Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:56:29 (1145553): wrapper (7.7.26015): starting
16:56:29 (1145553): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:56:29] Arguments: --nthreads 8
[2025-06-03 16:56:29] Threads: 8
[2025-06-03 16:56:29] Checking for CVMFS
[2025-06-03 16:56:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:56:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:56:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:56:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:56:30] 2.12.6.0 9880 405 76424 146755 3 187 18953819 32935936 3771 16776704 0 1848767 99.998 83300 39932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 16:56:30] CVMFS is ok
[2025-06-03 16:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:56:30] Further information can be found at the LHC@home message board.
[2025-06-03 16:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:56:30] Checking for apptainer binary...
[2025-06-03 16:56:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:56:30] Running /usr/bin/apptainer --version
[2025-06-03 16:56:30] apptainer version 1.4.1-1.el9
[2025-06-03 16:56:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:56:30] c-8-39.aglt2.org
[2025-06-03 16:56:30] apptainer works
[2025-06-03 16:56:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:56:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:56:30] Starting ATLAS job with PandaID=6677864264
[2025-06-03 16:56:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:25:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:25:36]  is_altstaged=None
[2025-06-03 18:25:36]  is_tar=False
[2025-06-03 18:25:36]  lfn=log.45006595._041045.job.log.tgz.1
[2025-06-03 18:25:36]  mtime=0
[2025-06-03 18:25:36]  protocol_id=None
[2025-06-03 18:25:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:25:36]  replicas=None
[2025-06-03 18:25:36]  scope=mc23_13p6TeV
[2025-06-03 18:25:36]  status=None
[2025-06-03 18:25:36]  status_code=0
[2025-06-03 18:25:36]  storage_token=
[2025-06-03 18:25:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677864264/log.45006595._041045.job.log.tgz.1
[2025-06-03 18:25:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/71/log.45006595._041045.job.log.tgz.1
[2025-06-03 18:25:36]  workdir=None
[2025-06-03 18:25:36] ]
[2025-06-03 18:25:36] 2025-06-03 22:25:15,257 | INFO     | transferring file log.45006595._041045.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677864264/log.45006595._041045.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:25:36] 2025-06-03 22:25:15,257 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677864264/log.45006595._041045.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._041045.job
[2025-06-03 18:25:36] 2025-06-03 22:25:15,267 | INFO     | adding to output.list: log.45006595._041045.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/71/log.45006595._041045.job.log.tg
[2025-06-03 18:25:36] 2025-06-03 22:25:15,269 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:25:36] 2025-06-03 22:25:15,269 | INFO     | summary of transferred files:
[2025-06-03 18:25:36] 2025-06-03 22:25:15,269 | INFO     |  -- lfn=log.45006595._041045.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:25:36] 2025-06-03 22:25:15,269 | INFO     | stage-out finished correctly
[2025-06-03 18:25:36] 2025-06-03 22:25:15,515 | INFO     | monitor loop #394: job 0:6677864264 is in state 'finished'
[2025-06-03 18:25:36] 2025-06-03 22:25:15,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:25:36] 2025-06-03 22:25:16,047 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:25:36] 2025-06-03 22:25:18,010 | INFO     | job 6677864264 has state=finished
[2025-06-03 18:25:36] 2025-06-03 22:25:18,010 | INFO     | preparing for final server update for job 6677864264 in state='finished'
[2025-06-03 18:25:36] 2025-06-03 22:25:18,011 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:25:36] 2025-06-03 22:25:18,011 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:25:36] 2025-06-03 22:25:18,012 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:25:36] 2025-06-03 22:25:18,012 | INFO     | job 6677864264 has finished - writing final server update
[2025-06-03 18:25:36] 2025-06-03 22:25:18,012 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:25:36] 2025-06-03 22:25:18,016 | INFO     | executing command: lscpu
[2025-06-03 18:25:36] 2025-06-03 22:25:18,021 | INFO     | monitor loop #395: job 0:6677864264 is in state 'finished'
[2025-06-03 18:25:36] 2025-06-03 22:25:18,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:25:36] 2025-06-03 22:25:18,063 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:25:36] 2025-06-03 22:25:18,791 | INFO     | PID=1149198 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 18:25:36] 2025-06-03 22:25:18,792 | INFO     | .. there are 12 such processes running
[2025-06-03 18:25:36] 2025-06-03 22:25:20,525 | INFO     | monitor loop #396: job 0:6677864264 is in state 'finished'
[2025-06-03 18:25:36] 2025-06-03 22:25:20,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:25:36] 2025-06-03 22:25:21,134 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:25:36] 2025-06-03 22:25:21,134 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677864264/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:25:36] 2025-06-03 22:25:21,135 | INFO     | extracted standard info from prmon json
[2025-06-03 18:25:36] 2025-06-03 22:25:21,136 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:25:36] 2025-06-03 22:25:21,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:25:36] 2025-06-03 22:25:21,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:25:36] 2025-06-03 22:25:21,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:25:36] 2025-06-03 22:25:21,139 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:25:36] 2025-06-03 22:25:21,139 | INFO     | sum of square deviations: 158737860.0
[2025-06-03 18:25:36] 2025-06-03 22:25:21,140 | INFO     | sum of deviations: 6581937728.5
[2025-06-03 18:25:36] 2025-06-03 22:25:21,140 | INFO     | mean x: 1748986940.5
[2025-06-03 18:25:36] 2025-06-03 22:25:21,140 | INFO     | mean y: 2102749.3125
[2025-06-03 18:25:36] 2025-06-03 22:25:21,140 | INFO     | -- intersect: -72518234430.05186
[2025-06-03 18:25:36] 2025-06-03 22:25:21,141 | INFO     | intersect: -72518234430.05186
[2025-06-03 18:25:36] 2025-06-03 22:25:21,141 | INFO     | chi2: 0.7644971314112241
[2025-06-03 18:25:36] 2025-06-03 22:25:21,141 | INFO     | -- intersect: -72518234430.05186
[2025-06-03 18:25:36] 2025-06-03 22:25:21,141 | INFO     | current memory leak: 41.46 B/s (using 80 data points, chi2=0.76)
[2025-06-03 18:25:36] 2025-06-03 22:25:21,142 | INFO     | ..............................
[2025-06-03 18:25:36] 2025-06-03 22:25:21,142 | INFO     | . Timing measurements:
[2025-06-03 18:25:36] 2025-06-03 22:25:21,142 | INFO     | . get job = 0 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,142 | INFO     | . initial setup = 2 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,142 | INFO     | . payload setup = 6 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,143 | INFO     | . stage-in = 0 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,143 | INFO     | . payload execution = 5288 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,143 | INFO     | . stage-out = 0 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,143 | INFO     | . log creation = 0 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,143 | INFO     | ..............................
[2025-06-03 18:25:36] 2025-06-03 22:25:21,262 | INFO     | 
[2025-06-03 18:25:36] 2025-06-03 22:25:21,262 | INFO     | job summary report
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | --------------------------------------------------
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | PanDA job id: 6677864264
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | task id: 45006595
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | errors: (none)
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | pilot state: finished 
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | transexitcode: 0
[2025-06-03 18:25:36] 2025-06-03 22:25:21,263 | INFO     | exeerrorcode: 0
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | exeerrordiag: 
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | exitcode: 0
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | exitmsg: OK
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | cpuconsumptiontime: 37365 s
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | nevents: 400
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | neventsw: 0
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | pid: 1155732
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | pgrp: 1155732
[2025-06-03 18:25:36] 2025-06-03 22:25:21,264 | INFO     | corecount: 8
[2025-06-03 18:25:36] 2025-06-03 22:25:21,265 | INFO     | event service: False
[2025-06-03 18:25:36] 2025-06-03 22:25:21,265 | INFO     | sizes: {0: 2404955, 1: 2405210, 5: 2405416, 12: 2405472, 5298: 2431904, 5299: 2440845, 5300: 2441029, 5305: 2441199}
[2025-06-03 18:25:36] 2025-06-03 22:25:21,265 | INFO     | --------------------------------------------------
[2025-06-03 18:25:36] 2025-06-03 22:25:21,265 | INFO     | 
[2025-06-03 18:25:36] 2025-06-03 22:25:21,265 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 18:25:36] 2025-06-03 22:25:21,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:25:36] 2025-06-03 22:25:21,294 | INFO     | job 6677864264 has completed (purged errors)
[2025-06-03 18:25:36] 2025-06-03 22:25:21,295 | INFO     | overall cleanup function is called
[2025-06-03 18:25:36] 2025-06-03 22:25:22,302 | INFO     | --- collectZombieJob: --- 10, [1155732]
[2025-06-03 18:25:36] 2025-06-03 22:25:22,302 | INFO     | zombie collector waiting for pid 1155732
[2025-06-03 18:25:36] 2025-06-03 22:25:22,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:25:36] 2025-06-03 22:25:22,302 | INFO     | collected zombie processes
[2025-06-03 18:25:36] 2025-06-03 22:25:22,302 | INFO     | will attempt to kill all subprocesses of pid=1155732
[2025-06-03 18:25:36] 2025-06-03 22:25:22,577 | INFO     | process IDs to be killed: [1155732] (in reverse order)
[2025-06-03 18:25:36] 2025-06-03 22:25:22,647 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:25:36] 2025-06-03 22:25:22,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:25:36] 2025-06-03 22:25:22,658 | INFO     | did not find any defunct processes belonging to 1155732
[2025-06-03 18:25:36] 2025-06-03 22:25:22,667 | INFO     | did not find any defunct processes belonging to 1155732
[2025-06-03 18:25:36] 2025-06-03 22:25:22,667 | INFO     | ready for new job
[2025-06-03 18:25:36] 2025-06-03 22:25:22,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:25:36] 2025-06-03 22:25:22,669 | INFO     | **************************************
[2025-06-03 18:25:36] 2025-06-03 22:25:22,670 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:25:36] 2025-06-03 22:25:22,670 | INFO     | **************************************
[2025-06-03 18:25:36] 2025-06-03 22:25:22,670 | INFO     | 
[2025-06-03 18:25:36] 2025-06-03 22:25:22,685 | INFO     | architecture information:
[2025-06-03 18:25:36] 2025-06-03 22:25:22,685 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:25:36] 2025-06-03 22:25:22,696 | INFO     | cat /etc/os-release:
[2025-06-03 18:25:36] NAME="CentOS Linux"
[2025-06-03 18:25:36] VERSION="7 (Core)"
[2025-06-03 18:25:36] ID="centos"
[2025-06-03 18:25:36] ID_LIKE="rhel fedora"
[2025-06-03 18:25:36] VERSION_ID="7"
[2025-06-03 18:25:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:25:36] ANSI_COLOR="0;31"
[2025-06-03 18:25:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:25:36] HOME_URL="https://www.centos.org/"
[2025-06-03 18:25:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:25:36] 
[2025-06-03 18:25:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:25:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:25:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:25:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:25:36] 
[2025-06-03 18:25:36] 2025-06-03 22:25:22,696 | INFO     | **************************************
[2025-06-03 18:25:36] 2025-06-03 22:25:23,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 18:25:36] 2025-06-03 22:25:23,213 | INFO     | sufficient remaining disk space (73602695168 B)
[2025-06-03 18:25:36] 2025-06-03 22:25:23,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:25:36] 2025-06-03 22:25:23,214 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:25:36] 2025-06-03 22:25:23,214 | INFO     | update_server=False
[2025-06-03 18:25:36] 2025-06-03 22:25:23,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:25:36] 2025-06-03 22:25:23,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:25:36] 2025-06-03 22:25:23,215 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:25:36] 2025-06-03 22:25:23,216 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:25:36] 2025-06-03 22:25:23,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:25:36] 2025-06-03 22:25:23,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:25:36] 2025-06-03 22:25:23,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:25:36] 2025-06-03 22:25:23,667 | INFO     | all job control threads have been joined
[2025-06-03 18:25:36] 2025-06-03 22:25:24,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:25:36] 2025-06-03 22:25:24,033 | INFO     | aborting loop
[2025-06-03 18:25:36] 2025-06-03 22:25:24,160 | INFO     | all data control threads have been joined
[2025-06-03 18:25:36] 2025-06-03 22:25:24,220 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:24,220 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:24,228 | INFO     | all payload control threads have been joined
[2025-06-03 18:25:36] 2025-06-03 22:25:24,484 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:24,672 | INFO     | [job] control thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:24,834 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,039 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,091 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,165 | INFO     | [data] control thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,209 | INFO     | [job] validate thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,233 | INFO     | [payload] control thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,274 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,393 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,418 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,504 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:25,519 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:26,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:25:36] 2025-06-03 22:25:30,667 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:25:36] 2025-06-03 22:25:31,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875579873088)>', '<ExcThread(monitor, started 139874862622464)>']
[2025-06-03 18:25:36] 2025-06-03 22:25:32,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:25:36] 2025-06-03 22:25:32,261 | INFO     | [monitor] control thread has ended
[2025-06-03 18:25:36] 2025-06-03 22:25:36,331 | INFO     | all workflow threads have been joined
[2025-06-03 18:25:36] 2025-06-03 22:25:36,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:25:36] 2025-06-03 22:25:36,332 | INFO     | traces error code: 0
[2025-06-03 18:25:36] 2025-06-03 22:25:36,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:25:36] 2025-06-03 22:25:36,487 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:25:36] 2025-06-03 22:25:36,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:25:36] 2025-06-03 22:25:36,492 [wrapper] pilotpid: 1149198
[2025-06-03 18:25:36] 2025-06-03 22:25:36,494 [wrapper] Pilot exit status: 0
[2025-06-03 18:25:36] 2025-06-03 22:25:36,503 [wrapper] pandaids: 6677864264
[2025-06-03 18:25:36] 2025-06-03 22:25:36,563 [wrapper] cleanup supervisor_pilot 1336779 1149199
[2025-06-03 18:25:36] 2025-06-03 22:25:36,566 [wrapper] Test setup, not cleaning
[2025-06-03 18:25:36] 2025-06-03 22:25:36,568 [wrapper] apfmon messages muted
[2025-06-03 18:25:36] 2025-06-03 22:25:36,571 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:25:36] 2025-06-03 22:25:36,573 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:25:36]  *** Error codes and diagnostics ***
[2025-06-03 18:25:36]     "exeErrorCode": 0,
[2025-06-03 18:25:36]     "exeErrorDiag": "",
[2025-06-03 18:25:36]     "pilotErrorCode": 0,
[2025-06-03 18:25:36]     "pilotErrorDiag": "",
[2025-06-03 18:25:36]  *** Listing of results directory ***
[2025-06-03 18:25:36] total 396976
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 13:52 queuedata.json
[2025-06-03 18:25:36] -rwx------. 1 boincer umatlas     37140 Jun  3 13:54 runpilot2-wrapper.sh
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas       100 Jun  3 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:25:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 16:56 run_atlas
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas       105 Jun  3 16:56 job.xml
[2025-06-03 18:25:36] -rw-r--r--. 2 boincer umatlas 216327088 Jun  3 16:56 EVNT.45006593._001645.pool.root.1
[2025-06-03 18:25:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 16:56 start_atlas.sh
[2025-06-03 18:25:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 16:56 shared
[2025-06-03 18:25:36] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 16:56 input.tar.gz
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas         0 Jun  3 16:56 boinc_lockfile
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 16:56 pandaJob.out
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas    986853 Jun  3 16:56 agis_schedconf.cvmfs.json
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas   1603667 Jun  3 16:56 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:25:36] drwx------. 4 boincer umatlas      4096 Jun  3 16:56 pilot3
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 18:19 init_data.xml
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas 184699695 Jun  3 18:24 HITS.45006595._041045.pool.root.1
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas       529 Jun  3 18:24 boinc_task_state.xml
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas      1034 Jun  3 18:25 memory_monitor_summary.json
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas    299649 Jun  3 18:25 log.45006595._041045.job.log.tgz.1
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas      7709 Jun  3 18:25 heartbeat.json
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas        95 Jun  3 18:25 pilot_heartbeat.json
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:25 boinc_mmap_file
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:25 wrapper_checkpoint.txt
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas      4476 Jun  3 18:25 pilotlog.txt
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas    516584 Jun  3 18:25 log.45006595._041045.job.log.1
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas       357 Jun  3 18:25 output.list
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:25 runtime_log
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas    839680 Jun  3 18:25 result.tar.gz
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas       649 Jun  3 18:25 vgHMDmP1kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZUlKDmhh8tVo.diag
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 18:25 runtime_log.err
[2025-06-03 18:25:36] -rw-r--r--. 1 boincer umatlas     21505 Jun  3 18:25 stderr.txt
[2025-06-03 18:25:36] HITS file was successfully produced:
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas 184699695 Jun  3 18:24 shared/HITS.pool.root.1
[2025-06-03 18:25:36]  *** Contents of shared directory: ***
[2025-06-03 18:25:36] total 392976
[2025-06-03 18:25:36] -rw-r--r--. 2 boincer umatlas 216327088 Jun  3 16:56 ATLAS.root_0
[2025-06-03 18:25:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 16:56 start_atlas.sh
[2025-06-03 18:25:36] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 16:56 input.tar.gz
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas 184699695 Jun  3 18:24 HITS.pool.root.1
[2025-06-03 18:25:36] -rw-------. 1 boincer umatlas    839680 Jun  3 18:25 result.tar.gz
18:25:37 (1145553): run_atlas exited; CPU time 37543.168301
18:25:37 (1145553): called boinc_finish(0)

</stderr_txt>
]]>

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