Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:47:29 (22710): wrapper (7.7.26015): starting
11:47:29 (22710): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:47:29] Arguments: --nthreads 8
[2025-06-04 11:47:29] Threads: 8
[2025-06-04 11:47:29] Checking for CVMFS
[2025-06-04 11:47:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:47:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:47:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:47:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:47:32] 2.11.2.0 29611 33035 95608 146775 0 16 17214734 25165824 4294 130560 0 16731013 99.822 19334106 2202 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:47:32] CVMFS is ok
[2025-06-04 11:47:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:47:32] Checking for apptainer binary...
[2025-06-04 11:47:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:47:32] Running /usr/bin/apptainer --version
[2025-06-04 11:47:32] apptainer version 1.3.2-1.el7
[2025-06-04 11:47:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:47:55] cg-vwn406.simple-grid.lan
[2025-06-04 11:47:55] apptainer works
[2025-06-04 11:47:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:47:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:47:55] Starting ATLAS job with PandaID=6677864322
[2025-06-04 11:47:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:03:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:03:04] 2025-06-04 13:46:57,770 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677864322/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:03:04] 2025-06-04 13:46:57,771 | INFO     | extracted standard info from prmon json
[2025-06-04 18:03:04] 2025-06-04 13:46:57,771 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:03:04] 2025-06-04 13:46:57,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:03:04] 2025-06-04 13:46:57,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:03:04] 2025-06-04 13:46:57,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:03:04] 2025-06-04 13:46:57,777 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:03:04] 2025-06-04 13:46:57,778 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,780 | INFO     | sum of deviations: 80607464423.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,780 | INFO     | mean x: 1749037919.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,780 | INFO     | mean y: 2420063.0179372197
[2025-06-04 18:03:04] 2025-06-04 13:46:57,780 | INFO     | -- intersect: -40998179304.69927
[2025-06-04 18:03:04] 2025-06-04 13:46:57,781 | INFO     | intersect: -40998179304.69927
[2025-06-04 18:03:04] 2025-06-04 13:46:57,781 | INFO     | chi2: 7.208731463925219
[2025-06-04 18:03:04] 2025-06-04 13:46:57,782 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 18:03:04] 2025-06-04 13:46:57,783 | INFO     | sum of deviations: 93286644860.00002
[2025-06-04 18:03:04] 2025-06-04 13:46:57,784 | INFO     | mean x: 1749037766.5
[2025-06-04 18:03:04] 2025-06-04 13:46:57,784 | INFO     | mean y: 2428432.5321100918
[2025-06-04 18:03:04] 2025-06-04 13:46:57,784 | INFO     | -- intersect: -50787768233.21589
[2025-06-04 18:03:04] 2025-06-04 13:46:57,784 | INFO     | intersect: -50787768233.21589
[2025-06-04 18:03:04] 2025-06-04 13:46:57,784 | INFO     | chi2: 6.505235663956718
[2025-06-04 18:03:04] 2025-06-04 13:46:57,785 | INFO     | current chi2=6.505235663956718 (change=9.758940300231986 %)
[2025-06-04 18:03:04] 2025-06-04 13:46:57,785 | INFO     | right removable region: 217
[2025-06-04 18:03:04] 2025-06-04 13:46:57,785 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 18:03:04] 2025-06-04 13:46:57,787 | INFO     | sum of deviations: 4024651594.999998
[2025-06-04 18:03:04] 2025-06-04 13:46:57,787 | INFO     | mean x: 1749038071.5
[2025-06-04 18:03:04] 2025-06-04 13:46:57,787 | INFO     | mean y: 2471659.76146789
[2025-06-04 18:03:04] 2025-06-04 13:46:57,787 | INFO     | -- intersect: -2188762487.1389556
[2025-06-04 18:03:04] 2025-06-04 13:46:57,787 | INFO     | intersect: -2188762487.1389556
[2025-06-04 18:03:04] 2025-06-04 13:46:57,788 | INFO     | chi2: 2.327224685225352
[2025-06-04 18:03:04] 2025-06-04 13:46:57,788 | INFO     | current chi2=2.327224685225352 (change=67.71658513191228 %)
[2025-06-04 18:03:04] 2025-06-04 13:46:57,788 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,790 | INFO     | sum of deviations: -33637670054.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,790 | INFO     | mean x: 1749038224.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,790 | INFO     | mean y: 2498078.079812207
[2025-06-04 18:03:04] 2025-06-04 13:46:57,790 | INFO     | -- intersect: 19636894056.950382
[2025-06-04 18:03:04] 2025-06-04 13:46:57,790 | INFO     | intersect: 19636894056.950382
[2025-06-04 18:03:04] 2025-06-04 13:46:57,791 | INFO     | chi2: 0.9322714877765572
[2025-06-04 18:03:04] 2025-06-04 13:46:57,791 | INFO     | current chi2=0.9322714877765572 (change=59.940632561385776 %)
[2025-06-04 18:03:04] 2025-06-04 13:46:57,791 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,793 | INFO     | sum of deviations: -31819305926.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,793 | INFO     | mean x: 1749038376.5
[2025-06-04 18:03:04] 2025-06-04 13:46:57,793 | INFO     | mean y: 2496679.923076923
[2025-06-04 18:03:04] 2025-06-04 13:46:57,794 | INFO     | -- intersect: 19947386903.451595
[2025-06-04 18:03:04] 2025-06-04 13:46:57,794 | INFO     | intersect: 19947386903.451595
[2025-06-04 18:03:04] 2025-06-04 13:46:57,794 | INFO     | chi2: 0.9077364282013182
[2025-06-04 18:03:04] 2025-06-04 13:46:57,794 | INFO     | current chi2=0.9077364282013182 (change=2.6317505036815527 %)
[2025-06-04 18:03:04] 2025-06-04 13:46:57,794 | INFO     | left removable region: 30
[2025-06-04 18:03:04] 2025-06-04 13:46:57,795 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,796 | INFO     | sum of deviations: 2799637212.0000005
[2025-06-04 18:03:04] 2025-06-04 13:46:57,797 | INFO     | mean x: 1749038651.0
[2025-06-04 18:03:04] 2025-06-04 13:46:57,797 | INFO     | mean y: 2490081.9572192514
[2025-06-04 18:03:04] 2025-06-04 13:46:57,797 | INFO     | -- intersect: -2412472133.8164253
[2025-06-04 18:03:04] 2025-06-04 13:46:57,797 | INFO     | intersect: -2412472133.8164253
[2025-06-04 18:03:04] 2025-06-04 13:46:57,797 | INFO     | chi2: 0.0008886925814255238
[2025-06-04 18:03:04] 2025-06-04 13:46:57,797 | INFO     | -- intersect: -2412472133.8164253
[2025-06-04 18:03:04] 2025-06-04 13:46:57,798 | INFO     | current memory leak: 1.38 B/s (using 187 data points, chi2=0.00)
[2025-06-04 18:03:04] 2025-06-04 13:46:57,798 | INFO     | ..............................
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . Timing measurements:
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . get job = 0 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . initial setup = 7 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . payload setup = 152 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . stage-in = 0 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . payload execution = 13735 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,799 | INFO     | . stage-out = 3 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,800 | INFO     | . log creation = 1 s
[2025-06-04 18:03:04] 2025-06-04 13:46:57,800 | INFO     | ..............................
[2025-06-04 18:03:04] 2025-06-04 13:46:58,099 | INFO     | 
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | job summary report
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | --------------------------------------------------
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | PanDA job id: 6677864322
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | task id: 45006595
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | errors: (none)
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:03:04] 2025-06-04 13:46:58,100 | INFO     | pilot state: finished 
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | transexitcode: 0
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | exeerrorcode: 0
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | exeerrordiag: 
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | exitcode: 0
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | exitmsg: OK
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | cpuconsumptiontime: 51305 s
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | nevents: 400
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | neventsw: 0
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | pid: 10164
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | pgrp: 10164
[2025-06-04 18:03:04] 2025-06-04 13:46:58,101 | INFO     | corecount: 8
[2025-06-04 18:03:04] 2025-06-04 13:46:58,102 | INFO     | event service: False
[2025-06-04 18:03:04] 2025-06-04 13:46:58,102 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 66: 2405508, 76: 2405536, 87: 2405592, 90: 2405826, 98: 2406134, 1
[2025-06-04 18:03:04] 2025-06-04 13:46:58,102 | INFO     | --------------------------------------------------
[2025-06-04 18:03:04] 2025-06-04 13:46:58,102 | INFO     | 
[2025-06-04 18:03:04] 2025-06-04 13:46:58,102 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 18:03:04] 2025-06-04 13:46:58,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,541 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:03:04] 2025-06-04 13:46:58,542 | INFO     | job 6677864322 has completed (purged errors)
[2025-06-04 18:03:04] 2025-06-04 13:46:58,542 | INFO     | overall cleanup function is called
[2025-06-04 18:03:04] 2025-06-04 13:46:59,550 | INFO     | --- collectZombieJob: --- 10, [10164]
[2025-06-04 18:03:04] 2025-06-04 13:46:59,551 | INFO     | zombie collector waiting for pid 10164
[2025-06-04 18:03:04] 2025-06-04 13:46:59,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:03:04] 2025-06-04 13:46:59,551 | INFO     | collected zombie processes
[2025-06-04 18:03:04] 2025-06-04 13:46:59,551 | INFO     | will attempt to kill all subprocesses of pid=10164
[2025-06-04 18:03:04] 2025-06-04 13:46:59,665 | INFO     | process IDs to be killed: [10164] (in reverse order)
[2025-06-04 18:03:04] 2025-06-04 13:47:00,448 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:03:04] 2025-06-04 13:47:00,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:03:04] 2025-06-04 13:47:00,467 | INFO     | did not find any defunct processes belonging to 10164
[2025-06-04 18:03:04] 2025-06-04 13:47:00,470 | INFO     | did not find any defunct processes belonging to 10164
[2025-06-04 18:03:04] 2025-06-04 13:47:00,471 | INFO     | ready for new job
[2025-06-04 18:03:04] 2025-06-04 13:47:00,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:03:04] 2025-06-04 13:47:00,473 | INFO     | **************************************
[2025-06-04 18:03:04] 2025-06-04 13:47:00,474 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:03:04] 2025-06-04 13:47:00,474 | INFO     | **************************************
[2025-06-04 18:03:04] 2025-06-04 13:47:00,474 | INFO     | 
[2025-06-04 18:03:04] 2025-06-04 13:47:00,474 | INFO     | pilot is running in a VM
[2025-06-04 18:03:04] 2025-06-04 13:47:00,475 | INFO     | architecture information:
[2025-06-04 18:03:04] 2025-06-04 13:47:00,489 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:03:04] 2025-06-04 13:47:00,704 | INFO     | cat /etc/os-release:
[2025-06-04 18:03:04] NAME="CentOS Linux"
[2025-06-04 18:03:04] VERSION="7 (Core)"
[2025-06-04 18:03:04] ID="centos"
[2025-06-04 18:03:04] ID_LIKE="rhel fedora"
[2025-06-04 18:03:04] VERSION_ID="7"
[2025-06-04 18:03:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:03:04] ANSI_COLOR="0;31"
[2025-06-04 18:03:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:03:04] HOME_URL="https://www.centos.org/"
[2025-06-04 18:03:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:03:04] 
[2025-06-04 18:03:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:03:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:03:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:03:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:03:04] 
[2025-06-04 18:03:04] 2025-06-04 13:47:00,705 | INFO     | **************************************
[2025-06-04 18:03:04] 2025-06-04 13:47:01,208 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 18:03:04] 2025-06-04 13:47:01,336 | INFO     | sufficient remaining disk space (496205037568 B)
[2025-06-04 18:03:04] 2025-06-04 13:47:01,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:03:04] 2025-06-04 13:47:01,337 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:03:04] 2025-06-04 13:47:01,337 | INFO     | update_server=False
[2025-06-04 18:03:04] 2025-06-04 13:47:01,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:03:04] 2025-06-04 13:47:01,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:03:04] 2025-06-04 13:47:01,339 | INFO     | aborting loop
[2025-06-04 18:03:04] 2025-06-04 13:47:01,456 | INFO     | all data control threads have been joined
[2025-06-04 18:03:04] 2025-06-04 13:47:01,655 | INFO     | all payload control threads have been joined
[2025-06-04 18:03:04] 2025-06-04 13:47:01,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:03:04] 2025-06-04 13:47:01,948 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:03:04] 2025-06-04 13:47:01,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:03:04] 2025-06-04 13:47:01,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:03:04] 2025-06-04 13:47:02,180 | INFO     | all job control threads have been joined
[2025-06-04 18:03:04] 2025-06-04 13:47:02,344 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,345 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,396 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,463 | INFO     | [data] control thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,506 | INFO     | [job] validate thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,662 | INFO     | [payload] control thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,825 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,845 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,922 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:02,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:03:04] 2025-06-04 13:47:03,052 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:03,187 | INFO     | [job] control thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:03,512 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:03,644 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:03,783 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:03,947 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:04,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:03:04] 2025-06-04 13:47:08,511 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:03:04] 2025-06-04 13:47:10,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198216484672)>', '<ExcThread(monitor, started 140197773690624)>']
[2025-06-04 18:03:04] 2025-06-04 13:47:11,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:03:04] 2025-06-04 13:47:11,003 | INFO     | [monitor] control thread has ended
[2025-06-04 18:03:04] 2025-06-04 13:47:15,135 | INFO     | all workflow threads have been joined
[2025-06-04 18:03:04] 2025-06-04 13:47:15,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:03:04] 2025-06-04 13:47:15,136 | INFO     | traces error code: 0
[2025-06-04 18:03:04] 2025-06-04 13:47:15,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:03:04] 2025-06-04 13:47:15,428 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:03:04] 2025-06-04 13:47:15,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:03:04] 2025-06-04 13:47:15,526 [wrapper] pilotpid: 31981
[2025-06-04 18:03:04] 2025-06-04 13:47:15,586 [wrapper] Pilot exit status: 0
[2025-06-04 18:03:04] 2025-06-04 13:47:15,954 [wrapper] pandaids: 6677864322
[2025-06-04 18:03:04] 2025-06-04 13:47:16,965 [wrapper] cleanup supervisor_pilot 18861 31982
[2025-06-04 18:03:04] 2025-06-04 13:47:17,041 [wrapper] Test setup, not cleaning
[2025-06-04 18:03:04] 2025-06-04 13:47:17,109 [wrapper] apfmon messages muted
[2025-06-04 18:03:04] 2025-06-04 13:47:17,192 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:03:04] 2025-06-04 13:47:17,273 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:03:04]  *** Error codes and diagnostics ***
[2025-06-04 18:03:04]     "exeErrorCode": 0,
[2025-06-04 18:03:04]     "exeErrorDiag": "",
[2025-06-04 18:03:04]     "pilotErrorCode": 0,
[2025-06-04 18:03:04]     "pilotErrorDiag": "",
[2025-06-04 18:03:04]  *** Listing of results directory ***
[2025-06-04 18:03:04] total 394704
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:55 queuedata.json
[2025-06-04 18:03:04] -rwx------. 1 boinc boinc     37140 Jun  3 19:55 runpilot2-wrapper.sh
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:03:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:47 run_atlas
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:47 job.xml
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc      6392 Jun  4 11:47 init_data.xml
[2025-06-04 18:03:04] -rw-r--r--. 2 boinc boinc 213518061 Jun  4 11:47 EVNT.45006593._001647.pool.root.1
[2025-06-04 18:03:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:47 start_atlas.sh
[2025-06-04 18:03:04] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:47 shared
[2025-06-04 18:03:04] -rw-r--r--. 2 boinc boinc    508881 Jun  4 11:47 input.tar.gz
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:47 boinc_lockfile
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:47 pandaJob.out
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc    986766 Jun  4 11:50 agis_schedconf.cvmfs.json
[2025-06-04 18:03:04] drwx------. 4 boinc boinc      4096 Jun  4 11:50 pilot3
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc 183669893 Jun  4 15:44 HITS.45006595._041103.pool.root.1
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:44 boinc_task_state.xml
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc      1014 Jun  4 15:45 memory_monitor_summary.json
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc   1598969 Jun  4 15:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc    380913 Jun  4 15:45 log.45006595._041103.job.log.tgz.1
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc        95 Jun  4 15:46 pilot_heartbeat.json
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc      7687 Jun  4 15:46 heartbeat.json
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc      4416 Jun  4 15:47 pilotlog.txt
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc   1203617 Jun  4 15:47 log.45006595._041103.job.log.1
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc       357 Jun  4 15:47 output.list
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:47 runtime_log
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc   1607680 Jun  4 15:47 result.tar.gz
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc      8659 Jun  4 15:47 runtime_log.err
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc       657 Jun  4 15:47 5FbLDmO2kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDUZKDm7fmIyn.diag
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:03 boinc_mmap_file
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:03 wrapper_checkpoint.txt
[2025-06-04 18:03:04] -rw-r--r--. 1 boinc boinc     20530 Jun  4 18:03 stderr.txt
[2025-06-04 18:03:04] HITS file was successfully produced:
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc 183669893 Jun  4 15:44 shared/HITS.pool.root.1
[2025-06-04 18:03:04]  *** Contents of shared directory: ***
[2025-06-04 18:03:04] total 389972
[2025-06-04 18:03:04] -rw-r--r--. 2 boinc boinc 213518061 Jun  4 11:47 ATLAS.root_0
[2025-06-04 18:03:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:47 start_atlas.sh
[2025-06-04 18:03:04] -rw-r--r--. 2 boinc boinc    508881 Jun  4 11:47 input.tar.gz
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc 183669893 Jun  4 15:44 HITS.pool.root.1
[2025-06-04 18:03:04] -rw-------. 1 boinc boinc   1607680 Jun  4 15:47 result.tar.gz
18:03:06 (22710): run_atlas exited; CPU time 51493.827000
18:03:06 (22710): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN