Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:52:19 (3224008): wrapper (7.7.26015): starting
16:52:19 (3224008): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:52:19] Arguments: --nthreads 8
[2025-06-03 16:52:19] Threads: 8
[2025-06-03 16:52:19] Checking for CVMFS
[2025-06-03 16:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:52:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:52:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:52:19] 2.12.6.0 4995 36376 568264 146755 1 677 27436211 32935936 19472 16776704 1 461030047 99.682 376315591 12454 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 16:52:19] CVMFS is ok
[2025-06-03 16:52:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:52:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:52:19] Further information can be found at the LHC@home message board.
[2025-06-03 16:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:52:19] Checking for apptainer binary...
[2025-06-03 16:52:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:52:19] Running /usr/bin/apptainer --version
[2025-06-03 16:52:19] apptainer version 1.4.1-1.el9
[2025-06-03 16:52:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:52:19] c7-6-31.aglt2.org
[2025-06-03 16:52:19] apptainer works
[2025-06-03 16:52:19] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:52:19] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:52:19] Starting ATLAS job with PandaID=6665896944
[2025-06-03 16:52:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:55:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:55:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 17:55:59]  is_altstaged=None
[2025-06-03 17:55:59]  is_tar=False
[2025-06-03 17:55:59]  lfn=log.44871837._049406.job.log.tgz.1
[2025-06-03 17:55:59]  mtime=0
[2025-06-03 17:55:59]  protocol_id=None
[2025-06-03 17:55:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 17:55:59]  replicas=None
[2025-06-03 17:55:59]  scope=mc23_13p6TeV
[2025-06-03 17:55:59]  status=None
[2025-06-03 17:55:59]  status_code=0
[2025-06-03 17:55:59]  storage_token=
[2025-06-03 17:55:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665896944/log.44871837._049406.job.log.tgz.1
[2025-06-03 17:55:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/35/log.44871837._049406.job.log.tgz.1
[2025-06-03 17:55:59]  workdir=None
[2025-06-03 17:55:59] ]
[2025-06-03 17:55:59] 2025-06-03 21:55:32,155 | INFO     | transferring file log.44871837._049406.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665896944/log.44871837._049406.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 17:55:59] 2025-06-03 21:55:32,155 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665896944/log.44871837._049406.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._049406.job
[2025-06-03 17:55:59] 2025-06-03 21:55:32,181 | INFO     | adding to output.list: log.44871837._049406.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/35/log.44871837._049406.job.log.tg
[2025-06-03 17:55:59] 2025-06-03 21:55:32,181 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 17:55:59] 2025-06-03 21:55:32,181 | INFO     | summary of transferred files:
[2025-06-03 17:55:59] 2025-06-03 21:55:32,182 | INFO     |  -- lfn=log.44871837._049406.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 17:55:59] 2025-06-03 21:55:32,182 | INFO     | stage-out finished correctly
[2025-06-03 17:55:59] 2025-06-03 21:55:33,720 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 17:55:59] 2025-06-03 21:55:34,295 | INFO     | monitor loop #277: job 0:6665896944 is in state 'finished'
[2025-06-03 17:55:59] 2025-06-03 21:55:34,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:55:59] 2025-06-03 21:55:36,549 | INFO     | job 6665896944 has state=finished
[2025-06-03 17:55:59] 2025-06-03 21:55:36,550 | INFO     | preparing for final server update for job 6665896944 in state='finished'
[2025-06-03 17:55:59] 2025-06-03 21:55:36,550 | INFO     | this job has now completed (state=finished)
[2025-06-03 17:55:59] 2025-06-03 21:55:36,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 17:55:59] 2025-06-03 21:55:36,551 | INFO     | log transfer has been attempted: DONE
[2025-06-03 17:55:59] 2025-06-03 21:55:36,551 | INFO     | job 6665896944 has finished - writing final server update
[2025-06-03 17:55:59] 2025-06-03 21:55:36,551 | INFO     | total number of processed events: 400 (read)
[2025-06-03 17:55:59] 2025-06-03 21:55:36,569 | INFO     | executing command: lscpu
[2025-06-03 17:55:59] 2025-06-03 21:55:36,666 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:55:59] 2025-06-03 21:55:36,799 | INFO     | monitor loop #278: job 0:6665896944 is in state 'finished'
[2025-06-03 17:55:59] 2025-06-03 21:55:36,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:55:59] 2025-06-03 21:55:39,301 | INFO     | monitor loop #279: job 0:6665896944 is in state 'finished'
[2025-06-03 17:55:59] 2025-06-03 21:55:39,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:55:59] 2025-06-03 21:55:40,655 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:55:59] 2025-06-03 21:55:40,655 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665896944/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:55:59] 2025-06-03 21:55:40,656 | INFO     | extracted standard info from prmon json
[2025-06-03 17:55:59] 2025-06-03 21:55:40,656 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:55:59] 2025-06-03 21:55:40,656 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:55:59] 2025-06-03 21:55:40,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:55:59] 2025-06-03 21:55:40,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:55:59] 2025-06-03 21:55:40,658 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:55:59] 2025-06-03 21:55:40,658 | INFO     | sum of square deviations: 51573060.0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,658 | INFO     | sum of deviations: -1610773320.0000002
[2025-06-03 17:55:59] 2025-06-03 21:55:40,658 | INFO     | mean x: 1748985925.0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | mean y: 2229233.090909091
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | -- intersect: 54628033190.535385
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | intersect: 54628033190.535385
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | chi2: 0.018013607205392815
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | -- intersect: 54628033190.535385
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | current memory leak: -31.23 B/s (using 55 data points, chi2=0.02)
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | ..............................
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | . Timing measurements:
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | . get job = 0 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,660 | INFO     | . initial setup = 2 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,661 | INFO     | . payload setup = 5 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,661 | INFO     | . stage-in = 0 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,661 | INFO     | . payload execution = 3757 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,661 | INFO     | . stage-out = 0 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,661 | INFO     | . log creation = 0 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,661 | INFO     | ..............................
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | 
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | job summary report
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | --------------------------------------------------
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | PanDA job id: 6665896944
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | task id: 44871837
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | errors: (none)
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | pilot state: finished 
[2025-06-03 17:55:59] 2025-06-03 21:55:40,729 | INFO     | transexitcode: 0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | exeerrorcode: 0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | exeerrordiag: 
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | exitcode: 0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | exitmsg: OK
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | cpuconsumptiontime: 27189 s
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | nevents: 400
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | neventsw: 0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | pid: 3244920
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | pgrp: 3244920
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | corecount: 8
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | event service: False
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 3766: 2431139, 3767: 2431138, 3768: 2440135, 3770: 2440319, 3777: 2440489}
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | --------------------------------------------------
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | 
[2025-06-03 17:55:59] 2025-06-03 21:55:40,730 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 17:55:59] 2025-06-03 21:55:40,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | job 6665896944 has completed (purged errors)
[2025-06-03 17:55:59] 2025-06-03 21:55:40,753 | INFO     | overall cleanup function is called
[2025-06-03 17:55:59] 2025-06-03 21:55:41,761 | INFO     | --- collectZombieJob: --- 10, [3244920]
[2025-06-03 17:55:59] 2025-06-03 21:55:41,761 | INFO     | zombie collector waiting for pid 3244920
[2025-06-03 17:55:59] 2025-06-03 21:55:41,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:55:59] 2025-06-03 21:55:41,762 | INFO     | collected zombie processes
[2025-06-03 17:55:59] 2025-06-03 21:55:41,762 | INFO     | will attempt to kill all subprocesses of pid=3244920
[2025-06-03 17:55:59] 2025-06-03 21:55:42,126 | INFO     | process IDs to be killed: [3244920] (in reverse order)
[2025-06-03 17:55:59] 2025-06-03 21:55:42,270 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:55:59] 2025-06-03 21:55:42,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:55:59] 2025-06-03 21:55:42,289 | INFO     | did not find any defunct processes belonging to 3244920
[2025-06-03 17:55:59] 2025-06-03 21:55:42,307 | INFO     | did not find any defunct processes belonging to 3244920
[2025-06-03 17:55:59] 2025-06-03 21:55:42,307 | INFO     | ready for new job
[2025-06-03 17:55:59] 2025-06-03 21:55:42,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:55:59] 2025-06-03 21:55:42,309 | INFO     | **************************************
[2025-06-03 17:55:59] 2025-06-03 21:55:42,310 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:55:59] 2025-06-03 21:55:42,310 | INFO     | **************************************
[2025-06-03 17:55:59] 2025-06-03 21:55:42,310 | INFO     | 
[2025-06-03 17:55:59] 2025-06-03 21:55:42,326 | INFO     | architecture information:
[2025-06-03 17:55:59] 2025-06-03 21:55:42,326 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:55:59] 2025-06-03 21:55:42,342 | INFO     | cat /etc/os-release:
[2025-06-03 17:55:59] NAME="CentOS Linux"
[2025-06-03 17:55:59] VERSION="7 (Core)"
[2025-06-03 17:55:59] ID="centos"
[2025-06-03 17:55:59] ID_LIKE="rhel fedora"
[2025-06-03 17:55:59] VERSION_ID="7"
[2025-06-03 17:55:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:55:59] ANSI_COLOR="0;31"
[2025-06-03 17:55:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:55:59] HOME_URL="https://www.centos.org/"
[2025-06-03 17:55:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:55:59] 
[2025-06-03 17:55:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:55:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:55:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:55:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:55:59] 
[2025-06-03 17:55:59] 2025-06-03 21:55:42,342 | INFO     | **************************************
[2025-06-03 17:55:59] 2025-06-03 21:55:42,845 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 17:55:59] 2025-06-03 21:55:42,862 | INFO     | sufficient remaining disk space (75678875648 B)
[2025-06-03 17:55:59] 2025-06-03 21:55:42,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:55:59] 2025-06-03 21:55:42,862 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:55:59] 2025-06-03 21:55:42,862 | INFO     | update_server=False
[2025-06-03 17:55:59] 2025-06-03 21:55:42,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:55:59] 2025-06-03 21:55:42,862 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:55:59] 2025-06-03 21:55:42,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:55:59] 2025-06-03 21:55:42,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:55:59] 2025-06-03 21:55:42,864 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:55:59] 2025-06-03 21:55:42,865 | INFO     | aborting loop
[2025-06-03 17:55:59] 2025-06-03 21:55:42,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:55:59] 2025-06-03 21:55:42,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:55:59] 2025-06-03 21:55:43,708 | INFO     | all data control threads have been joined
[2025-06-03 17:55:59] 2025-06-03 21:55:43,866 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:43,870 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:43,904 | INFO     | all payload control threads have been joined
[2025-06-03 17:55:59] 2025-06-03 21:55:43,908 | INFO     | all job control threads have been joined
[2025-06-03 17:55:59] 2025-06-03 21:55:43,970 | INFO     | [job] validate thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,103 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,114 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,243 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:55:59] 2025-06-03 21:55:44,604 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,713 | INFO     | [data] control thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,812 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,870 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,906 | INFO     | [payload] control thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:44,913 | INFO     | [job] control thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:45,082 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:45,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:55:59] 2025-06-03 21:55:46,744 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:48,305 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:52,930 | INFO     | job.realtimelogging is not enabled
[2025-06-03 17:55:59] 2025-06-03 21:55:53,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:55:59] 2025-06-03 21:55:54,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253097625408)>', '<ExcThread(monitor, started 140252601632512)>']
[2025-06-03 17:55:59] 2025-06-03 21:55:54,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:55:59] 2025-06-03 21:55:54,925 | INFO     | [monitor] control thread has ended
[2025-06-03 17:55:59] 2025-06-03 21:55:59,309 | INFO     | all workflow threads have been joined
[2025-06-03 17:55:59] 2025-06-03 21:55:59,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:55:59] 2025-06-03 21:55:59,311 | INFO     | traces error code: 0
[2025-06-03 17:55:59] 2025-06-03 21:55:59,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:55:59] 2025-06-03 21:55:59,463 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:55:59] 2025-06-03 21:55:59,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:55:59] 2025-06-03 21:55:59,468 [wrapper] pilotpid: 3230440
[2025-06-03 17:55:59] 2025-06-03 21:55:59,471 [wrapper] Pilot exit status: 0
[2025-06-03 17:55:59] 2025-06-03 21:55:59,482 [wrapper] pandaids: 6665896944
[2025-06-03 17:55:59] 2025-06-03 21:55:59,564 [wrapper] cleanup supervisor_pilot 3721711 3230441
[2025-06-03 17:55:59] 2025-06-03 21:55:59,567 [wrapper] Test setup, not cleaning
[2025-06-03 17:55:59] 2025-06-03 21:55:59,569 [wrapper] apfmon messages muted
[2025-06-03 17:55:59] 2025-06-03 21:55:59,572 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:55:59] 2025-06-03 21:55:59,574 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:55:59]  *** Error codes and diagnostics ***
[2025-06-03 17:55:59]     "exeErrorCode": 0,
[2025-06-03 17:55:59]     "exeErrorDiag": "",
[2025-06-03 17:55:59]     "pilotErrorCode": 0,
[2025-06-03 17:55:59]     "pilotErrorDiag": "",
[2025-06-03 17:55:59]  *** Listing of results directory ***
[2025-06-03 17:55:59] total 407924
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas    495897 May 26 06:58 pilot3.tar.gz
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas      5111 May 26 07:08 queuedata.json
[2025-06-03 17:55:59] -rwx------. 1 boincer umatlas     37140 May 26 07:09 runpilot2-wrapper.sh
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas       100 Jun  3 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:55:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 16:52 run_atlas
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas       105 Jun  3 16:52 job.xml
[2025-06-03 17:55:59] -rw-r--r--. 2 boincer umatlas 223372627 Jun  3 16:52 EVNT.44871834._001969.pool.root.1
[2025-06-03 17:55:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 16:52 start_atlas.sh
[2025-06-03 17:55:59] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 16:52 shared
[2025-06-03 17:55:59] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 16:52 input.tar.gz
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas         0 Jun  3 16:52 boinc_lockfile
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 16:52 pandaJob.out
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas    986853 Jun  3 16:52 agis_schedconf.cvmfs.json
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas   1603667 Jun  3 16:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:55:59] drwx------. 4 boincer umatlas      4096 Jun  3 16:52 pilot3
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas      6932 Jun  3 17:48 init_data.xml
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas        95 Jun  3 17:54 pilot_heartbeat.json
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas       530 Jun  3 17:55 boinc_task_state.xml
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas 189128905 Jun  3 17:55 HITS.44871837._049406.pool.root.1
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas      1042 Jun  3 17:55 memory_monitor_summary.json
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas    304838 Jun  3 17:55 log.44871837._049406.job.log.tgz.1
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas      7688 Jun  3 17:55 heartbeat.json
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:55 boinc_mmap_file
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas      4548 Jun  3 17:55 pilotlog.txt
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:55 wrapper_checkpoint.txt
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas    383168 Jun  3 17:55 log.44871837._049406.job.log.1
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas       357 Jun  3 17:55 output.list
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:55 runtime_log
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas    706560 Jun  3 17:55 result.tar.gz
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 17:55 runtime_log.err
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas       651 Jun  3 17:55 CbLKDmlskd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhXWKDmwFA1Fo.diag
[2025-06-03 17:55:59] -rw-r--r--. 1 boincer umatlas     21382 Jun  3 17:55 stderr.txt
[2025-06-03 17:55:59] HITS file was successfully produced:
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas 189128905 Jun  3 17:55 shared/HITS.pool.root.1
[2025-06-03 17:55:59]  *** Contents of shared directory: ***
[2025-06-03 17:55:59] total 404052
[2025-06-03 17:55:59] -rw-r--r--. 2 boincer umatlas 223372627 Jun  3 16:52 ATLAS.root_0
[2025-06-03 17:55:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 16:52 start_atlas.sh
[2025-06-03 17:55:59] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 16:52 input.tar.gz
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas 189128905 Jun  3 17:55 HITS.pool.root.1
[2025-06-03 17:55:59] -rw-------. 1 boincer umatlas    706560 Jun  3 17:55 result.tar.gz
17:56:01 (3224008): run_atlas exited; CPU time 27307.379086
17:56:01 (3224008): called boinc_finish(0)

</stderr_txt>
]]>

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