Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:00:16 (122416): wrapper (7.7.26015): starting
17:00:16 (122416): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:00:16] Arguments: --nthreads 8
[2025-06-03 17:00:16] Threads: 8
[2025-06-03 17:00:16] Checking for CVMFS
[2025-06-03 17:00:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:00:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:00:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:00:17] 2.11.2.0 7041 27855 216796 146755 0 439 15530193 18432000 13718 130560 0 109762387 99.578 91533776 30427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 17:00:17] CVMFS is ok
[2025-06-03 17:00:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:00:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:00:17] Further information can be found at the LHC@home message board.
[2025-06-03 17:00:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:00:17] Checking for apptainer binary...
[2025-06-03 17:00:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:00:17] Running /usr/bin/apptainer --version
[2025-06-03 17:00:17] apptainer version 1.3.2-1.el7
[2025-06-03 17:00:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:00:22] c-211-33-2.aglt2.org
[2025-06-03 17:00:22] apptainer works
[2025-06-03 17:00:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:00:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:00:22] Starting ATLAS job with PandaID=6677734242
[2025-06-03 17:00:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:11:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:11:11]  guid=645f4b4c-7032-426e-a1a4-2545959f57e9
[2025-06-03 18:11:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 18:11:11]  is_altstaged=None
[2025-06-03 18:11:11]  is_tar=False
[2025-06-03 18:11:11]  lfn=log.45006595._037725.job.log.tgz.1
[2025-06-03 18:11:11]  mtime=0
[2025-06-03 18:11:11]  protocol_id=None
[2025-06-03 18:11:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:11:11]  replicas=None
[2025-06-03 18:11:11]  scope=mc23_13p6TeV
[2025-06-03 18:11:11]  status=None
[2025-06-03 18:11:11]  status_code=0
[2025-06-03 18:11:11]  storage_token=
[2025-06-03 18:11:11]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677734242/log.45006595._037725.job.log.tgz.1
[2025-06-03 18:11:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/61/log.45006595._037725.job.log.tgz.1
[2025-06-03 18:11:11]  workdir=None
[2025-06-03 18:11:11] ]
[2025-06-03 18:11:11] 2025-06-03 22:10:54,126 | INFO     | transferring file log.45006595._037725.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677734242/log.45006595._037725.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:11:11] 2025-06-03 22:10:54,126 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677734242/log.45006595._037725.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._037725.job
[2025-06-03 18:11:11] 2025-06-03 22:10:54,149 | INFO     | adding to output.list: log.45006595._037725.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/61/log.45006595._037725.job.log.tg
[2025-06-03 18:11:11] 2025-06-03 22:10:54,150 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:11:11] 2025-06-03 22:10:54,150 | INFO     | summary of transferred files:
[2025-06-03 18:11:11] 2025-06-03 22:10:54,150 | INFO     |  -- lfn=log.45006595._037725.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:11:11] 2025-06-03 22:10:54,150 | INFO     | stage-out finished correctly
[2025-06-03 18:11:11] 2025-06-03 22:10:56,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:11:11] 2025-06-03 22:10:56,259 | INFO     | job 6677734242 has state=finished
[2025-06-03 18:11:11] 2025-06-03 22:10:56,260 | INFO     | preparing for final server update for job 6677734242 in state='finished'
[2025-06-03 18:11:11] 2025-06-03 22:10:56,260 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:11:11] 2025-06-03 22:10:56,261 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:11:11] 2025-06-03 22:10:56,261 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:11:11] 2025-06-03 22:10:56,261 | INFO     | job 6677734242 has finished - writing final server update
[2025-06-03 18:11:11] 2025-06-03 22:10:56,261 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:11:11] 2025-06-03 22:10:56,266 | INFO     | executing command: lscpu
[2025-06-03 18:11:11] 2025-06-03 22:10:56,313 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:11:11] 2025-06-03 22:10:58,764 | WARNING  | process 159106 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 18:11:11] 2025-06-03 22:10:58,764 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677734242/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:11:11] 2025-06-03 22:10:59,020 | INFO     | number of running child processes to parent process 159106: 1
[2025-06-03 18:11:11] 2025-06-03 22:10:59,020 | INFO     | maximum number of monitored processes: 6
[2025-06-03 18:11:11] 2025-06-03 22:10:59,274 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 18:11:11] 2025-06-03 22:10:59,274 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677734242/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:11:11] 2025-06-03 22:10:59,275 | INFO     | extracted standard info from prmon json
[2025-06-03 18:11:11] 2025-06-03 22:10:59,275 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:11:11] 2025-06-03 22:10:59,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:11:11] 2025-06-03 22:10:59,275 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:11:11] 2025-06-03 22:10:59,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:11:11] 2025-06-03 22:10:59,276 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:11:11] 2025-06-03 22:10:59,276 | INFO     | sum of square deviations: 70364110.0
[2025-06-03 18:11:11] 2025-06-03 22:10:59,276 | INFO     | sum of deviations: 2379684725.000001
[2025-06-03 18:11:11] 2025-06-03 22:10:59,276 | INFO     | mean x: 1748986644.0
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | mean y: 2453674.6393442624
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | -- intersect: -59147541983.03066
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | intersect: -59147541983.03066
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | chi2: 0.05154668579955469
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | -- intersect: -59147541983.03066
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | current memory leak: 33.82 B/s (using 61 data points, chi2=0.05)
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | ..............................
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . Timing measurements:
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . get job = 0 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . initial setup = 3 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . payload setup = 25 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . stage-in = 0 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . payload execution = 4156 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . stage-out = 0 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | . log creation = 0 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,277 | INFO     | ..............................
[2025-06-03 18:11:11] 2025-06-03 22:10:59,621 | INFO     | 
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | job summary report
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | --------------------------------------------------
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | PanDA job id: 6677734242
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | task id: 45006595
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | errors: (none)
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | pilot state: finished 
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | transexitcode: 0
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | exeerrorcode: 0
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | exeerrordiag: 
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | exitcode: 0
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | exitmsg: OK
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | cpuconsumptiontime: 28462 s
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | nevents: 400
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | neventsw: 0
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | pid: 159106
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | pgrp: 159106
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | corecount: 8
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | event service: False
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | sizes: {0: 2404957, 1: 2405212, 10: 2405418, 11: 2405446, 4185: 2431178, 4187: 2440119, 4189: 2440303, 4192: 2440473}
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | --------------------------------------------------
[2025-06-03 18:11:11] 2025-06-03 22:10:59,622 | INFO     | 
[2025-06-03 18:11:11] 2025-06-03 22:10:59,623 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | job 6677734242 has completed (purged errors)
[2025-06-03 18:11:11] 2025-06-03 22:10:59,642 | INFO     | overall cleanup function is called
[2025-06-03 18:11:11] 2025-06-03 22:11:00,650 | INFO     | --- collectZombieJob: --- 10, [159106]
[2025-06-03 18:11:11] 2025-06-03 22:11:00,650 | INFO     | zombie collector waiting for pid 159106
[2025-06-03 18:11:11] 2025-06-03 22:11:00,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:11:11] 2025-06-03 22:11:00,650 | INFO     | collected zombie processes
[2025-06-03 18:11:11] 2025-06-03 22:11:00,650 | INFO     | will attempt to kill all subprocesses of pid=159106
[2025-06-03 18:11:11] 2025-06-03 22:11:00,817 | INFO     | process IDs to be killed: [159106] (in reverse order)
[2025-06-03 18:11:11] 2025-06-03 22:11:00,907 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:11:11] 2025-06-03 22:11:00,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:11:11] 2025-06-03 22:11:00,913 | INFO     | did not find any defunct processes belonging to 159106
[2025-06-03 18:11:11] 2025-06-03 22:11:00,918 | INFO     | did not find any defunct processes belonging to 159106
[2025-06-03 18:11:11] 2025-06-03 22:11:00,918 | INFO     | ready for new job
[2025-06-03 18:11:11] 2025-06-03 22:11:00,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:11:11] 2025-06-03 22:11:00,920 | INFO     | **************************************
[2025-06-03 18:11:11] 2025-06-03 22:11:00,920 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:11:11] 2025-06-03 22:11:00,920 | INFO     | **************************************
[2025-06-03 18:11:11] 2025-06-03 22:11:00,920 | INFO     | 
[2025-06-03 18:11:11] 2025-06-03 22:11:00,923 | INFO     | architecture information:
[2025-06-03 18:11:11] 2025-06-03 22:11:00,923 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:11:11] 2025-06-03 22:11:00,936 | INFO     | cat /etc/os-release:
[2025-06-03 18:11:11] NAME="CentOS Linux"
[2025-06-03 18:11:11] VERSION="7 (Core)"
[2025-06-03 18:11:11] ID="centos"
[2025-06-03 18:11:11] ID_LIKE="rhel fedora"
[2025-06-03 18:11:11] VERSION_ID="7"
[2025-06-03 18:11:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:11:11] ANSI_COLOR="0;31"
[2025-06-03 18:11:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:11:11] HOME_URL="https://www.centos.org/"
[2025-06-03 18:11:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:11:11] 
[2025-06-03 18:11:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:11:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:11:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:11:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:11:11] 
[2025-06-03 18:11:11] 2025-06-03 22:11:00,936 | INFO     | **************************************
[2025-06-03 18:11:11] 2025-06-03 22:11:01,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 18:11:11] 2025-06-03 22:11:01,456 | INFO     | sufficient remaining disk space (103879278592 B)
[2025-06-03 18:11:11] 2025-06-03 22:11:01,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | INFO     | update_server=False
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:11:11] 2025-06-03 22:11:01,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:11:11] 2025-06-03 22:11:01,522 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 18:11:11] 2025-06-03 22:11:01,523 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 18:11:11] 2025-06-03 22:11:01,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:11:11] 2025-06-03 22:11:01,523 | INFO     | will abort loop
[2025-06-03 18:11:11] 2025-06-03 22:11:02,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:11:11] 2025-06-03 22:11:02,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:11:11] 2025-06-03 22:11:02,463 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:02,528 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:02,550 | INFO     | all data control threads have been joined
[2025-06-03 18:11:11] 2025-06-03 22:11:02,665 | INFO     | all job control threads have been joined
[2025-06-03 18:11:11] 2025-06-03 22:11:02,672 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:02,922 | INFO     | all payload control threads have been joined
[2025-06-03 18:11:11] 2025-06-03 22:11:03,175 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,207 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,555 | INFO     | [data] control thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,671 | INFO     | [job] control thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,739 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,807 | INFO     | [job] validate thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,913 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,923 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:03,926 | INFO     | [payload] control thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:04,257 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:04,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:11:11] 2025-06-03 22:11:05,342 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:06,270 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:11:11] 2025-06-03 22:11:06,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518830032704)>', '<ExcThread(monitor, started 140518168192768)>']
[2025-06-03 18:11:11] 2025-06-03 22:11:07,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:11:11] 2025-06-03 22:11:07,484 | INFO     | [monitor] control thread has ended
[2025-06-03 18:11:11] 2025-06-03 22:11:11,531 | INFO     | all workflow threads have been joined
[2025-06-03 18:11:11] 2025-06-03 22:11:11,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:11:11] 2025-06-03 22:11:11,532 | INFO     | traces error code: 0
[2025-06-03 18:11:11] 2025-06-03 22:11:11,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:11:11] 2025-06-03 22:11:11,619 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:11:11] 2025-06-03 22:11:11,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:11:11] 2025-06-03 22:11:11,623 [wrapper] pilotpid: 135239
[2025-06-03 18:11:11] 2025-06-03 22:11:11,625 [wrapper] Pilot exit status: 0
[2025-06-03 18:11:11] 2025-06-03 22:11:11,631 [wrapper] pandaids: 6677734242
[2025-06-03 18:11:11] 2025-06-03 22:11:11,676 [wrapper] cleanup supervisor_pilot 156407 135240
[2025-06-03 18:11:11] 2025-06-03 22:11:11,678 [wrapper] Test setup, not cleaning
[2025-06-03 18:11:11] 2025-06-03 22:11:11,680 [wrapper] apfmon messages muted
[2025-06-03 18:11:11] 2025-06-03 22:11:11,682 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:11:11] 2025-06-03 22:11:11,684 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:11:11]  *** Error codes and diagnostics ***
[2025-06-03 18:11:11]     "exeErrorCode": 0,
[2025-06-03 18:11:11]     "exeErrorDiag": "",
[2025-06-03 18:11:11]     "pilotErrorCode": 0,
[2025-06-03 18:11:11]     "pilotErrorDiag": "",
[2025-06-03 18:11:11]  *** Listing of results directory ***
[2025-06-03 18:11:11] total 389804
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 11:50 pilot3.tar.gz
[2025-06-03 18:11:11] -rwx------ 1 boincer umatlas     37140 Jun  3 11:53 runpilot2-wrapper.sh
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 11:53 queuedata.json
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas       100 Jun  3 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:11:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 17:00 run_atlas
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas       105 Jun  3 17:00 job.xml
[2025-06-03 18:11:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 17:00 start_atlas.sh
[2025-06-03 18:11:11] drwxrwx--x 2 boincer umatlas      4096 Jun  3 17:00 shared
[2025-06-03 18:11:11] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 17:00 input.tar.gz
[2025-06-03 18:11:11] -rw-r--r-- 2 boincer umatlas 214430318 Jun  3 17:00 EVNT.45006593._001514.pool.root.1
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas         0 Jun  3 17:00 boinc_lockfile
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 17:00 pandaJob.out
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas    986853 Jun  3 17:00 agis_schedconf.cvmfs.json
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas   1603667 Jun  3 17:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:11:11] drwx------ 4 boincer umatlas      4096 Jun  3 17:00 pilot3
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas      6298 Jun  3 18:09 init_data.xml
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas 179438332 Jun  3 18:10 HITS.45006595._037725.pool.root.1
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas       529 Jun  3 18:10 boinc_task_state.xml
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas      1051 Jun  3 18:10 memory_monitor_summary.json
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas        95 Jun  3 18:10 pilot_heartbeat.json
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas    303504 Jun  3 18:10 log.45006595._037725.job.log.tgz.1
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas      7742 Jun  3 18:10 heartbeat.json
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 18:11 boinc_mmap_file
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas        27 Jun  3 18:11 wrapper_checkpoint.txt
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas      4663 Jun  3 18:11 pilotlog.txt
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas    420983 Jun  3 18:11 log.45006595._037725.job.log.1
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas       357 Jun  3 18:11 output.list
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas       620 Jun  3 18:11 runtime_log
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas    747520 Jun  3 18:11 result.tar.gz
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas       658 Jun  3 18:11 sQ1NDm77ig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmU9YKDmedEjBo.diag
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas      8669 Jun  3 18:11 runtime_log.err
[2025-06-03 18:11:11] -rw-r--r-- 1 boincer umatlas     21314 Jun  3 18:11 stderr.txt
[2025-06-03 18:11:11] HITS file was successfully produced:
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas 179438332 Jun  3 18:10 shared/HITS.pool.root.1
[2025-06-03 18:11:11]  *** Contents of shared directory: ***
[2025-06-03 18:11:11] total 385896
[2025-06-03 18:11:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 17:00 start_atlas.sh
[2025-06-03 18:11:11] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 17:00 input.tar.gz
[2025-06-03 18:11:11] -rw-r--r-- 2 boincer umatlas 214430318 Jun  3 17:00 ATLAS.root_0
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas 179438332 Jun  3 18:10 HITS.pool.root.1
[2025-06-03 18:11:11] -rw------- 1 boincer umatlas    747520 Jun  3 18:11 result.tar.gz
18:11:13 (122416): run_atlas exited; CPU time 28554.415479
18:11:13 (122416): called boinc_finish(0)

</stderr_txt>
]]>

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