun  3 18:44 shared/HITS.pool.root.1
[2025-06-03 18:45:01]  *** Contents of shared directory: ***
[2025-06-03 18:45:01] total 391412
[2025-06-03 18:45:01] -rw-r--r--. 2 boincer umatlas 213518061 Jun  3 17:07 ATLAS.root_0
[2025-06-03 18:45:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 17:07 start_atlas.sh
[2025-06-03 18:45:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 17:07 input.tar.gz
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas 185837758 Jun  3 18:44 HITS.pool.root.1
[2025-06-03 18:45:01] -rw-------. 1 boincer umatlas    911360 Jun  3 18:45 result.tar.gz
18:45:02 (1154631): run_atlas exited; CPU time 39920.954713
18:45:02 (1154631): called boinc_finish(0)

</stderr_txt>
]]>

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