Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:34 (1117376): wrapper (7.7.26015): starting
17:04:34 (1117376): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:04:34] Arguments: --nthreads 8
[2025-06-03 17:04:34] Threads: 8
[2025-06-03 17:04:34] Checking for CVMFS
[2025-06-03 17:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:04:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:04:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:04:34] 2.12.6.0 9586 413 68292 146755 3 186 30673498 32935936 1363 16776704 0 1762737 99.998 83368 41332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 17:04:34] CVMFS is ok
[2025-06-03 17:04:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:04:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:04:34] Further information can be found at the LHC@home message board.
[2025-06-03 17:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:04:34] Checking for apptainer binary...
[2025-06-03 17:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:04:34] Running /usr/bin/apptainer --version
[2025-06-03 17:04:34] apptainer version 1.4.1-1.el9
[2025-06-03 17:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:04:34] c-8-36.aglt2.org
[2025-06-03 17:04:34] apptainer works
[2025-06-03 17:04:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:04:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:04:35] Starting ATLAS job with PandaID=6677864226
[2025-06-03 17:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:56:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:56:20] 2025-06-03 22:55:52,669 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677864226/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:56:20] 2025-06-03 22:55:52,670 | INFO     | extracted standard info from prmon json
[2025-06-03 18:56:20] 2025-06-03 22:55:52,670 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:56:20] 2025-06-03 22:55:52,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:56:20] 2025-06-03 22:55:52,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:56:20] 2025-06-03 22:55:52,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:56:20] 2025-06-03 22:55:52,674 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:56:20] 2025-06-03 22:55:52,674 | INFO     | sum of square deviations: 401575941.4128451
[2025-06-03 18:56:20] 2025-06-03 22:55:52,675 | INFO     | sum of deviations: 26376705780.48624
[2025-06-03 18:56:20] 2025-06-03 22:55:52,675 | INFO     | mean x: 1748987995.0733945
[2025-06-03 18:56:20] 2025-06-03 22:55:52,675 | INFO     | mean y: 2021446.0642201835
[2025-06-03 18:56:20] 2025-06-03 22:55:52,675 | INFO     | -- intersect: -114876727508.23709
[2025-06-03 18:56:20] 2025-06-03 22:55:52,675 | INFO     | intersect: -114876727508.23709
[2025-06-03 18:56:20] 2025-06-03 22:55:52,676 | INFO     | chi2: 3.4831069199034608
[2025-06-03 18:56:20] 2025-06-03 22:55:52,676 | INFO     | sum of square deviations: 348807951.52884686
[2025-06-03 18:56:20] 2025-06-03 22:55:52,676 | INFO     | sum of deviations: 29322399028.15384
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | mean x: 1748987842.5673077
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | mean y: 2029983.6923076923
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | -- intersect: -147025923910.03424
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | intersect: -147025923910.03424
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | chi2: 3.3476850274580046
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | current chi2=3.3476850274580046 (change=3.88796254492267 %)
[2025-06-03 18:56:20] 2025-06-03 22:55:52,677 | INFO     | right removable region: 103
[2025-06-03 18:56:20] 2025-06-03 22:55:52,678 | INFO     | sum of square deviations: 348809721.38461506
[2025-06-03 18:56:20] 2025-06-03 22:55:52,678 | INFO     | sum of deviations: 4652790191.653843
[2025-06-03 18:56:20] 2025-06-03 22:55:52,678 | INFO     | mean x: 1748988147.5769231
[2025-06-03 18:56:20] 2025-06-03 22:55:52,679 | INFO     | mean y: 2083904.3557692308
[2025-06-03 18:56:20] 2025-06-03 22:55:52,679 | INFO     | -- intersect: -23327755831.93909
[2025-06-03 18:56:20] 2025-06-03 22:55:52,679 | INFO     | intersect: -23327755831.93909
[2025-06-03 18:56:20] 2025-06-03 22:55:52,679 | INFO     | chi2: 1.0197572554757806
[2025-06-03 18:56:20] 2025-06-03 22:55:52,679 | INFO     | current chi2=1.0197572554757806 (change=70.72276909880088 %)
[2025-06-03 18:56:20] 2025-06-03 22:55:52,679 | INFO     | sum of square deviations: 300880801.3535353
[2025-06-03 18:56:20] 2025-06-03 22:55:52,680 | INFO     | sum of deviations: -7631999392.50505
[2025-06-03 18:56:20] 2025-06-03 22:55:52,680 | INFO     | mean x: 1748988300.0808082
[2025-06-03 18:56:20] 2025-06-03 22:55:52,680 | INFO     | mean y: 2122629.3131313133
[2025-06-03 18:56:20] 2025-06-03 22:55:52,680 | INFO     | -- intersect: 44366128520.24044
[2025-06-03 18:56:20] 2025-06-03 22:55:52,680 | INFO     | intersect: 44366128520.24044
[2025-06-03 18:56:20] 2025-06-03 22:55:52,680 | INFO     | chi2: 0.1512790191155694
[2025-06-03 18:56:20] 2025-06-03 22:55:52,681 | INFO     | current chi2=0.1512790191155694 (change=85.16519315717069 %)
[2025-06-03 18:56:20] 2025-06-03 22:55:52,681 | INFO     | sum of square deviations: 257556618.8191491
[2025-06-03 18:56:20] 2025-06-03 22:55:52,681 | INFO     | sum of deviations: -7644863933.372338
[2025-06-03 18:56:20] 2025-06-03 22:55:52,681 | INFO     | mean x: 1748988452.5851064
[2025-06-03 18:56:20] 2025-06-03 22:55:52,681 | INFO     | mean y: 2122679.734042553
[2025-06-03 18:56:20] 2025-06-03 22:55:52,682 | INFO     | -- intersect: 51916062233.51137
[2025-06-03 18:56:20] 2025-06-03 22:55:52,682 | INFO     | intersect: 51916062233.51137
[2025-06-03 18:56:20] 2025-06-03 22:55:52,682 | INFO     | chi2: 0.14266349984453747
[2025-06-03 18:56:20] 2025-06-03 22:55:52,682 | INFO     | current chi2=0.14266349984453747 (change=5.6951184119260585 %)
[2025-06-03 18:56:20] 2025-06-03 22:55:52,682 | INFO     | left removable region: 30
[2025-06-03 18:56:20] 2025-06-03 22:55:52,682 | INFO     | sum of square deviations: 120626775.50684932
[2025-06-03 18:56:20] 2025-06-03 22:55:52,683 | INFO     | sum of deviations: -3495721069.1095896
[2025-06-03 18:56:20] 2025-06-03 22:55:52,683 | INFO     | mean x: 1748988727.0821917
[2025-06-03 18:56:20] 2025-06-03 22:55:52,683 | INFO     | mean y: 2137846.684931507
[2025-06-03 18:56:20] 2025-06-03 22:55:52,683 | INFO     | -- intersect: 50687209359.26317
[2025-06-03 18:56:20] 2025-06-03 22:55:52,683 | INFO     | intersect: 50687209359.26317
[2025-06-03 18:56:20] 2025-06-03 22:55:52,683 | INFO     | chi2: 0.06711419165867508
[2025-06-03 18:56:20] 2025-06-03 22:55:52,684 | INFO     | -- intersect: 50687209359.26317
[2025-06-03 18:56:20] 2025-06-03 22:55:52,684 | INFO     | current memory leak: -28.98 B/s (using 73 data points, chi2=0.07)
[2025-06-03 18:56:20] 2025-06-03 22:55:52,684 | INFO     | ..............................
[2025-06-03 18:56:20] 2025-06-03 22:55:52,684 | INFO     | . Timing measurements:
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . get job = 0 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . initial setup = 2 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . payload setup = 3 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . stage-in = 0 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . payload execution = 6640 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . stage-out = 1 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | . log creation = 0 s
[2025-06-03 18:56:20] 2025-06-03 22:55:52,685 | INFO     | ..............................
[2025-06-03 18:56:20] 2025-06-03 22:55:53,236 | INFO     | 
[2025-06-03 18:56:20] 2025-06-03 22:55:53,236 | INFO     | job summary report
[2025-06-03 18:56:20] 2025-06-03 22:55:53,236 | INFO     | --------------------------------------------------
[2025-06-03 18:56:20] 2025-06-03 22:55:53,236 | INFO     | PanDA job id: 6677864226
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | task id: 45006595
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | errors: (none)
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | pilot state: finished 
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | transexitcode: 0
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | exeerrorcode: 0
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | exeerrordiag: 
[2025-06-03 18:56:20] 2025-06-03 22:55:53,237 | INFO     | exitcode: 0
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | exitmsg: OK
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | cpuconsumptiontime: 41052 s
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | nevents: 400
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | neventsw: 0
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | pid: 1130914
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | pgrp: 1130914
[2025-06-03 18:56:20] 2025-06-03 22:55:53,238 | INFO     | corecount: 8
[2025-06-03 18:56:20] 2025-06-03 22:55:53,239 | INFO     | event service: False
[2025-06-03 18:56:20] 2025-06-03 22:55:53,239 | INFO     | sizes: {0: 2405013, 1: 2405212, 3: 2405418, 11: 2405446, 6648: 2432428, 6649: 2432427, 6650: 2441552, 6652: 2441608, 6659: 2441778}
[2025-06-03 18:56:20] 2025-06-03 22:55:53,239 | INFO     | --------------------------------------------------
[2025-06-03 18:56:20] 2025-06-03 22:55:53,239 | INFO     | 
[2025-06-03 18:56:20] 2025-06-03 22:55:53,239 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 18:56:20] 2025-06-03 22:55:53,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:56:20] 2025-06-03 22:55:53,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:56:20] 2025-06-03 22:55:53,263 | INFO     | job 6677864226 has completed (purged errors)
[2025-06-03 18:56:20] 2025-06-03 22:55:53,263 | INFO     | overall cleanup function is called
[2025-06-03 18:56:20] 2025-06-03 22:55:54,273 | INFO     | --- collectZombieJob: --- 10, [1130914]
[2025-06-03 18:56:20] 2025-06-03 22:55:54,273 | INFO     | zombie collector waiting for pid 1130914
[2025-06-03 18:56:20] 2025-06-03 22:55:54,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:56:20] 2025-06-03 22:55:54,273 | INFO     | collected zombie processes
[2025-06-03 18:56:20] 2025-06-03 22:55:54,273 | INFO     | will attempt to kill all subprocesses of pid=1130914
[2025-06-03 18:56:20] 2025-06-03 22:55:54,632 | INFO     | process IDs to be killed: [1130914] (in reverse order)
[2025-06-03 18:56:20] 2025-06-03 22:55:54,709 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:56:20] 2025-06-03 22:55:54,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:56:20] 2025-06-03 22:55:54,724 | INFO     | did not find any defunct processes belonging to 1130914
[2025-06-03 18:56:20] 2025-06-03 22:55:54,738 | INFO     | did not find any defunct processes belonging to 1130914
[2025-06-03 18:56:20] 2025-06-03 22:55:54,739 | INFO     | ready for new job
[2025-06-03 18:56:20] 2025-06-03 22:55:54,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:56:20] 2025-06-03 22:55:54,742 | INFO     | **************************************
[2025-06-03 18:56:20] 2025-06-03 22:55:54,742 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:56:20] 2025-06-03 22:55:54,742 | INFO     | **************************************
[2025-06-03 18:56:20] 2025-06-03 22:55:54,742 | INFO     | 
[2025-06-03 18:56:20] 2025-06-03 22:55:54,757 | INFO     | architecture information:
[2025-06-03 18:56:20] 2025-06-03 22:55:54,758 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:56:20] 2025-06-03 22:55:54,777 | INFO     | cat /etc/os-release:
[2025-06-03 18:56:20] NAME="CentOS Linux"
[2025-06-03 18:56:20] VERSION="7 (Core)"
[2025-06-03 18:56:20] ID="centos"
[2025-06-03 18:56:20] ID_LIKE="rhel fedora"
[2025-06-03 18:56:20] VERSION_ID="7"
[2025-06-03 18:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:56:20] ANSI_COLOR="0;31"
[2025-06-03 18:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:56:20] HOME_URL="https://www.centos.org/"
[2025-06-03 18:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:56:20] 
[2025-06-03 18:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:56:20] 
[2025-06-03 18:56:20] 2025-06-03 22:55:54,778 | INFO     | **************************************
[2025-06-03 18:56:20] 2025-06-03 22:55:55,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 18:56:20] 2025-06-03 22:55:55,300 | INFO     | sufficient remaining disk space (74981572608 B)
[2025-06-03 18:56:20] 2025-06-03 22:55:55,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:56:20] 2025-06-03 22:55:55,300 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:56:20] 2025-06-03 22:55:55,300 | INFO     | update_server=False
[2025-06-03 18:56:20] 2025-06-03 22:55:55,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:56:20] 2025-06-03 22:55:55,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:56:20] 2025-06-03 22:55:55,301 | INFO     | aborting loop
[2025-06-03 18:56:20] 2025-06-03 22:55:55,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:56:20] 2025-06-03 22:55:55,301 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:56:20] 2025-06-03 22:55:55,302 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:56:20] 2025-06-03 22:55:55,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:56:20] 2025-06-03 22:55:55,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:56:20] 2025-06-03 22:55:55,957 | INFO     | all job control threads have been joined
[2025-06-03 18:56:20] 2025-06-03 22:55:56,150 | INFO     | all payload control threads have been joined
[2025-06-03 18:56:20] 2025-06-03 22:55:56,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:56:20] 2025-06-03 22:55:56,306 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:56,308 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:56,341 | INFO     | all data control threads have been joined
[2025-06-03 18:56:20] 2025-06-03 22:55:56,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:56,554 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:56,815 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:56,928 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:56,964 | INFO     | [job] control thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,126 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,156 | INFO     | [payload] control thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,244 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,308 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,350 | INFO     | [data] control thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,445 | INFO     | [job] validate thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,467 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:55:57,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:56:20] 2025-06-03 22:55:58,812 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:56:00,321 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:56:20] 2025-06-03 22:56:02,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489356556096)>', '<ExcThread(monitor, started 140488506074880)>']
[2025-06-03 18:56:20] 2025-06-03 22:56:03,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:56:20] 2025-06-03 22:56:03,354 | INFO     | [monitor] control thread has ended
[2025-06-03 18:56:20] 2025-06-03 22:56:07,385 | INFO     | all workflow threads have been joined
[2025-06-03 18:56:20] 2025-06-03 22:56:07,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:56:20] 2025-06-03 22:56:07,386 | INFO     | traces error code: 0
[2025-06-03 18:56:20] 2025-06-03 22:56:07,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:56:20] 2025-06-03 22:56:07,568 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:56:20] 2025-06-03 22:56:07,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:56:20] 2025-06-03 22:56:07,610 [wrapper] pilotpid: 1121019
[2025-06-03 18:56:20] 2025-06-03 22:56:07,634 [wrapper] Pilot exit status: 0
[2025-06-03 18:56:20] 2025-06-03 22:56:07,666 [wrapper] pandaids: 6677864226
[2025-06-03 18:56:20] 2025-06-03 22:56:07,728 [wrapper] cleanup supervisor_pilot 1678752 1121020
[2025-06-03 18:56:20] 2025-06-03 22:56:07,733 [wrapper] Test setup, not cleaning
[2025-06-03 18:56:20] 2025-06-03 22:56:07,735 [wrapper] apfmon messages muted
[2025-06-03 18:56:20] 2025-06-03 22:56:07,738 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:56:20] 2025-06-03 22:56:07,740 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:56:20]  *** Error codes and diagnostics ***
[2025-06-03 18:56:20]     "exeErrorCode": 0,
[2025-06-03 18:56:20]     "exeErrorDiag": "",
[2025-06-03 18:56:20]     "pilotErrorCode": 0,
[2025-06-03 18:56:20]     "pilotErrorDiag": "",
[2025-06-03 18:56:20]  *** Listing of results directory ***
[2025-06-03 18:56:20] total 386596
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 13:52 queuedata.json
[2025-06-03 18:56:20] -rwx------. 1 boincer umatlas     37140 Jun  3 13:53 runpilot2-wrapper.sh
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas       100 Jun  3 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:56:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 17:04 run_atlas
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas       105 Jun  3 17:04 job.xml
[2025-06-03 18:56:20] -rw-r--r--. 2 boincer umatlas 214566634 Jun  3 17:04 EVNT.45006593._001643.pool.root.1
[2025-06-03 18:56:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 17:04 start_atlas.sh
[2025-06-03 18:56:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 17:04 shared
[2025-06-03 18:56:20] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 17:04 input.tar.gz
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas         0 Jun  3 17:04 boinc_lockfile
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 17:04 pandaJob.out
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas    986853 Jun  3 17:04 agis_schedconf.cvmfs.json
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:56:20] drwx------. 4 boincer umatlas      4096 Jun  3 17:04 pilot3
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas      6658 Jun  3 18:46 init_data.xml
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas 175586439 Jun  3 18:55 HITS.45006595._041007.pool.root.1
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas       529 Jun  3 18:55 boinc_task_state.xml
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas      1038 Jun  3 18:55 memory_monitor_summary.json
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas        95 Jun  3 18:55 pilot_heartbeat.json
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas    325786 Jun  3 18:55 log.45006595._041007.job.log.tgz.1
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas      7711 Jun  3 18:55 heartbeat.json
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas      4476 Jun  3 18:56 pilotlog.txt
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas    618961 Jun  3 18:56 log.45006595._041007.job.log.1
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas       357 Jun  3 18:56 output.list
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:56 runtime_log
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas    962560 Jun  3 18:56 result.tar.gz
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 18:56 runtime_log.err
[2025-06-03 18:56:20] -rw-------. 1 boincer umatlas       650 Jun  3 18:56 buDODmF0kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZTlKDmqHyAnm.diag
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:56 wrapper_checkpoint.txt
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:56 boinc_mmap_file
[2025-06-03 18:56:20] -rw-r--r--. 1 boincer umatlas     20950 Jun  3 18:56 stderr.txt
[2025-06-03 18:56:21] HITS file was successfully produced:
[2025-06-03 18:56:21] -rw-------. 1 boincer umatlas 175586439 Jun  3 18:55 shared/HITS.pool.root.1
[2025-06-03 18:56:21]  *** Contents of shared directory: ***
[2025-06-03 18:56:21] total 382472
[2025-06-03 18:56:21] -rw-r--r--. 2 boincer umatlas 214566634 Jun  3 17:04 ATLAS.root_0
[2025-06-03 18:56:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 17:04 start_atlas.sh
[2025-06-03 18:56:21] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 17:04 input.tar.gz
[2025-06-03 18:56:21] -rw-------. 1 boincer umatlas 175586439 Jun  3 18:55 HITS.pool.root.1
[2025-06-03 18:56:21] -rw-------. 1 boincer umatlas    962560 Jun  3 18:56 result.tar.gz
18:56:23 (1117376): run_atlas exited; CPU time 41245.823721
18:56:23 (1117376): called boinc_finish(0)

</stderr_txt>
]]>

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