Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:21 (1065241): wrapper (7.7.26015): starting
16:54:21 (1065241): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:54:21] Arguments: --nthreads 8
[2025-06-03 16:54:21] Threads: 8
[2025-06-03 16:54:21] Checking for CVMFS
[2025-06-03 16:54:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:54:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:54:21] 2.12.6.0 4820 404 72624 146755 0 56 18521427 32935937 3664 16776704 0 1653353 99.998 83301 43750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 16:54:21] CVMFS is ok
[2025-06-03 16:54:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:54:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:54:21] Further information can be found at the LHC@home message board.
[2025-06-03 16:54:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:54:21] Checking for apptainer binary...
[2025-06-03 16:54:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:54:21] Running /usr/bin/apptainer --version
[2025-06-03 16:54:21] apptainer version 1.4.1-1.el9
[2025-06-03 16:54:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:54:22] c-8-32.aglt2.org
[2025-06-03 16:54:22] apptainer works
[2025-06-03 16:54:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:54:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:54:22] Starting ATLAS job with PandaID=6677863852
[2025-06-03 16:54:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:16:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:16:56]  filetype=log
[2025-06-03 18:16:56]  guid=605ab9da-3710-4462-ae20-8c8c4d6953fa
[2025-06-03 18:16:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 18:16:56]  is_altstaged=None
[2025-06-03 18:16:56]  is_tar=False
[2025-06-03 18:16:56]  lfn=log.45006595._040679.job.log.tgz.1
[2025-06-03 18:16:56]  mtime=0
[2025-06-03 18:16:56]  protocol_id=None
[2025-06-03 18:16:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:16:56]  replicas=None
[2025-06-03 18:16:56]  scope=mc23_13p6TeV
[2025-06-03 18:16:56]  status=None
[2025-06-03 18:16:56]  status_code=0
[2025-06-03 18:16:56]  storage_token=
[2025-06-03 18:16:56]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677863852/log.45006595._040679.job.log.tgz.1
[2025-06-03 18:16:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/d6/log.45006595._040679.job.log.tgz.1
[2025-06-03 18:16:56]  workdir=None
[2025-06-03 18:16:56] ]
[2025-06-03 18:16:56] 2025-06-03 22:16:32,711 | INFO     | transferring file log.45006595._040679.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677863852/log.45006595._040679.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:16:56] 2025-06-03 22:16:32,711 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677863852/log.45006595._040679.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._040679.job
[2025-06-03 18:16:56] 2025-06-03 22:16:32,727 | INFO     | adding to output.list: log.45006595._040679.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/d6/log.45006595._040679.job.log.tg
[2025-06-03 18:16:56] 2025-06-03 22:16:32,728 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:16:56] 2025-06-03 22:16:32,728 | INFO     | summary of transferred files:
[2025-06-03 18:16:56] 2025-06-03 22:16:32,728 | INFO     |  -- lfn=log.45006595._040679.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:16:56] 2025-06-03 22:16:32,728 | INFO     | stage-out finished correctly
[2025-06-03 18:16:56] 2025-06-03 22:16:32,843 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:16:56] 2025-06-03 22:16:34,486 | INFO     | job 6677863852 has state=finished
[2025-06-03 18:16:56] 2025-06-03 22:16:34,486 | INFO     | preparing for final server update for job 6677863852 in state='finished'
[2025-06-03 18:16:56] 2025-06-03 22:16:34,487 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:16:56] 2025-06-03 22:16:34,487 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:16:56] 2025-06-03 22:16:34,487 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:16:56] 2025-06-03 22:16:34,488 | INFO     | job 6677863852 has finished - writing final server update
[2025-06-03 18:16:56] 2025-06-03 22:16:34,488 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:16:56] 2025-06-03 22:16:34,503 | INFO     | executing command: lscpu
[2025-06-03 18:16:56] 2025-06-03 22:16:34,557 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:16:56] 2025-06-03 22:16:36,713 | WARNING  | process 1075338 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 18:16:56] 2025-06-03 22:16:36,713 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677863852/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:16:56] 2025-06-03 22:16:36,962 | INFO     | number of running child processes to parent process 1075338: 1
[2025-06-03 18:16:56] 2025-06-03 22:16:36,962 | INFO     | maximum number of monitored processes: 6
[2025-06-03 18:16:56] 2025-06-03 22:16:38,051 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:16:56] 2025-06-03 22:16:38,052 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677863852/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:16:56] 2025-06-03 22:16:38,052 | INFO     | extracted standard info from prmon json
[2025-06-03 18:16:56] 2025-06-03 22:16:38,053 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:16:56] 2025-06-03 22:16:38,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:16:56] 2025-06-03 22:16:38,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:16:56] 2025-06-03 22:16:38,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:16:56] 2025-06-03 22:16:38,055 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:16:56] 2025-06-03 22:16:38,056 | INFO     | sum of square deviations: 125630262.5
[2025-06-03 18:16:56] 2025-06-03 22:16:38,056 | INFO     | sum of deviations: -4277383257.0000005
[2025-06-03 18:16:56] 2025-06-03 22:16:38,056 | INFO     | mean x: 1748986627.5
[2025-06-03 18:16:56] 2025-06-03 22:16:38,057 | INFO     | mean y: 2170658.6756756757
[2025-06-03 18:16:56] 2025-06-03 22:16:38,057 | INFO     | -- intersect: 59550610408.09828
[2025-06-03 18:16:56] 2025-06-03 22:16:38,057 | INFO     | intersect: 59550610408.09828
[2025-06-03 18:16:56] 2025-06-03 22:16:38,057 | INFO     | chi2: 0.07007529083301277
[2025-06-03 18:16:56] 2025-06-03 22:16:38,057 | INFO     | -- intersect: 59550610408.09828
[2025-06-03 18:16:56] 2025-06-03 22:16:38,057 | INFO     | current memory leak: -34.05 B/s (using 74 data points, chi2=0.07)
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | ..............................
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | . Timing measurements:
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | . get job = 0 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | . initial setup = 3 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | . payload setup = 5 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | . stage-in = 0 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,058 | INFO     | . payload execution = 4895 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,059 | INFO     | . stage-out = 0 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,059 | INFO     | . log creation = 0 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,059 | INFO     | ..............................
[2025-06-03 18:16:56] 2025-06-03 22:16:38,167 | INFO     | 
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | job summary report
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | --------------------------------------------------
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | PanDA job id: 6677863852
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | task id: 45006595
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | errors: (none)
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:16:56] 2025-06-03 22:16:38,168 | INFO     | pilot state: finished 
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | transexitcode: 0
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | exeerrorcode: 0
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | exeerrordiag: 
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | exitcode: 0
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | exitmsg: OK
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | cpuconsumptiontime: 36384 s
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | nevents: 400
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | neventsw: 0
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | pid: 1075338
[2025-06-03 18:16:56] 2025-06-03 22:16:38,169 | INFO     | pgrp: 1075338
[2025-06-03 18:16:56] 2025-06-03 22:16:38,170 | INFO     | corecount: 8
[2025-06-03 18:16:56] 2025-06-03 22:16:38,170 | INFO     | event service: False
[2025-06-03 18:16:56] 2025-06-03 22:16:38,170 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4904: 2431588, 4905: 2431587, 4906: 2440768, 4911: 2440882}
[2025-06-03 18:16:56] 2025-06-03 22:16:38,170 | INFO     | --------------------------------------------------
[2025-06-03 18:16:56] 2025-06-03 22:16:38,170 | INFO     | 
[2025-06-03 18:16:56] 2025-06-03 22:16:38,170 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 18:16:56] 2025-06-03 22:16:38,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:16:56] 2025-06-03 22:16:38,190 | INFO     | job 6677863852 has completed (purged errors)
[2025-06-03 18:16:56] 2025-06-03 22:16:38,190 | INFO     | overall cleanup function is called
[2025-06-03 18:16:56] 2025-06-03 22:16:39,197 | INFO     | --- collectZombieJob: --- 10, [1075338]
[2025-06-03 18:16:56] 2025-06-03 22:16:39,197 | INFO     | zombie collector waiting for pid 1075338
[2025-06-03 18:16:56] 2025-06-03 22:16:39,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:16:56] 2025-06-03 22:16:39,198 | INFO     | collected zombie processes
[2025-06-03 18:16:56] 2025-06-03 22:16:39,198 | INFO     | will attempt to kill all subprocesses of pid=1075338
[2025-06-03 18:16:56] 2025-06-03 22:16:39,441 | INFO     | process IDs to be killed: [1075338] (in reverse order)
[2025-06-03 18:16:56] 2025-06-03 22:16:39,505 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:16:56] 2025-06-03 22:16:39,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:16:56] 2025-06-03 22:16:39,513 | INFO     | did not find any defunct processes belonging to 1075338
[2025-06-03 18:16:56] 2025-06-03 22:16:39,519 | INFO     | did not find any defunct processes belonging to 1075338
[2025-06-03 18:16:56] 2025-06-03 22:16:39,519 | INFO     | ready for new job
[2025-06-03 18:16:56] 2025-06-03 22:16:39,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:16:56] 2025-06-03 22:16:39,521 | INFO     | **************************************
[2025-06-03 18:16:56] 2025-06-03 22:16:39,521 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:16:56] 2025-06-03 22:16:39,521 | INFO     | **************************************
[2025-06-03 18:16:56] 2025-06-03 22:16:39,521 | INFO     | 
[2025-06-03 18:16:56] 2025-06-03 22:16:39,535 | INFO     | architecture information:
[2025-06-03 18:16:56] 2025-06-03 22:16:39,536 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:16:56] 2025-06-03 22:16:39,548 | INFO     | cat /etc/os-release:
[2025-06-03 18:16:56] NAME="CentOS Linux"
[2025-06-03 18:16:56] VERSION="7 (Core)"
[2025-06-03 18:16:56] ID="centos"
[2025-06-03 18:16:56] ID_LIKE="rhel fedora"
[2025-06-03 18:16:56] VERSION_ID="7"
[2025-06-03 18:16:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:16:56] ANSI_COLOR="0;31"
[2025-06-03 18:16:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:16:56] HOME_URL="https://www.centos.org/"
[2025-06-03 18:16:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:16:56] 
[2025-06-03 18:16:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:16:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:16:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:16:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:16:56] 
[2025-06-03 18:16:56] 2025-06-03 22:16:39,548 | INFO     | **************************************
[2025-06-03 18:16:56] 2025-06-03 22:16:40,051 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 18:16:56] 2025-06-03 22:16:40,065 | INFO     | sufficient remaining disk space (74301046784 B)
[2025-06-03 18:16:56] 2025-06-03 22:16:40,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:16:56] 2025-06-03 22:16:40,066 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:16:56] 2025-06-03 22:16:40,066 | INFO     | update_server=False
[2025-06-03 18:16:56] 2025-06-03 22:16:40,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:16:56] 2025-06-03 22:16:40,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:16:56] 2025-06-03 22:16:40,067 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:16:56] 2025-06-03 22:16:40,067 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:16:56] 2025-06-03 22:16:40,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:16:56] 2025-06-03 22:16:40,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:16:56] 2025-06-03 22:16:40,325 | INFO     | all payload control threads have been joined
[2025-06-03 18:16:56] 2025-06-03 22:16:40,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:16:56] 2025-06-03 22:16:40,470 | INFO     | aborting loop
[2025-06-03 18:16:56] 2025-06-03 22:16:40,567 | INFO     | all data control threads have been joined
[2025-06-03 18:16:56] 2025-06-03 22:16:40,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:16:56] 2025-06-03 22:16:41,029 | INFO     | all job control threads have been joined
[2025-06-03 18:16:56] 2025-06-03 22:16:41,069 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,072 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,200 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,317 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,330 | INFO     | [payload] control thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,476 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,568 | INFO     | [data] control thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,598 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,742 | INFO     | [job] validate thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,866 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:41,932 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:42,035 | INFO     | [job] control thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:42,536 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:42,859 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:43,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:16:56] 2025-06-03 22:16:47,463 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:50,295 | INFO     | job.realtimelogging is not enabled
[2025-06-03 18:16:56] 2025-06-03 22:16:51,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:16:56] 2025-06-03 22:16:51,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627427526464)>', '<ExcThread(monitor, started 139626937300736)>']
[2025-06-03 18:16:56] 2025-06-03 22:16:52,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:16:56] 2025-06-03 22:16:52,127 | INFO     | [monitor] control thread has ended
[2025-06-03 18:16:56] 2025-06-03 22:16:56,409 | INFO     | all workflow threads have been joined
[2025-06-03 18:16:56] 2025-06-03 22:16:56,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:16:56] 2025-06-03 22:16:56,410 | INFO     | traces error code: 0
[2025-06-03 18:16:56] 2025-06-03 22:16:56,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:16:56] 2025-06-03 22:16:56,521 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:16:56] 2025-06-03 22:16:56,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:16:56] 2025-06-03 22:16:56,526 [wrapper] pilotpid: 1068873
[2025-06-03 18:16:56] 2025-06-03 22:16:56,529 [wrapper] Pilot exit status: 0
[2025-06-03 18:16:56] 2025-06-03 22:16:56,538 [wrapper] pandaids: 6677863852
[2025-06-03 18:16:56] 2025-06-03 22:16:56,581 [wrapper] cleanup supervisor_pilot 1258015 1068874
[2025-06-03 18:16:56] 2025-06-03 22:16:56,584 [wrapper] Test setup, not cleaning
[2025-06-03 18:16:56] 2025-06-03 22:16:56,586 [wrapper] apfmon messages muted
[2025-06-03 18:16:56] 2025-06-03 22:16:56,589 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:16:56] 2025-06-03 22:16:56,591 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:16:56]  *** Error codes and diagnostics ***
[2025-06-03 18:16:56]     "exeErrorCode": 0,
[2025-06-03 18:16:56]     "exeErrorDiag": "",
[2025-06-03 18:16:56]     "pilotErrorCode": 0,
[2025-06-03 18:16:56]     "pilotErrorDiag": "",
[2025-06-03 18:16:56]  *** Listing of results directory ***
[2025-06-03 18:16:56] total 387628
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 13:31 queuedata.json
[2025-06-03 18:16:56] -rwx------. 1 boincer umatlas     37140 Jun  3 13:32 runpilot2-wrapper.sh
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas       100 Jun  3 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:16:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 16:54 run_atlas
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas       105 Jun  3 16:54 job.xml
[2025-06-03 18:16:56] -rw-r--r--. 2 boincer umatlas 213412188 Jun  3 16:54 EVNT.45006593._001630.pool.root.1
[2025-06-03 18:16:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 16:54 shared
[2025-06-03 18:16:56] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 16:54 input.tar.gz
[2025-06-03 18:16:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 16:54 start_atlas.sh
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas         0 Jun  3 16:54 boinc_lockfile
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 16:54 pandaJob.out
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas    986853 Jun  3 16:54 agis_schedconf.cvmfs.json
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas   1603667 Jun  3 16:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:16:56] drwx------. 4 boincer umatlas      4096 Jun  3 16:54 pilot3
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas      6708 Jun  3 18:12 init_data.xml
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas 178106933 Jun  3 18:15 HITS.45006595._040679.pool.root.1
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas       529 Jun  3 18:16 boinc_task_state.xml
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas        95 Jun  3 18:16 pilot_heartbeat.json
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas      1032 Jun  3 18:16 memory_monitor_summary.json
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas    306326 Jun  3 18:16 log.45006595._040679.job.log.tgz.1
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:16 boinc_mmap_file
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:16 wrapper_checkpoint.txt
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas      7707 Jun  3 18:16 heartbeat.json
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas      4548 Jun  3 18:16 pilotlog.txt
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas    478770 Jun  3 18:16 log.45006595._040679.job.log.1
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas       357 Jun  3 18:16 output.list
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:16 runtime_log
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas    808960 Jun  3 18:16 result.tar.gz
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas       650 Jun  3 18:16 ayPKDmVgkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOPlKDmcqWM8m.diag
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 18:16 runtime_log.err
[2025-06-03 18:16:56] -rw-r--r--. 1 boincer umatlas     21203 Jun  3 18:16 stderr.txt
[2025-06-03 18:16:56] HITS file was successfully produced:
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas 178106933 Jun  3 18:15 shared/HITS.pool.root.1
[2025-06-03 18:16:56]  *** Contents of shared directory: ***
[2025-06-03 18:16:56] total 383664
[2025-06-03 18:16:56] -rw-r--r--. 2 boincer umatlas 213412188 Jun  3 16:54 ATLAS.root_0
[2025-06-03 18:16:56] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 16:54 input.tar.gz
[2025-06-03 18:16:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 16:54 start_atlas.sh
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas 178106933 Jun  3 18:15 HITS.pool.root.1
[2025-06-03 18:16:56] -rw-------. 1 boincer umatlas    808960 Jun  3 18:16 result.tar.gz
18:16:58 (1065241): run_atlas exited; CPU time 36524.517797
18:16:58 (1065241): called boinc_finish(0)

</stderr_txt>
]]>

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