Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:41:15 (504455): wrapper (7.7.26015): starting
07:41:15 (504455): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 07:41:15] Arguments: --nthreads 3
[2025-06-04 07:41:15] Threads: 3
[2025-06-04 07:41:15] Checking for CVMFS
[2025-06-04 07:41:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:41:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:41:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:41:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:41:15] 2.9.2.0 9871 1473 79956 146769 0 56 24228735 36864000 0 130560 0 1333919 99.993 304560 9639 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 07:41:15] CVMFS is ok
[2025-06-04 07:41:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:41:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:41:15] Further information can be found at the LHC@home message board.
[2025-06-04 07:41:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:41:15] Checking for apptainer binary...
[2025-06-04 07:41:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:41:15] Running /usr/bin/apptainer --version
[2025-06-04 07:41:15] apptainer version 1.3.6-6.1
[2025-06-04 07:41:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:41:15] atlasA091
[2025-06-04 07:41:15] apptainer works
[2025-06-04 07:41:15] Set ATHENA_PROC_NUMBER=3
[2025-06-04 07:41:15] Set ATHENA_CORE_NUMBER=3
[2025-06-04 07:41:15] Starting ATLAS job with PandaID=6677977961
[2025-06-04 07:41:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:51:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:51:22]  status_code=0
[2025-06-04 08:51:22]  storage_token=
[2025-06-04 08:51:22]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677977961/log.45006595._043691.job.log.tgz.1
[2025-06-04 08:51:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/78/log.45006595._043691.job.log.tgz.1
[2025-06-04 08:51:22]  workdir=None
[2025-06-04 08:51:22] ]
[2025-06-04 08:51:22] 2025-06-04 06:50:57,276 | INFO     | transferring file log.45006595._043691.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677977961/log.45006595._043691.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 08:51:22] 2025-06-04 06:50:57,277 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677977961/log.45006595._043691.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0436
[2025-06-04 08:51:22] 2025-06-04 06:50:57,290 | INFO     | adding to output.list: log.45006595._043691.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/78/log.45006595._043691.job.log.tg
[2025-06-04 08:51:22] 2025-06-04 06:50:57,290 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:51:22] 2025-06-04 06:50:57,290 | INFO     | summary of transferred files:
[2025-06-04 08:51:22] 2025-06-04 06:50:57,290 | INFO     |  -- lfn=log.45006595._043691.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:51:22] 2025-06-04 06:50:57,290 | INFO     | stage-out finished correctly
[2025-06-04 08:51:22] 2025-06-04 06:50:57,499 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:51:22] 2025-06-04 06:50:58,305 | INFO     | PID=508104 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 08:51:22] 2025-06-04 06:51:00,469 | INFO     | job 6677977961 has state=finished
[2025-06-04 08:51:22] 2025-06-04 06:51:00,470 | INFO     | preparing for final server update for job 6677977961 in state='finished'
[2025-06-04 08:51:22] 2025-06-04 06:51:00,470 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:51:22] 2025-06-04 06:51:00,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:51:22] 2025-06-04 06:51:00,470 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:51:22] 2025-06-04 06:51:00,470 | INFO     | job 6677977961 has finished - writing final server update
[2025-06-04 08:51:22] 2025-06-04 06:51:00,470 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:51:22] 2025-06-04 06:51:00,472 | INFO     | executing command: lscpu
[2025-06-04 08:51:22] 2025-06-04 06:51:00,489 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:51:22] 2025-06-04 06:51:00,669 | WARNING  | process 514601 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:51:22] 2025-06-04 06:51:00,670 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677977961/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:51:22] 2025-06-04 06:51:00,670 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677977961/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:51:22] 2025-06-04 06:51:00,670 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2453518 B
[2025-06-04 08:51:22] 2025-06-04 06:51:00,670 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15795 B
[2025-06-04 08:51:22] 2025-06-04 06:51:00,670 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 08:51:22] 2025-06-04 06:51:02,916 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:51:22] 2025-06-04 06:51:02,919 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677977961/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,919 | INFO     | extracted standard info from prmon json
[2025-06-04 08:51:22] 2025-06-04 06:51:02,919 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:51:22] 2025-06-04 06:51:02,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:51:22] 2025-06-04 06:51:02,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:51:22] 2025-06-04 06:51:02,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:51:22] 2025-06-04 06:51:02,920 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | sum of deviations: -8374161099.5
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | mean x: 1749017866.5
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | mean y: 2458448.080645161
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | -- intersect: 198244179499.37585
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | intersect: 198244179499.37585
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | chi2: 0.06416927192269349
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | -- intersect: 198244179499.37585
[2025-06-04 08:51:22] 2025-06-04 06:51:02,921 | INFO     | current memory leak: -113.34 B/s (using 62 data points, chi2=0.06)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | ..............................
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . Timing measurements:
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . get job = 0 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . initial setup = 1 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . payload setup = 3 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . stage-in = 0 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . payload execution = 4155 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . stage-out = 0 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | . log creation = 0 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,922 | INFO     | ..............................
[2025-06-04 08:51:22] 2025-06-04 06:51:02,936 | INFO     | sufficient remaining disk space (376252137472 B)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,947 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | 
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | job summary report
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | --------------------------------------------------
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | PanDA job id: 6677977961
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | task id: 45006595
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | errors: (none)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,955 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | pilot state: finished 
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | transexitcode: 0
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | exeerrorcode: 0
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | exeerrordiag: 
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | exitcode: 0
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | exitmsg: OK
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | cpuconsumptiontime: 11815 s
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | nevents: 400
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | neventsw: 0
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | pid: 514601
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | pgrp: 514601
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | corecount: 3
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | event service: False
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | sizes: {0: 2404960, 1: 2405215, 3: 2405421, 11: 2405449, 4162: 2440321, 4163: 2440321, 4168: 2440619}
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | --------------------------------------------------
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | 
[2025-06-04 08:51:22] 2025-06-04 06:51:02,956 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 08:51:22] 2025-06-04 06:51:02,959 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6677977961: 2746974 B (within 2537553920 B limit)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,959 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6677977961/HITS.45006595._043691.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,959 | INFO     | total size of present files: 0 B (workdir size: 2746974 B)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,959 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6677977961/HITS.45006595._043691.pool.root.1 since it does not exist
[2025-06-04 08:51:22] 2025-06-04 06:51:02,968 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | job 6677977961 has completed (purged errors)
[2025-06-04 08:51:22] 2025-06-04 06:51:02,969 | INFO     | overall cleanup function is called
[2025-06-04 08:51:22] 2025-06-04 06:51:03,000 | INFO     | number of running child processes to parent process 514601: 1
[2025-06-04 08:51:22] 2025-06-04 06:51:03,000 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:51:22] 2025-06-04 06:51:03,001 | INFO     | aborting job monitoring since job object (job id=6677977961) has expired
[2025-06-04 08:51:22] 2025-06-04 06:51:03,976 | INFO     | --- collectZombieJob: --- 10, [514601]
[2025-06-04 08:51:22] 2025-06-04 06:51:03,976 | INFO     | zombie collector waiting for pid 514601
[2025-06-04 08:51:22] 2025-06-04 06:51:03,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:51:22] 2025-06-04 06:51:03,977 | INFO     | collected zombie processes
[2025-06-04 08:51:22] 2025-06-04 06:51:03,977 | INFO     | will attempt to kill all subprocesses of pid=514601
[2025-06-04 08:51:22] 2025-06-04 06:51:04,016 | INFO     | process IDs to be killed: [514601] (in reverse order)
[2025-06-04 08:51:22] 2025-06-04 06:51:04,041 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:51:22] 2025-06-04 06:51:04,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:51:22] 2025-06-04 06:51:04,042 | INFO     | did not find any defunct processes belonging to 514601
[2025-06-04 08:51:22] 2025-06-04 06:51:04,043 | INFO     | did not find any defunct processes belonging to 514601
[2025-06-04 08:51:22] 2025-06-04 06:51:04,043 | INFO     | ready for new job
[2025-06-04 08:51:22] 2025-06-04 06:51:04,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:51:22] 2025-06-04 06:51:04,044 | INFO     | **************************************
[2025-06-04 08:51:22] 2025-06-04 06:51:04,044 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:51:22] 2025-06-04 06:51:04,044 | INFO     | **************************************
[2025-06-04 08:51:22] 2025-06-04 06:51:04,044 | INFO     | 
[2025-06-04 08:51:22] 2025-06-04 06:51:04,044 | INFO     | architecture information:
[2025-06-04 08:51:22] 2025-06-04 06:51:04,044 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:51:22] 2025-06-04 06:51:04,053 | INFO     | cat /etc/os-release:
[2025-06-04 08:51:22] NAME="CentOS Linux"
[2025-06-04 08:51:22] VERSION="7 (Core)"
[2025-06-04 08:51:22] ID="centos"
[2025-06-04 08:51:22] ID_LIKE="rhel fedora"
[2025-06-04 08:51:22] VERSION_ID="7"
[2025-06-04 08:51:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:51:22] ANSI_COLOR="0;31"
[2025-06-04 08:51:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:51:22] HOME_URL="https://www.centos.org/"
[2025-06-04 08:51:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:51:22] 
[2025-06-04 08:51:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:51:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:51:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:51:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:51:22] 
[2025-06-04 08:51:22] 2025-06-04 06:51:04,053 | INFO     | **************************************
[2025-06-04 08:51:22] 2025-06-04 06:51:04,557 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | INFO     | sufficient remaining disk space (376255283200 B)
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | INFO     | update_server=False
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:51:22] 2025-06-04 06:51:04,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:51:22] 2025-06-04 06:51:04,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:51:22] 2025-06-04 06:51:04,571 | INFO     | aborting loop
[2025-06-04 08:51:22] 2025-06-04 06:51:04,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:51:22] 2025-06-04 06:51:05,063 | INFO     | all data control threads have been joined
[2025-06-04 08:51:22] 2025-06-04 06:51:05,165 | INFO     | all payload control threads have been joined
[2025-06-04 08:51:22] 2025-06-04 06:51:05,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:51:22] 2025-06-04 06:51:05,576 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:05,576 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:05,577 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:05,887 | INFO     | all job control threads have been joined
[2025-06-04 08:51:22] 2025-06-04 06:51:05,967 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,037 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,069 | INFO     | [data] control thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,170 | INFO     | [payload] control thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,606 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,610 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,821 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,892 | INFO     | [job] control thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,951 | INFO     | [job] validate thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:06,994 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:07,335 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:08,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:51:22] 2025-06-04 06:51:12,045 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:15,506 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:51:22] 2025-06-04 06:51:16,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:51:22] 2025-06-04 06:51:17,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237540157248)>', '<ExcThread(monitor, started 140236906551040)>']
[2025-06-04 08:51:22] 2025-06-04 06:51:18,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:51:22] 2025-06-04 06:51:18,646 | INFO     | [monitor] control thread has ended
[2025-06-04 08:51:22] 2025-06-04 06:51:22,754 | INFO     | all workflow threads have been joined
[2025-06-04 08:51:22] 2025-06-04 06:51:22,754 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:51:22] 2025-06-04 06:51:22,755 | INFO     | traces error code: 0
[2025-06-04 08:51:22] 2025-06-04 06:51:22,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:51:22] 2025-06-04 06:51:22,806 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:51:22] 2025-06-04 06:51:22,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:51:22] 2025-06-04 06:51:22,812 [wrapper] pilotpid: 508104
[2025-06-04 08:51:22] 2025-06-04 06:51:22,814 [wrapper] Pilot exit status: 0
[2025-06-04 08:51:22] 2025-06-04 06:51:22,821 [wrapper] pandaids: 6677977961
[2025-06-04 08:51:22] 2025-06-04 06:51:22,838 [wrapper] cleanup supervisor_pilot  524445 508105
[2025-06-04 08:51:22] 2025-06-04 06:51:22,840 [wrapper] Test setup, not cleaning
[2025-06-04 08:51:22] 2025-06-04 06:51:22,843 [wrapper] apfmon messages muted
[2025-06-04 08:51:22] 2025-06-04 06:51:22,846 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:51:22] 2025-06-04 06:51:22,848 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:51:22]  *** Error codes and diagnostics ***
[2025-06-04 08:51:22]     "exeErrorCode": 0,
[2025-06-04 08:51:22]     "exeErrorDiag": "",
[2025-06-04 08:51:22]     "pilotErrorCode": 0,
[2025-06-04 08:51:22]     "pilotErrorDiag": "",
[2025-06-04 08:51:22]  *** Listing of results directory ***
[2025-06-04 08:51:22] total 381660
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 08:51:22] -rwx------ 1 boinc boinc     37140 Jun  3 21:18 runpilot2-wrapper.sh
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:18 queuedata.json
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc       100 Jun  4 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:51:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 07:41 run_atlas
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc       105 Jun  4 07:41 job.xml
[2025-06-04 08:51:22] -rw-r--r-- 2 boinc boinc 215503079 Jun  4 07:41 EVNT.45006593._001751.pool.root.1
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc      6927 Jun  4 07:41 init_data.xml
[2025-06-04 08:51:22] drwxrwx--x 2 boinc boinc      4096 Jun  4 07:41 shared
[2025-06-04 08:51:22] -rw-r--r-- 2 boinc boinc    508881 Jun  4 07:41 input.tar.gz
[2025-06-04 08:51:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc         0 Jun  4 07:41 boinc_lockfile
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc      2525 Jun  4 07:41 pandaJob.out
[2025-06-04 08:51:22] -rw------- 1 boinc boinc    986745 Jun  4 07:41 agis_schedconf.cvmfs.json
[2025-06-04 08:51:22] -rw------- 1 boinc boinc   1603667 Jun  4 07:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:51:22] drwx------ 4 boinc boinc      4096 Jun  4 07:41 pilot3
[2025-06-04 08:51:22] -rw------- 1 boinc boinc 170180805 Jun  4 08:50 HITS.45006595._043691.pool.root.1
[2025-06-04 08:51:22] -rw------- 1 boinc boinc        95 Jun  4 08:50 pilot_heartbeat.json
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc       529 Jun  4 08:50 boinc_task_state.xml
[2025-06-04 08:51:22] -rw------- 1 boinc boinc      1018 Jun  4 08:50 memory_monitor_summary.json
[2025-06-04 08:51:22] -rw------- 1 boinc boinc    230807 Jun  4 08:50 log.45006595._043691.job.log.tgz.1
[2025-06-04 08:51:22] -rw------- 1 boinc boinc      7660 Jun  4 08:51 heartbeat.json
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:51 boinc_mmap_file
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc        27 Jun  4 08:51 wrapper_checkpoint.txt
[2025-06-04 08:51:22] -rw------- 1 boinc boinc      4552 Jun  4 08:51 pilotlog.txt
[2025-06-04 08:51:22] -rw------- 1 boinc boinc    414689 Jun  4 08:51 log.45006595._043691.job.log.1
[2025-06-04 08:51:22] -rw------- 1 boinc boinc       357 Jun  4 08:51 output.list
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:51 runtime_log
[2025-06-04 08:51:22] -rw------- 1 boinc boinc    665600 Jun  4 08:51 result.tar.gz
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc      8748 Jun  4 08:51 runtime_log.err
[2025-06-04 08:51:22] -rw------- 1 boinc boinc       661 Jun  4 08:51 Od5MDmwKmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKtlKDmCp0jZm.diag
[2025-06-04 08:51:22] -rw-r--r-- 1 boinc boinc     22392 Jun  4 08:51 stderr.txt
[2025-06-04 08:51:22] HITS file was successfully produced:
[2025-06-04 08:51:22] -rw------- 1 boinc boinc 170180805 Jun  4 08:50 shared/HITS.pool.root.1
[2025-06-04 08:51:22]  *** Contents of shared directory: ***
[2025-06-04 08:51:22] total 377828
[2025-06-04 08:51:22] -rw-r--r-- 2 boinc boinc 215503079 Jun  4 07:41 ATLAS.root_0
[2025-06-04 08:51:22] -rw-r--r-- 2 boinc boinc    508881 Jun  4 07:41 input.tar.gz
[2025-06-04 08:51:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 08:51:22] -rw------- 1 boinc boinc 170180805 Jun  4 08:50 HITS.pool.root.1
[2025-06-04 08:51:22] -rw------- 1 boinc boinc    665600 Jun  4 08:51 result.tar.gz
08:51:24 (504455): run_atlas exited; CPU time 11825.603900
08:51:24 (504455): called boinc_finish(0)

</stderr_txt>
]]>

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