Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:20:08 (2846): wrapper (7.7.26015): starting
07:20:08 (2846): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:20:08] Arguments: --nthreads 8
[2025-06-04 07:20:08] Threads: 8
[2025-06-04 07:20:08] Checking for CVMFS
[2025-06-04 07:20:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:20:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:20:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:20:11] 2.11.2.0 23601 32795 97680 146769 3 19 21196488 25165825 4298 130560 0 17000138 99.802 19185445 2132 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:20:11] CVMFS is ok
[2025-06-04 07:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:20:11] Checking for apptainer binary...
[2025-06-04 07:20:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:20:11] Running /usr/bin/apptainer --version
[2025-06-04 07:20:11] apptainer version 1.3.2-1.el7
[2025-06-04 07:20:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:20:21] cg-vwn275.simple-grid.lan
[2025-06-04 07:20:21] apptainer works
[2025-06-04 07:20:21] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:20:21] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:20:21] Starting ATLAS job with PandaID=6677677436
[2025-06-04 07:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:27:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:27:00] 2025-06-04 09:12:22,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:27:00] 2025-06-04 09:12:22,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:27:00] 2025-06-04 09:12:22,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:27:00] 2025-06-04 09:12:22,117 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:27:00] 2025-06-04 09:12:22,118 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,120 | INFO     | sum of deviations: 43418633710.5
[2025-06-04 11:27:00] 2025-06-04 09:12:22,120 | INFO     | mean x: 1749021631.5
[2025-06-04 11:27:00] 2025-06-04 09:12:22,120 | INFO     | mean y: 2451716.0694444445
[2025-06-04 11:27:00] 2025-06-04 09:12:22,121 | INFO     | -- intersect: -24299489438.278797
[2025-06-04 11:27:00] 2025-06-04 09:12:22,121 | INFO     | intersect: -24299489438.278797
[2025-06-04 11:27:00] 2025-06-04 09:12:22,121 | INFO     | chi2: 6.2898645738765
[2025-06-04 11:27:00] 2025-06-04 09:12:22,122 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,130 | INFO     | sum of deviations: 56605677241.99999
[2025-06-04 11:27:00] 2025-06-04 09:12:22,131 | INFO     | mean x: 1749021479.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,131 | INFO     | mean y: 2461008.18957346
[2025-06-04 11:27:00] 2025-06-04 09:12:22,131 | INFO     | -- intersect: -33986594671.467262
[2025-06-04 11:27:00] 2025-06-04 09:12:22,131 | INFO     | intersect: -33986594671.467262
[2025-06-04 11:27:00] 2025-06-04 09:12:22,132 | INFO     | chi2: 5.578514120320177
[2025-06-04 11:27:00] 2025-06-04 09:12:22,132 | INFO     | current chi2=5.578514120320177 (change=11.30947169372696 %)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,132 | INFO     | right removable region: 210
[2025-06-04 11:27:00] 2025-06-04 09:12:22,132 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,134 | INFO     | sum of deviations: -29181472494.999992
[2025-06-04 11:27:00] 2025-06-04 09:12:22,134 | INFO     | mean x: 1749021784.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,134 | INFO     | mean y: 2503859.075829384
[2025-06-04 11:27:00] 2025-06-04 09:12:22,135 | INFO     | -- intersect: 17524613208.085087
[2025-06-04 11:27:00] 2025-06-04 09:12:22,135 | INFO     | intersect: 17524613208.085087
[2025-06-04 11:27:00] 2025-06-04 09:12:22,135 | INFO     | chi2: 1.7429997812089346
[2025-06-04 11:27:00] 2025-06-04 09:12:22,135 | INFO     | current chi2=1.7429997812089346 (change=72.28875501631494 %)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,136 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 11:27:00] 2025-06-04 09:12:22,137 | INFO     | sum of deviations: -53751291797.99999
[2025-06-04 11:27:00] 2025-06-04 09:12:22,138 | INFO     | mean x: 1749021936.5
[2025-06-04 11:27:00] 2025-06-04 09:12:22,138 | INFO     | mean y: 2522220.485436893
[2025-06-04 11:27:00] 2025-06-04 09:12:22,138 | INFO     | -- intersect: 34685335011.5549
[2025-06-04 11:27:00] 2025-06-04 09:12:22,138 | INFO     | intersect: 34685335011.5549
[2025-06-04 11:27:00] 2025-06-04 09:12:22,144 | INFO     | chi2: 0.9773993381018382
[2025-06-04 11:27:00] 2025-06-04 09:12:22,144 | INFO     | current chi2=0.9773993381018382 (change=43.924299438298284 %)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,144 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,146 | INFO     | sum of deviations: -47787297947.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,146 | INFO     | mean x: 1749022089.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,146 | INFO     | mean y: 2517491.3283582088
[2025-06-04 11:27:00] 2025-06-04 09:12:22,146 | INFO     | -- intersect: 33195931489.55614
[2025-06-04 11:27:00] 2025-06-04 09:12:22,146 | INFO     | intersect: 33195931489.55614
[2025-06-04 11:27:00] 2025-06-04 09:12:22,147 | INFO     | chi2: 0.9713734264678306
[2025-06-04 11:27:00] 2025-06-04 09:12:22,147 | INFO     | current chi2=0.9713734264678306 (change=0.6165250373209998 %)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,147 | INFO     | left removable region: 30
[2025-06-04 11:27:00] 2025-06-04 09:12:22,147 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,148 | INFO     | sum of deviations: -12468746022.5
[2025-06-04 11:27:00] 2025-06-04 09:12:22,149 | INFO     | mean x: 1749022363.5
[2025-06-04 11:27:00] 2025-06-04 09:12:22,149 | INFO     | mean y: 2509802.638888889
[2025-06-04 11:27:00] 2025-06-04 09:12:22,149 | INFO     | -- intersect: 12062184869.475668
[2025-06-04 11:27:00] 2025-06-04 09:12:22,149 | INFO     | intersect: 12062184869.475668
[2025-06-04 11:27:00] 2025-06-04 09:12:22,149 | INFO     | chi2: 0.1053569917768601
[2025-06-04 11:27:00] 2025-06-04 09:12:22,149 | INFO     | -- intersect: 12062184869.475668
[2025-06-04 11:27:00] 2025-06-04 09:12:22,150 | INFO     | current memory leak: -6.90 B/s (using 180 data points, chi2=0.11)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,150 | INFO     | ..............................
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . Timing measurements:
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . get job = 0 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . initial setup = 6 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . payload setup = 146 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . stage-in = 0 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . payload execution = 13315 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . stage-out = 3 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | . log creation = 1 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,151 | INFO     | ..............................
[2025-06-04 11:27:00] 2025-06-04 09:12:22,290 | INFO     | 
[2025-06-04 11:27:00] 2025-06-04 09:12:22,290 | INFO     | job summary report
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | --------------------------------------------------
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | PanDA job id: 6677677436
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | task id: 45006595
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | errors: (none)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | pilot state: finished 
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | transexitcode: 0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | exeerrorcode: 0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | exeerrordiag: 
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | exitcode: 0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,291 | INFO     | exitmsg: OK
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | cpuconsumptiontime: 49970 s
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | nevents: 400
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | neventsw: 0
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | pid: 15488
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | pgrp: 15488
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | corecount: 8
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | event service: False
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 66: 2405508, 76: 2405536, 83: 2405798, 87: 2405854, 13466: 2435749
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | --------------------------------------------------
[2025-06-04 11:27:00] 2025-06-04 09:12:22,292 | INFO     | 
[2025-06-04 11:27:00] 2025-06-04 09:12:22,293 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 11:27:00] 2025-06-04 09:12:22,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:27:00] 2025-06-04 09:12:22,451 | INFO     | job 6677677436 has completed (purged errors)
[2025-06-04 11:27:00] 2025-06-04 09:12:22,451 | INFO     | overall cleanup function is called
[2025-06-04 11:27:00] 2025-06-04 09:12:23,460 | INFO     | --- collectZombieJob: --- 10, [15488]
[2025-06-04 11:27:00] 2025-06-04 09:12:23,460 | INFO     | zombie collector waiting for pid 15488
[2025-06-04 11:27:00] 2025-06-04 09:12:23,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:27:00] 2025-06-04 09:12:23,461 | INFO     | collected zombie processes
[2025-06-04 11:27:00] 2025-06-04 09:12:23,461 | INFO     | will attempt to kill all subprocesses of pid=15488
[2025-06-04 11:27:00] 2025-06-04 09:12:23,582 | INFO     | process IDs to be killed: [15488] (in reverse order)
[2025-06-04 11:27:00] 2025-06-04 09:12:23,779 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:27:00] 2025-06-04 09:12:23,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:27:00] 2025-06-04 09:12:23,786 | INFO     | did not find any defunct processes belonging to 15488
[2025-06-04 11:27:00] 2025-06-04 09:12:23,792 | INFO     | did not find any defunct processes belonging to 15488
[2025-06-04 11:27:00] 2025-06-04 09:12:23,792 | INFO     | ready for new job
[2025-06-04 11:27:00] 2025-06-04 09:12:23,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:27:00] 2025-06-04 09:12:23,798 | INFO     | **************************************
[2025-06-04 11:27:00] 2025-06-04 09:12:23,798 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:27:00] 2025-06-04 09:12:23,798 | INFO     | **************************************
[2025-06-04 11:27:00] 2025-06-04 09:12:23,798 | INFO     | 
[2025-06-04 11:27:00] 2025-06-04 09:12:23,799 | INFO     | pilot is running in a VM
[2025-06-04 11:27:00] 2025-06-04 09:12:23,799 | INFO     | architecture information:
[2025-06-04 11:27:00] 2025-06-04 09:12:23,825 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:27:00] 2025-06-04 09:12:24,240 | INFO     | cat /etc/os-release:
[2025-06-04 11:27:00] NAME="CentOS Linux"
[2025-06-04 11:27:00] VERSION="7 (Core)"
[2025-06-04 11:27:00] ID="centos"
[2025-06-04 11:27:00] ID_LIKE="rhel fedora"
[2025-06-04 11:27:00] VERSION_ID="7"
[2025-06-04 11:27:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:27:00] ANSI_COLOR="0;31"
[2025-06-04 11:27:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:27:00] HOME_URL="https://www.centos.org/"
[2025-06-04 11:27:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:27:00] 
[2025-06-04 11:27:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:27:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:27:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:27:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:27:00] 
[2025-06-04 11:27:00] 2025-06-04 09:12:24,240 | INFO     | **************************************
[2025-06-04 11:27:00] 2025-06-04 09:12:24,743 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 11:27:00] 2025-06-04 09:12:25,012 | INFO     | sufficient remaining disk space (496326672384 B)
[2025-06-04 11:27:00] 2025-06-04 09:12:25,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:27:00] 2025-06-04 09:12:25,013 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:27:00] 2025-06-04 09:12:25,013 | INFO     | update_server=False
[2025-06-04 11:27:00] 2025-06-04 09:12:25,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:27:00] 2025-06-04 09:12:25,016 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:27:00] 2025-06-04 09:12:25,017 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:27:00] 2025-06-04 09:12:25,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:27:00] 2025-06-04 09:12:25,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:27:00] 2025-06-04 09:12:25,048 | INFO     | all data control threads have been joined
[2025-06-04 11:27:00] 2025-06-04 09:12:25,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:27:00] 2025-06-04 09:12:25,347 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:27:00] 2025-06-04 09:12:25,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:27:00] 2025-06-04 09:12:25,348 | INFO     | will abort loop
[2025-06-04 11:27:00] 2025-06-04 09:12:25,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:27:00] 2025-06-04 09:12:26,019 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,031 | INFO     | all job control threads have been joined
[2025-06-04 11:27:00] 2025-06-04 09:12:26,054 | INFO     | [data] control thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,086 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,153 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,321 | INFO     | all payload control threads have been joined
[2025-06-04 11:27:00] 2025-06-04 09:12:26,353 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,357 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,491 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:26,757 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:27,037 | INFO     | [job] control thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:27,197 | INFO     | [job] validate thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:27,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:27:00] 2025-06-04 09:12:27,327 | INFO     | [payload] control thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:27,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:27,397 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:27,963 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:28,310 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:28,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:27:00] 2025-06-04 09:12:32,515 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:27:00] 2025-06-04 09:12:33,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949802424128)>', '<ExcThread(monitor, started 139949068240640)>']
[2025-06-04 11:27:00] 2025-06-04 09:12:34,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:27:00] 2025-06-04 09:12:34,070 | INFO     | [monitor] control thread has ended
[2025-06-04 11:27:00] 2025-06-04 09:12:38,506 | INFO     | all workflow threads have been joined
[2025-06-04 11:27:00] 2025-06-04 09:12:38,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:27:00] 2025-06-04 09:12:38,507 | INFO     | traces error code: 0
[2025-06-04 11:27:00] 2025-06-04 09:12:38,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:27:00] 2025-06-04 09:12:38,900 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:27:00] 2025-06-04 09:12:38,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:27:00] 2025-06-04 09:12:39,088 [wrapper] pilotpid: 6895
[2025-06-04 11:27:00] 2025-06-04 09:12:39,184 [wrapper] Pilot exit status: 0
[2025-06-04 11:27:00] 2025-06-04 09:12:39,604 [wrapper] pandaids: 6677677436
[2025-06-04 11:27:00] 2025-06-04 09:12:40,332 [wrapper] cleanup supervisor_pilot 27101 6896
[2025-06-04 11:27:00] 2025-06-04 09:12:40,465 [wrapper] Test setup, not cleaning
[2025-06-04 11:27:00] 2025-06-04 09:12:40,589 [wrapper] apfmon messages muted
[2025-06-04 11:27:00] 2025-06-04 09:12:40,723 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:27:00] 2025-06-04 09:12:40,823 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:27:00]  *** Error codes and diagnostics ***
[2025-06-04 11:27:00]     "exeErrorCode": 0,
[2025-06-04 11:27:00]     "exeErrorDiag": "",
[2025-06-04 11:27:00]     "pilotErrorCode": 0,
[2025-06-04 11:27:00]     "pilotErrorDiag": "",
[2025-06-04 11:27:00]  *** Listing of results directory ***
[2025-06-04 11:27:00] total 393692
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:41 queuedata.json
[2025-06-04 11:27:00] -rwx------. 1 boinc boinc     37140 Jun  3 17:41 runpilot2-wrapper.sh
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:27:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:20 run_atlas
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:20 job.xml
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc      6390 Jun  4 07:20 init_data.xml
[2025-06-04 11:27:00] -rw-r--r--. 2 boinc boinc 214836060 Jun  4 07:20 EVNT.45006593._001496.pool.root.1
[2025-06-04 11:27:00] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:20 start_atlas.sh
[2025-06-04 11:27:00] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:20 shared
[2025-06-04 11:27:00] -rw-r--r--. 2 boinc boinc    508879 Jun  4 07:20 input.tar.gz
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:20 boinc_lockfile
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:20 pandaJob.out
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc    986745 Jun  4 07:23 agis_schedconf.cvmfs.json
[2025-06-04 11:27:00] drwx------. 4 boinc boinc      4096 Jun  4 07:23 pilot3
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc 181348181 Jun  4 11:09 HITS.45006595._037246.pool.root.1
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc       530 Jun  4 11:09 boinc_task_state.xml
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc      1013 Jun  4 11:10 memory_monitor_summary.json
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc   1603667 Jun  4 11:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc    386911 Jun  4 11:10 log.45006595._037246.job.log.tgz.1
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc        95 Jun  4 11:11 pilot_heartbeat.json
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc      7690 Jun  4 11:12 heartbeat.json
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc      4725 Jun  4 11:12 pilotlog.txt
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc   1178604 Jun  4 11:12 log.45006595._037246.job.log.1
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc       357 Jun  4 11:12 output.list
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:12 runtime_log
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc   1587200 Jun  4 11:12 result.tar.gz
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc       657 Jun  4 11:12 uOxMDmWwig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIskKDm1N6mTn.diag
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:12 runtime_log.err
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:26 boinc_mmap_file
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:27 wrapper_checkpoint.txt
[2025-06-04 11:27:00] -rw-r--r--. 1 boinc boinc     20524 Jun  4 11:27 stderr.txt
[2025-06-04 11:27:00] HITS file was successfully produced:
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc 181348181 Jun  4 11:09 shared/HITS.pool.root.1
[2025-06-04 11:27:00]  *** Contents of shared directory: ***
[2025-06-04 11:27:00] total 388972
[2025-06-04 11:27:00] -rw-r--r--. 2 boinc boinc 214836060 Jun  4 07:20 ATLAS.root_0
[2025-06-04 11:27:00] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:20 start_atlas.sh
[2025-06-04 11:27:00] -rw-r--r--. 2 boinc boinc    508879 Jun  4 07:20 input.tar.gz
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc 181348181 Jun  4 11:09 HITS.pool.root.1
[2025-06-04 11:27:00] -rw-------. 1 boinc boinc   1587200 Jun  4 11:12 result.tar.gz
11:27:02 (2846): run_atlas exited; CPU time 50164.577868
11:27:02 (2846): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN