Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:42:56 (1908122): wrapper (7.7.26015): starting
07:42:56 (1908122): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 07:42:56] Arguments: --nthreads 3
[2025-06-04 07:42:56] Threads: 3
[2025-06-04 07:42:56] Checking for CVMFS
[2025-06-04 07:42:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:42:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:42:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:42:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:42:57] 2.9.2.0 1307714 2039 67412 146769 0 56 28888424 36864000 0 130560 0 1610542 99.991 519086 31655 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 07:42:57] CVMFS is ok
[2025-06-04 07:42:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:42:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:42:57] Further information can be found at the LHC@home message board.
[2025-06-04 07:42:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:42:57] Checking for apptainer binary...
[2025-06-04 07:42:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:42:57] Running /usr/bin/apptainer --version
[2025-06-04 07:42:57] apptainer version 1.3.6-6.1
[2025-06-04 07:42:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:42:57] thA325a
[2025-06-04 07:42:57] apptainer works
[2025-06-04 07:42:57] Set ATHENA_PROC_NUMBER=3
[2025-06-04 07:42:57] Set ATHENA_CORE_NUMBER=3
[2025-06-04 07:42:57] Starting ATLAS job with PandaID=6677864113
[2025-06-04 07:42:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:05:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:05:52]  replicas=None
[2025-06-04 09:05:52]  scope=mc23_13p6TeV
[2025-06-04 09:05:52]  status=None
[2025-06-04 09:05:52]  status_code=0
[2025-06-04 09:05:52]  storage_token=
[2025-06-04 09:05:52]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677864113/log.45006595._040894.job.log.tgz.1
[2025-06-04 09:05:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/ae/log.45006595._040894.job.log.tgz.1
[2025-06-04 09:05:52]  workdir=None
[2025-06-04 09:05:52] ]
[2025-06-04 09:05:52] 2025-06-04 07:05:23,814 | INFO     | transferring file log.45006595._040894.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677864113/log.45006595._040894.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 09:05:52] 2025-06-04 07:05:23,814 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677864113/log.45006595._040894.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0408
[2025-06-04 09:05:52] 2025-06-04 07:05:23,827 | INFO     | adding to output.list: log.45006595._040894.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/ae/log.45006595._040894.job.log.tg
[2025-06-04 09:05:52] 2025-06-04 07:05:23,827 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:05:52] 2025-06-04 07:05:23,828 | INFO     | summary of transferred files:
[2025-06-04 09:05:52] 2025-06-04 07:05:23,828 | INFO     |  -- lfn=log.45006595._040894.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:05:52] 2025-06-04 07:05:23,828 | INFO     | stage-out finished correctly
[2025-06-04 09:05:52] 2025-06-04 07:05:24,468 | WARNING  | process 1918265 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:05:52] 2025-06-04 07:05:24,468 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677864113/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:52] 2025-06-04 07:05:24,502 | INFO     | number of running child processes to parent process 1918265: 1
[2025-06-04 09:05:52] 2025-06-04 07:05:24,502 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:05:52] 2025-06-04 07:05:26,489 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:05:52] 2025-06-04 07:05:27,011 | INFO     | monitor loop #381: job 0:6677864113 is in state 'finished'
[2025-06-04 09:05:52] 2025-06-04 07:05:27,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:52] 2025-06-04 07:05:29,502 | INFO     | job 6677864113 has state=finished
[2025-06-04 09:05:52] 2025-06-04 07:05:29,502 | INFO     | preparing for final server update for job 6677864113 in state='finished'
[2025-06-04 09:05:52] 2025-06-04 07:05:29,515 | INFO     | monitor loop #382: job 0:6677864113 is in state 'finished'
[2025-06-04 09:05:52] 2025-06-04 07:05:29,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:52] 2025-06-04 07:05:29,727 | INFO     | 4946s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 09:05:52] 2025-06-04 07:05:30,106 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:05:52] 2025-06-04 07:05:30,106 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:05:52] 2025-06-04 07:05:30,106 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:05:52] 2025-06-04 07:05:30,106 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:05:52] 2025-06-04 07:05:30,106 | INFO     | job 6677864113 has finished - writing final server update
[2025-06-04 09:05:52] 2025-06-04 07:05:30,107 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:05:52] 2025-06-04 07:05:30,107 | INFO     | executing command: lscpu
[2025-06-04 09:05:52] 2025-06-04 07:05:30,121 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:05:52] 2025-06-04 07:05:32,017 | INFO     | monitor loop #383: job 0:6677864113 is in state 'finished'
[2025-06-04 09:05:52] 2025-06-04 07:05:32,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:52] 2025-06-04 07:05:34,520 | INFO     | monitor loop #384: job 0:6677864113 is in state 'finished'
[2025-06-04 09:05:52] 2025-06-04 07:05:34,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:52] 2025-06-04 07:05:36,846 | INFO     | PID=1911771 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677864113/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | INFO     | extracted standard info from prmon json
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:05:52] 2025-06-04 07:05:36,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | sum of deviations: -10134821301.500002
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | mean x: 1749018341.5
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | mean y: 2428428.1486486485
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | -- intersect: 141098912598.50058
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | intersect: 141098912598.50058
[2025-06-04 09:05:52] 2025-06-04 07:05:36,957 | INFO     | chi2: 0.08557724395806945
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | -- intersect: 141098912598.50058
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | current memory leak: -80.67 B/s (using 74 data points, chi2=0.09)
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | ..............................
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . Timing measurements:
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . get job = 0 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . initial setup = 1 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . payload setup = 6 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . stage-in = 0 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . payload execution = 4912 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . stage-out = 0 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | . log creation = 0 s
[2025-06-04 09:05:52] 2025-06-04 07:05:36,958 | INFO     | ..............................
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | 
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | job summary report
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | --------------------------------------------------
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | PanDA job id: 6677864113
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | task id: 45006595
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | errors: (none)
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | pilot state: finished 
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | transexitcode: 0
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | exeerrorcode: 0
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | exeerrordiag: 
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | exitcode: 0
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | exitmsg: OK
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | cpuconsumptiontime: 14125 s
[2025-06-04 09:05:52] 2025-06-04 07:05:37,036 | INFO     | nevents: 400
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | neventsw: 0
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | pid: 1918265
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | pgrp: 1918265
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | corecount: 3
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | event service: False
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | sizes: {0: 2405185, 6: 2405391, 11: 2405419, 4922: 2431642, 4923: 2440589, 4926: 2440645, 4936: 2440943}
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | --------------------------------------------------
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | 
[2025-06-04 09:05:52] 2025-06-04 07:05:37,037 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 09:05:52] 2025-06-04 07:05:37,054 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | job 6677864113 has completed (purged errors)
[2025-06-04 09:05:52] 2025-06-04 07:05:37,056 | INFO     | overall cleanup function is called
[2025-06-04 09:05:52] 2025-06-04 07:05:38,064 | INFO     | --- collectZombieJob: --- 10, [1918265]
[2025-06-04 09:05:52] 2025-06-04 07:05:38,064 | INFO     | zombie collector waiting for pid 1918265
[2025-06-04 09:05:52] 2025-06-04 07:05:38,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:05:52] 2025-06-04 07:05:38,064 | INFO     | collected zombie processes
[2025-06-04 09:05:52] 2025-06-04 07:05:38,065 | INFO     | will attempt to kill all subprocesses of pid=1918265
[2025-06-04 09:05:52] 2025-06-04 07:05:38,104 | INFO     | process IDs to be killed: [1918265] (in reverse order)
[2025-06-04 09:05:52] 2025-06-04 07:05:38,130 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:05:52] 2025-06-04 07:05:38,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:05:52] 2025-06-04 07:05:38,132 | INFO     | did not find any defunct processes belonging to 1918265
[2025-06-04 09:05:52] 2025-06-04 07:05:38,132 | INFO     | did not find any defunct processes belonging to 1918265
[2025-06-04 09:05:52] 2025-06-04 07:05:38,133 | INFO     | ready for new job
[2025-06-04 09:05:52] 2025-06-04 07:05:38,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:05:52] 2025-06-04 07:05:38,133 | INFO     | **************************************
[2025-06-04 09:05:52] 2025-06-04 07:05:38,133 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:05:52] 2025-06-04 07:05:38,133 | INFO     | **************************************
[2025-06-04 09:05:52] 2025-06-04 07:05:38,133 | INFO     | 
[2025-06-04 09:05:52] 2025-06-04 07:05:38,134 | INFO     | architecture information:
[2025-06-04 09:05:52] 2025-06-04 07:05:38,134 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:05:52] 2025-06-04 07:05:38,143 | INFO     | cat /etc/os-release:
[2025-06-04 09:05:52] NAME="CentOS Linux"
[2025-06-04 09:05:52] VERSION="7 (Core)"
[2025-06-04 09:05:52] ID="centos"
[2025-06-04 09:05:52] ID_LIKE="rhel fedora"
[2025-06-04 09:05:52] VERSION_ID="7"
[2025-06-04 09:05:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:05:52] ANSI_COLOR="0;31"
[2025-06-04 09:05:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:05:52] HOME_URL="https://www.centos.org/"
[2025-06-04 09:05:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:05:52] 
[2025-06-04 09:05:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:05:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:05:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:05:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:05:52] 
[2025-06-04 09:05:52] 2025-06-04 07:05:38,144 | INFO     | **************************************
[2025-06-04 09:05:52] 2025-06-04 07:05:38,646 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 09:05:52] 2025-06-04 07:05:38,656 | INFO     | sufficient remaining disk space (828428517376 B)
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | INFO     | update_server=False
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:52] 2025-06-04 07:05:38,657 | INFO     | aborting loop
[2025-06-04 09:05:52] 2025-06-04 07:05:38,853 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:05:52] 2025-06-04 07:05:38,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:05:52] 2025-06-04 07:05:38,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:05:52] 2025-06-04 07:05:38,995 | INFO     | all job control threads have been joined
[2025-06-04 09:05:52] 2025-06-04 07:05:39,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:05:52] 2025-06-04 07:05:39,539 | INFO     | all data control threads have been joined
[2025-06-04 09:05:52] 2025-06-04 07:05:39,562 | INFO     | all payload control threads have been joined
[2025-06-04 09:05:52] 2025-06-04 07:05:39,662 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:39,663 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:39,664 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:39,720 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:39,888 | INFO     | [job] validate thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:39,893 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:40,001 | INFO     | [job] control thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:40,097 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:40,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:40,452 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:40,543 | INFO     | [data] control thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:40,568 | INFO     | [payload] control thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:41,090 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:41,237 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:41,388 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:41,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:05:52] 2025-06-04 07:05:45,545 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:05:52] 2025-06-04 07:05:47,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139892310771520)>', '<ExcThread(monitor, started 139891371403008)>']
[2025-06-04 09:05:52] 2025-06-04 07:05:47,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:05:52] 2025-06-04 07:05:47,892 | INFO     | [monitor] control thread has ended
[2025-06-04 09:05:52] 2025-06-04 07:05:52,519 | INFO     | all workflow threads have been joined
[2025-06-04 09:05:52] 2025-06-04 07:05:52,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:05:52] 2025-06-04 07:05:52,520 | INFO     | traces error code: 0
[2025-06-04 09:05:52] 2025-06-04 07:05:52,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:05:52] 2025-06-04 07:05:52,568 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:05:52] 2025-06-04 07:05:52,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:05:52] 2025-06-04 07:05:52,574 [wrapper] pilotpid: 1911771
[2025-06-04 09:05:52] 2025-06-04 07:05:52,577 [wrapper] Pilot exit status: 0
[2025-06-04 09:05:52] 2025-06-04 07:05:52,585 [wrapper] pandaids: 6677864113
[2025-06-04 09:05:52] 2025-06-04 07:05:52,600 [wrapper] cleanup supervisor_pilot 1930227 1911772
[2025-06-04 09:05:52] 2025-06-04 07:05:52,603 [wrapper] Test setup, not cleaning
[2025-06-04 09:05:52] 2025-06-04 07:05:52,606 [wrapper] apfmon messages muted
[2025-06-04 09:05:52] 2025-06-04 07:05:52,608 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:05:52] 2025-06-04 07:05:52,611 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:05:52]  *** Error codes and diagnostics ***
[2025-06-04 09:05:52]     "exeErrorCode": 0,
[2025-06-04 09:05:52]     "exeErrorDiag": "",
[2025-06-04 09:05:52]     "pilotErrorCode": 0,
[2025-06-04 09:05:52]     "pilotErrorDiag": "",
[2025-06-04 09:05:52]  *** Listing of results directory ***
[2025-06-04 09:05:52] total 384584
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 09:05:52] -rwx------ 1 boinc boinc     37140 Jun  3 19:48 runpilot2-wrapper.sh
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:48 queuedata.json
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc       100 Jun  4 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:05:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 07:42 run_atlas
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc       105 Jun  4 07:42 job.xml
[2025-06-04 09:05:52] -rw-r--r-- 2 boinc boinc 213546002 Jun  4 07:42 EVNT.45006593._001639.pool.root.1
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc      6680 Jun  4 07:42 init_data.xml
[2025-06-04 09:05:52] drwxrwx--x 2 boinc boinc      4096 Jun  4 07:42 shared
[2025-06-04 09:05:52] -rw-r--r-- 2 boinc boinc    508878 Jun  4 07:42 input.tar.gz
[2025-06-04 09:05:52] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:42 start_atlas.sh
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc         0 Jun  4 07:42 boinc_lockfile
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc      2524 Jun  4 07:42 pandaJob.out
[2025-06-04 09:05:52] -rw------- 1 boinc boinc    986745 Jun  4 07:43 agis_schedconf.cvmfs.json
[2025-06-04 09:05:52] -rw------- 1 boinc boinc   1603667 Jun  4 07:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:05:52] drwx------ 4 boinc boinc      4096 Jun  4 07:43 pilot3
[2025-06-04 09:05:52] -rw------- 1 boinc boinc 175035889 Jun  4 09:05 HITS.45006595._040894.pool.root.1
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc       529 Jun  4 09:05 boinc_task_state.xml
[2025-06-04 09:05:52] -rw------- 1 boinc boinc      1017 Jun  4 09:05 memory_monitor_summary.json
[2025-06-04 09:05:52] -rw------- 1 boinc boinc    216331 Jun  4 09:05 log.45006595._040894.job.log.tgz.1
[2025-06-04 09:05:52] -rw------- 1 boinc boinc        95 Jun  4 09:05 pilot_heartbeat.json
[2025-06-04 09:05:52] -rw------- 1 boinc boinc      7655 Jun  4 09:05 heartbeat.json
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc        27 Jun  4 09:05 wrapper_checkpoint.txt
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:05 boinc_mmap_file
[2025-06-04 09:05:52] -rw------- 1 boinc boinc      4357 Jun  4 09:05 pilotlog.txt
[2025-06-04 09:05:52] -rw------- 1 boinc boinc    480767 Jun  4 09:05 log.45006595._040894.job.log.1
[2025-06-04 09:05:52] -rw------- 1 boinc boinc       357 Jun  4 09:05 output.list
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc       620 Jun  4 09:05 runtime_log
[2025-06-04 09:05:52] -rw------- 1 boinc boinc    716800 Jun  4 09:05 result.tar.gz
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc      8738 Jun  4 09:05 runtime_log.err
[2025-06-04 09:05:52] -rw------- 1 boinc boinc       659 Jun  4 09:05 NjMLDmCvkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrSZKDmKz73im.diag
[2025-06-04 09:05:52] -rw-r--r-- 1 boinc boinc     21930 Jun  4 09:05 stderr.txt
[2025-06-04 09:05:52] HITS file was successfully produced:
[2025-06-04 09:05:52] -rw------- 1 boinc boinc 175035889 Jun  4 09:05 shared/HITS.pool.root.1
[2025-06-04 09:05:52]  *** Contents of shared directory: ***
[2025-06-04 09:05:52] total 380704
[2025-06-04 09:05:52] -rw-r--r-- 2 boinc boinc 213546002 Jun  4 07:42 ATLAS.root_0
[2025-06-04 09:05:52] -rw-r--r-- 2 boinc boinc    508878 Jun  4 07:42 input.tar.gz
[2025-06-04 09:05:52] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:42 start_atlas.sh
[2025-06-04 09:05:52] -rw------- 1 boinc boinc 175035889 Jun  4 09:05 HITS.pool.root.1
[2025-06-04 09:05:52] -rw------- 1 boinc boinc    716800 Jun  4 09:05 result.tar.gz
09:05:54 (1908122): run_atlas exited; CPU time 14149.490887
09:05:54 (1908122): called boinc_finish(0)

</stderr_txt>
]]>

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