Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:10 (3799719): wrapper (7.7.26015): starting
16:44:10 (3799719): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:44:10] Arguments: --nthreads 4
[2025-06-05 16:44:10] Threads: 4
[2025-06-05 16:44:10] Checking for CVMFS
[2025-06-05 16:44:10] No cvmfs_config command found, will try listing directly
[2025-06-05 16:44:10] CVMFS is ok
[2025-06-05 16:44:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:44:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:44:10] Further information can be found at the LHC@home message board.
[2025-06-05 16:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:44:10] Checking for apptainer binary...
[2025-06-05 16:44:10] which: no apptainer in ((null))
[2025-06-05 16:44:10] apptainer is not installed, using version from CVMFS
[2025-06-05 16:44:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:44:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 16:44:10] apptainer works
[2025-06-05 16:44:10] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:44:10] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:44:10] Starting ATLAS job with PandaID=6677863786
[2025-06-05 16:44:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:53:00]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:53:00] 2025-06-05 16:52:13,781 | INFO     | extracted standard info from prmon json
[2025-06-05 18:53:00] 2025-06-05 16:52:13,781 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:53:00] 2025-06-05 16:52:13,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:53:00] 2025-06-05 16:52:13,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:53:00] 2025-06-05 16:52:13,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:53:00] 2025-06-05 16:52:13,783 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:53:00] 2025-06-05 16:52:13,784 | INFO     | sum of square deviations: 605592750.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,784 | INFO     | sum of deviations: 17641595707.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,784 | INFO     | mean x: 1749138480.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,784 | INFO     | mean y: 2286967.792
[2025-06-05 18:53:00] 2025-06-05 16:52:13,785 | INFO     | -- intersect: -50952077825.57203
[2025-06-05 18:53:00] 2025-06-05 16:52:13,785 | INFO     | intersect: -50952077825.57203
[2025-06-05 18:53:00] 2025-06-05 16:52:13,785 | INFO     | chi2: 1.6674913292341282
[2025-06-05 18:53:00] 2025-06-05 16:52:13,785 | INFO     | sum of square deviations: 535786790.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | sum of deviations: 16893946919.5
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | mean x: 1749138327.5
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | mean y: 2285333.441666667
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | -- intersect: -55149970398.074234
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | intersect: -55149970398.074234
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | chi2: 1.6701511605245059
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | current chi2=1.6701511605245059 (change=-0.15951095179602892 %)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,786 | INFO     | right removable region: 119
[2025-06-05 18:53:00] 2025-06-05 16:52:13,797 | INFO     | sum of square deviations: 535786790.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,798 | INFO     | sum of deviations: -2084707757.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,798 | INFO     | mean x: 1749138632.5
[2025-06-05 18:53:00] 2025-06-05 16:52:13,798 | INFO     | mean y: 2329366.0833333335
[2025-06-05 18:53:00] 2025-06-05 16:52:13,798 | INFO     | -- intersect: 6808101630.907411
[2025-06-05 18:53:00] 2025-06-05 16:52:13,798 | INFO     | intersect: 6808101630.907411
[2025-06-05 18:53:00] 2025-06-05 16:52:13,799 | INFO     | chi2: 0.006838196135585501
[2025-06-05 18:53:00] 2025-06-05 16:52:13,799 | INFO     | current chi2=0.006838196135585501 (change=99.58991114282279 %)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,799 | INFO     | sum of square deviations: 471562330.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | sum of deviations: -2029202880.9999995
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | mean x: 1749138785.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | mean y: 2329215.208695652
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | -- intersect: 7529133703.155896
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | intersect: 7529133703.155896
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | chi2: 0.0063917086504130406
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | current chi2=0.0063917086504130406 (change=6.529316742597804 %)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | left removable region: 20
[2025-06-05 18:53:00] 2025-06-05 16:52:13,800 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | sum of deviations: -723776041.0000002
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | mean x: 1749138907.0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | mean y: 2325583.121212121
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | -- intersect: 4210452295.348302
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | intersect: 4210452295.348302
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | chi2: 0.004805976051877256
[2025-06-05 18:53:00] 2025-06-05 16:52:13,801 | INFO     | -- intersect: 4210452295.348302
[2025-06-05 18:53:00] 2025-06-05 16:52:13,802 | INFO     | current memory leak: -2.41 B/s (using 99 data points, chi2=0.00)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | ..............................
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . Timing measurements:
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . get job = 0 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . initial setup = 1 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . payload setup = 9 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . stage-in = 0 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . payload execution = 7630 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . stage-out = 0 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,803 | INFO     | . log creation = 0 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,804 | INFO     | ..............................
[2025-06-05 18:53:00] 2025-06-05 16:52:13,828 | INFO     | sufficient remaining disk space (3272941240320 B)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,833 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | 
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | job summary report
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | --------------------------------------------------
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | PanDA job id: 6677863786
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | task id: 45006595
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | errors: (none)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:53:00] 2025-06-05 16:52:13,906 | INFO     | pilot state: finished 
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | transexitcode: 0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | exeerrorcode: 0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | exeerrordiag: 
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | exitcode: 0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | exitmsg: OK
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | cpuconsumptiontime: 28997 s
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | nevents: 400
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | neventsw: 0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | pid: 3811205
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | pgrp: 3811205
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | corecount: 4
[2025-06-05 18:53:00] 2025-06-05 16:52:13,907 | INFO     | event service: False
[2025-06-05 18:53:00] 2025-06-05 16:52:13,908 | INFO     | sizes: {0: 2397182, 1: 2397381, 7: 2397587, 11: 2397615, 7644: 2425273, 7645: 2434236, 7646: 2434420, 7652: 2434590}
[2025-06-05 18:53:00] 2025-06-05 16:52:13,908 | INFO     | --------------------------------------------------
[2025-06-05 18:53:00] 2025-06-05 16:52:13,908 | INFO     | 
[2025-06-05 18:53:00] 2025-06-05 16:52:13,908 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-06-05 18:53:00] 2025-06-05 16:52:13,919 | INFO     | size of work directory /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6677863786: 3038881 B (within 2537553920 B limit)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,920 | INFO     | pfn file=/scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6677863786/HITS.45006595._040613.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,920 | INFO     | total size of present files: 0 B (workdir size: 3038881 B)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,920 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6677863786/HITS.45006595._040613.pool.root.1 since it does not exist
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:53:00] 2025-06-05 16:52:13,943 | INFO     | job 6677863786 has completed (purged errors)
[2025-06-05 18:53:00] 2025-06-05 16:52:13,943 | INFO     | overall cleanup function is called
[2025-06-05 18:53:00] 2025-06-05 16:52:14,639 | INFO     | number of running child processes to parent process 3811205: 1
[2025-06-05 18:53:00] 2025-06-05 16:52:14,639 | INFO     | maximum number of monitored processes: 6
[2025-06-05 18:53:00] 2025-06-05 16:52:14,639 | INFO     | aborting job monitoring since job object (job id=6677863786) has expired
[2025-06-05 18:53:00] 2025-06-05 16:52:14,953 | INFO     | --- collectZombieJob: --- 10, [3811205]
[2025-06-05 18:53:00] 2025-06-05 16:52:14,953 | INFO     | zombie collector waiting for pid 3811205
[2025-06-05 18:53:00] 2025-06-05 16:52:14,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:53:00] 2025-06-05 16:52:14,954 | INFO     | collected zombie processes
[2025-06-05 18:53:00] 2025-06-05 16:52:14,954 | INFO     | will attempt to kill all subprocesses of pid=3811205
[2025-06-05 18:53:00] 2025-06-05 16:52:15,601 | INFO     | process IDs to be killed: [3811205] (in reverse order)
[2025-06-05 18:53:00] 2025-06-05 16:52:15,833 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:53:00] 2025-06-05 16:52:15,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:53:00] 2025-06-05 16:52:15,858 | INFO     | did not find any defunct processes belonging to 3811205
[2025-06-05 18:53:00] 2025-06-05 16:52:15,880 | INFO     | did not find any defunct processes belonging to 3811205
[2025-06-05 18:53:00] 2025-06-05 16:52:15,880 | INFO     | ready for new job
[2025-06-05 18:53:00] 2025-06-05 16:52:15,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:53:00] 2025-06-05 16:52:15,882 | INFO     | **************************************
[2025-06-05 18:53:00] 2025-06-05 16:52:15,882 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:53:00] 2025-06-05 16:52:15,882 | INFO     | **************************************
[2025-06-05 18:53:00] 2025-06-05 16:52:15,882 | INFO     | 
[2025-06-05 18:53:00] 2025-06-05 16:52:15,890 | INFO     | architecture information:
[2025-06-05 18:53:00] 2025-06-05 16:52:15,890 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:53:00] 2025-06-05 16:52:15,913 | INFO     | cat /etc/os-release:
[2025-06-05 18:53:00] NAME="CentOS Linux"
[2025-06-05 18:53:00] VERSION="7 (Core)"
[2025-06-05 18:53:00] ID="centos"
[2025-06-05 18:53:00] ID_LIKE="rhel fedora"
[2025-06-05 18:53:00] VERSION_ID="7"
[2025-06-05 18:53:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:53:00] ANSI_COLOR="0;31"
[2025-06-05 18:53:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:53:00] HOME_URL="https://www.centos.org/"
[2025-06-05 18:53:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:53:00] 
[2025-06-05 18:53:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:53:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:53:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:53:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:53:00] 
[2025-06-05 18:53:00] 2025-06-05 16:52:15,913 | INFO     | **************************************
[2025-06-05 18:53:00] 2025-06-05 16:52:16,416 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-06-05 18:53:00] 2025-06-05 16:52:16,436 | INFO     | sufficient remaining disk space (3272944386048 B)
[2025-06-05 18:53:00] 2025-06-05 16:52:16,437 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:53:00] 2025-06-05 16:52:16,437 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:53:00] 2025-06-05 16:52:16,437 | INFO     | update_server=False
[2025-06-05 18:53:00] 2025-06-05 16:52:16,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:53:00] 2025-06-05 16:52:16,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:53:00] 2025-06-05 16:52:16,437 | INFO     | aborting loop
[2025-06-05 18:53:00] 2025-06-05 16:52:16,831 | INFO     | all job control threads have been joined
[2025-06-05 18:53:00] 2025-06-05 16:52:16,928 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:53:00] 2025-06-05 16:52:16,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:53:00] 2025-06-05 16:52:16,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:53:00] 2025-06-05 16:52:17,105 | INFO     | all data control threads have been joined
[2025-06-05 18:53:00] 2025-06-05 16:52:17,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:53:00] 2025-06-05 16:52:17,442 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:17,443 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:17,532 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:17,725 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:17,817 | INFO     | all payload control threads have been joined
[2025-06-05 18:53:00] 2025-06-05 16:52:17,837 | INFO     | [job] control thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,049 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,110 | INFO     | [data] control thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,202 | INFO     | [job] validate thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,265 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,417 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,437 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:53:00] 2025-06-05 16:52:18,822 | INFO     | [payload] control thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:18,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:53:00] 2025-06-05 16:52:19,345 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:19,922 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:22,694 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:26,961 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:53:00] 2025-06-05 16:52:27,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:53:00] 2025-06-05 16:52:29,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23257955923776)>', '<ExcThread(monitor, started 23257721837312)>']
[2025-06-05 18:53:00] 2025-06-05 16:52:29,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:53:00] 2025-06-05 16:52:29,989 | INFO     | [monitor] control thread has ended
[2025-06-05 18:53:00] 2025-06-05 16:52:34,988 | INFO     | all workflow threads have been joined
[2025-06-05 18:53:00] 2025-06-05 16:52:34,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:53:00] 2025-06-05 16:52:34,988 | INFO     | traces error code: 0
[2025-06-05 18:53:00] 2025-06-05 16:52:34,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:53:00] 2025-06-05 16:52:35,185 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:53:00] 2025-06-05 16:52:35,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:53:00] 2025-06-05 16:52:35,193 [wrapper] pilotpid: 3803775
[2025-06-05 18:53:00] 2025-06-05 16:52:35,196 [wrapper] Pilot exit status: 0
[2025-06-05 18:53:00] 2025-06-05 16:52:35,212 [wrapper] pandaids: 6677863786
[2025-06-05 18:53:00] 2025-06-05 16:52:35,369 [wrapper] cleanup supervisor_pilot 4171286 3803776
[2025-06-05 18:53:00] 2025-06-05 16:52:35,373 [wrapper] Test setup, not cleaning
[2025-06-05 18:53:00] 2025-06-05 16:52:35,377 [wrapper] apfmon messages muted
[2025-06-05 18:53:00] 2025-06-05 16:52:35,381 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:53:00] 2025-06-05 16:52:35,385 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:53:00]  *** Error codes and diagnostics ***
[2025-06-05 18:53:00]     "exeErrorCode": 0,
[2025-06-05 18:53:00]     "exeErrorDiag": "",
[2025-06-05 18:53:00]     "pilotErrorCode": 0,
[2025-06-05 18:53:00]     "pilotErrorDiag": "",
[2025-06-05 18:53:00]  *** Listing of results directory ***
[2025-06-05 18:53:00] total 385056
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:25 queuedata.json
[2025-06-05 18:53:00] -rwx------ 1 boinc boinc     37140 Jun  3 19:26 runpilot2-wrapper.sh
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc       100 Jun  5 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:53:00] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 16:44 run_atlas
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc       105 Jun  5 16:44 job.xml
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc      6685 Jun  5 16:44 init_data.xml
[2025-06-05 18:53:00] -rw-r--r-- 2 boinc boinc 213384267 Jun  5 16:44 EVNT.45006593._001627.pool.root.1
[2025-06-05 18:53:00] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:44 start_atlas.sh
[2025-06-05 18:53:00] drwxrwx--x 2 boinc boinc      4096 Jun  5 16:44 shared
[2025-06-05 18:53:00] -rw-r--r-- 2 boinc boinc    508880 Jun  5 16:44 input.tar.gz
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc         0 Jun  5 16:44 boinc_lockfile
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc      2525 Jun  5 16:44 pandaJob.out
[2025-06-05 18:53:00] -rw------- 1 boinc boinc    983210 Jun  5 16:44 agis_schedconf.cvmfs.json
[2025-06-05 18:53:00] -rw------- 1 boinc boinc   1598969 Jun  5 16:44 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:53:00] drwx------ 4 boinc boinc      4096 Jun  5 16:44 pilot3
[2025-06-05 18:53:00] -rw------- 1 boinc boinc 175049939 Jun  5 18:51 HITS.45006595._040613.pool.root.1
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc       529 Jun  5 18:51 boinc_task_state.xml
[2025-06-05 18:53:00] -rw------- 1 boinc boinc        95 Jun  5 18:51 pilot_heartbeat.json
[2025-06-05 18:53:00] -rw------- 1 boinc boinc      1030 Jun  5 18:52 memory_monitor_summary.json
[2025-06-05 18:53:00] -rw------- 1 boinc boinc    284699 Jun  5 18:52 log.45006595._040613.job.log.tgz.1
[2025-06-05 18:53:00] -rw------- 1 boinc boinc      7696 Jun  5 18:52 heartbeat.json
[2025-06-05 18:53:00] -rw------- 1 boinc boinc      4436 Jun  5 18:52 pilotlog.txt
[2025-06-05 18:53:00] -rw------- 1 boinc boinc    729499 Jun  5 18:52 log.45006595._040613.job.log.1
[2025-06-05 18:53:00] -rw------- 1 boinc boinc       357 Jun  5 18:52 output.list
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc       620 Jun  5 18:52 runtime_log
[2025-06-05 18:53:00] -rw------- 1 boinc boinc   1034240 Jun  5 18:52 result.tar.gz
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc      9025 Jun  5 18:52 runtime_log.err
[2025-06-05 18:53:00] -rw------- 1 boinc boinc       662 Jun  5 18:52 egXNDmJakg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHOlKDmJp0PMn.diag
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc        27 Jun  5 18:52 wrapper_checkpoint.txt
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc      8192 Jun  5 18:53 boinc_mmap_file
[2025-06-05 18:53:00] -rw-r--r-- 1 boinc boinc     21011 Jun  5 18:53 stderr.txt
[2025-06-05 18:53:00] HITS file was successfully produced:
[2025-06-05 18:53:00] -rw------- 1 boinc boinc 175049939 Jun  5 18:51 shared/HITS.pool.root.1
[2025-06-05 18:53:00]  *** Contents of shared directory: ***
[2025-06-05 18:53:00] total 380868
[2025-06-05 18:53:00] -rw-r--r-- 2 boinc boinc 213384267 Jun  5 16:44 ATLAS.root_0
[2025-06-05 18:53:00] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:44 start_atlas.sh
[2025-06-05 18:53:00] -rw-r--r-- 2 boinc boinc    508880 Jun  5 16:44 input.tar.gz
[2025-06-05 18:53:00] -rw------- 1 boinc boinc 175049939 Jun  5 18:51 HITS.pool.root.1
[2025-06-05 18:53:00] -rw------- 1 boinc boinc   1034240 Jun  5 18:52 result.tar.gz
18:53:01 (3799719): run_atlas exited; CPU time 29435.090379
18:53:01 (3799719): called boinc_finish(0)

</stderr_txt>
]]>

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