Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:48:43 (3256865): wrapper (7.7.26015): starting
10:48:43 (3256865): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 10:48:43] Arguments: --nthreads 4
[2025-06-05 10:48:43] Threads: 4
[2025-06-05 10:48:43] Checking for CVMFS
[2025-06-05 10:48:43] No cvmfs_config command found, will try listing directly
[2025-06-05 10:48:43] CVMFS is ok
[2025-06-05 10:48:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:48:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:48:43] Further information can be found at the LHC@home message board.
[2025-06-05 10:48:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:48:43] Checking for apptainer binary...
[2025-06-05 10:48:43] which: no apptainer in ((null))
[2025-06-05 10:48:43] apptainer is not installed, using version from CVMFS
[2025-06-05 10:48:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:48:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-05 10:48:43] apptainer works
[2025-06-05 10:48:43] Set ATHENA_PROC_NUMBER=4
[2025-06-05 10:48:43] Set ATHENA_CORE_NUMBER=4
[2025-06-05 10:48:43] Starting ATLAS job with PandaID=6677862491
[2025-06-05 10:48:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:22:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:22:43] 2025-06-05 11:18:33,123 | INFO     | executing command: lscpu
[2025-06-05 13:22:43] 2025-06-05 11:18:33,188 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 13:22:43] 2025-06-05 11:18:35,724 | WARNING  | process 3267649 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 13:22:43] 2025-06-05 11:18:35,724 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677862491/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:22:43] 2025-06-05 11:18:36,078 | INFO     | number of running child processes to parent process 3267649: 1
[2025-06-05 13:22:43] 2025-06-05 11:18:36,078 | INFO     | maximum number of monitored processes: 6
[2025-06-05 13:22:43] 2025-06-05 11:18:37,483 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 13:22:43] 2025-06-05 11:18:37,484 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677862491/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,484 | INFO     | extracted standard info from prmon json
[2025-06-05 13:22:43] 2025-06-05 11:18:37,485 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:22:43] 2025-06-05 11:18:37,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:22:43] 2025-06-05 11:18:37,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:22:43] 2025-06-05 11:18:37,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:22:43] 2025-06-05 11:18:37,489 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:22:43] 2025-06-05 11:18:37,489 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,490 | INFO     | sum of deviations: 14683764328.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,490 | INFO     | mean x: 1749117815.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,490 | INFO     | mean y: 2311047.4353741496
[2025-06-05 13:22:43] 2025-06-05 11:18:37,490 | INFO     | -- intersect: -26073999157.62084
[2025-06-05 13:22:43] 2025-06-05 11:18:37,490 | INFO     | intersect: -26073999157.62084
[2025-06-05 13:22:43] 2025-06-05 11:18:37,491 | INFO     | chi2: 1.6992474720723776
[2025-06-05 13:22:43] 2025-06-05 11:18:37,491 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 13:22:43] 2025-06-05 11:18:37,492 | INFO     | sum of deviations: 13983806499.5
[2025-06-05 13:22:43] 2025-06-05 11:18:37,492 | INFO     | mean x: 1749117662.5
[2025-06-05 13:22:43] 2025-06-05 11:18:37,492 | INFO     | mean y: 2309947.528169014
[2025-06-05 13:22:43] 2025-06-05 11:18:37,492 | INFO     | -- intersect: -27547747742.755024
[2025-06-05 13:22:43] 2025-06-05 11:18:37,492 | INFO     | intersect: -27547747742.755024
[2025-06-05 13:22:43] 2025-06-05 11:18:37,493 | INFO     | chi2: 1.7014442100535647
[2025-06-05 13:22:43] 2025-06-05 11:18:37,493 | INFO     | current chi2=1.7014442100535647 (change=-0.1292771075014769 %)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,493 | INFO     | right removable region: 141
[2025-06-05 13:22:43] 2025-06-05 11:18:37,493 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 13:22:43] 2025-06-05 11:18:37,494 | INFO     | sum of deviations: -8748877115.000002
[2025-06-05 13:22:43] 2025-06-05 11:18:37,494 | INFO     | mean x: 1749117967.5
[2025-06-05 13:22:43] 2025-06-05 11:18:37,494 | INFO     | mean y: 2347350.5211267606
[2025-06-05 13:22:43] 2025-06-05 11:18:37,494 | INFO     | -- intersect: 17238863837.05175
[2025-06-05 13:22:43] 2025-06-05 11:18:37,494 | INFO     | intersect: 17238863837.05175
[2025-06-05 13:22:43] 2025-06-05 11:18:37,495 | INFO     | chi2: 0.052402072484013136
[2025-06-05 13:22:43] 2025-06-05 11:18:37,495 | INFO     | current chi2=0.052402072484013136 (change=96.91616004465175 %)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,495 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,496 | INFO     | sum of deviations: -6261869782.999998
[2025-06-05 13:22:43] 2025-06-05 11:18:37,496 | INFO     | mean x: 1749118120.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,496 | INFO     | mean y: 2343122.868613139
[2025-06-05 13:22:43] 2025-06-05 11:18:37,496 | INFO     | -- intersect: 13739795032.38061
[2025-06-05 13:22:43] 2025-06-05 11:18:37,496 | INFO     | intersect: 13739795032.38061
[2025-06-05 13:22:43] 2025-06-05 11:18:37,496 | INFO     | chi2: 0.04350773502647124
[2025-06-05 13:22:43] 2025-06-05 11:18:37,497 | INFO     | current chi2=0.04350773502647124 (change=16.97325513271519 %)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,497 | INFO     | left removable region: 20
[2025-06-05 13:22:43] 2025-06-05 11:18:37,497 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | sum of deviations: -602958403.9999999
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | mean x: 1749118242.0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | mean y: 2331586.9256198346
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | -- intersect: 1922333453.3278892
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | intersect: 1922333453.3278892
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | chi2: 0.013105066459578233
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | -- intersect: 1922333453.3278892
[2025-06-05 13:22:43] 2025-06-05 11:18:37,498 | INFO     | current memory leak: -1.10 B/s (using 121 data points, chi2=0.01)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,499 | INFO     | ..............................
[2025-06-05 13:22:43] 2025-06-05 11:18:37,499 | INFO     | . Timing measurements:
[2025-06-05 13:22:43] 2025-06-05 11:18:37,499 | INFO     | . get job = 0 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,499 | INFO     | . initial setup = 1 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,499 | INFO     | . payload setup = 7 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,499 | INFO     | . stage-in = 0 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,500 | INFO     | . payload execution = 8950 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,500 | INFO     | . stage-out = 0 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,500 | INFO     | . log creation = 0 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,500 | INFO     | ..............................
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | 
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | job summary report
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | --------------------------------------------------
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | PanDA job id: 6677862491
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | task id: 45006595
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | errors: (none)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | pilot state: finished 
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | transexitcode: 0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,606 | INFO     | exeerrorcode: 0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | exeerrordiag: 
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | exitcode: 0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | exitmsg: OK
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | cpuconsumptiontime: 34107 s
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | nevents: 400
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | neventsw: 0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | pid: 3267649
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | pgrp: 3267649
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | corecount: 4
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | event service: False
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 8961: 2425768, 8962: 2434915, 8968: 2435029}
[2025-06-05 13:22:43] 2025-06-05 11:18:37,607 | INFO     | --------------------------------------------------
[2025-06-05 13:22:43] 2025-06-05 11:18:37,608 | INFO     | 
[2025-06-05 13:22:43] 2025-06-05 11:18:37,608 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-05 13:22:43] 2025-06-05 11:18:37,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,627 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,627 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,627 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:22:43] 2025-06-05 11:18:37,629 | INFO     | job 6677862491 has completed (purged errors)
[2025-06-05 13:22:43] 2025-06-05 11:18:37,629 | INFO     | overall cleanup function is called
[2025-06-05 13:22:43] 2025-06-05 11:18:38,635 | INFO     | --- collectZombieJob: --- 10, [3267649]
[2025-06-05 13:22:43] 2025-06-05 11:18:38,635 | INFO     | zombie collector waiting for pid 3267649
[2025-06-05 13:22:43] 2025-06-05 11:18:38,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:22:43] 2025-06-05 11:18:38,635 | INFO     | collected zombie processes
[2025-06-05 13:22:43] 2025-06-05 11:18:38,635 | INFO     | will attempt to kill all subprocesses of pid=3267649
[2025-06-05 13:22:43] 2025-06-05 11:18:38,991 | INFO     | process IDs to be killed: [3267649] (in reverse order)
[2025-06-05 13:22:43] 2025-06-05 11:18:39,098 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:22:43] 2025-06-05 11:18:39,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:22:43] 2025-06-05 11:18:39,110 | INFO     | did not find any defunct processes belonging to 3267649
[2025-06-05 13:22:43] 2025-06-05 11:18:39,121 | INFO     | did not find any defunct processes belonging to 3267649
[2025-06-05 13:22:43] 2025-06-05 11:18:39,121 | INFO     | ready for new job
[2025-06-05 13:22:43] 2025-06-05 11:18:39,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:22:43] 2025-06-05 11:18:39,123 | INFO     | **************************************
[2025-06-05 13:22:43] 2025-06-05 11:18:39,123 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:22:43] 2025-06-05 11:18:39,123 | INFO     | **************************************
[2025-06-05 13:22:43] 2025-06-05 11:18:39,124 | INFO     | 
[2025-06-05 13:22:43] 2025-06-05 11:18:39,127 | INFO     | architecture information:
[2025-06-05 13:22:43] 2025-06-05 11:18:39,128 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:22:43] 2025-06-05 11:18:39,143 | INFO     | cat /etc/os-release:
[2025-06-05 13:22:43] NAME="CentOS Linux"
[2025-06-05 13:22:43] VERSION="7 (Core)"
[2025-06-05 13:22:43] ID="centos"
[2025-06-05 13:22:43] ID_LIKE="rhel fedora"
[2025-06-05 13:22:43] VERSION_ID="7"
[2025-06-05 13:22:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:22:43] ANSI_COLOR="0;31"
[2025-06-05 13:22:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:22:43] HOME_URL="https://www.centos.org/"
[2025-06-05 13:22:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:22:43] 
[2025-06-05 13:22:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:22:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:22:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:22:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:22:43] 
[2025-06-05 13:22:43] 2025-06-05 11:18:39,143 | INFO     | **************************************
[2025-06-05 13:22:43] 2025-06-05 11:18:39,646 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-05 13:22:43] 2025-06-05 11:18:39,663 | INFO     | sufficient remaining disk space (667359903744 B)
[2025-06-05 13:22:43] 2025-06-05 11:18:39,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:22:43] 2025-06-05 11:18:39,664 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:22:43] 2025-06-05 11:18:39,664 | INFO     | update_server=False
[2025-06-05 13:22:43] 2025-06-05 11:18:39,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:22:43] 2025-06-05 11:18:39,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:22:43] 2025-06-05 11:18:39,665 | INFO     | aborting loop
[2025-06-05 13:22:43] 2025-06-05 11:18:39,776 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:22:43] 2025-06-05 11:18:39,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:22:43] 2025-06-05 11:18:39,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:22:43] 2025-06-05 11:18:39,980 | INFO     | all data control threads have been joined
[2025-06-05 13:22:43] 2025-06-05 11:18:40,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:22:43] 2025-06-05 11:18:40,526 | INFO     | all payload control threads have been joined
[2025-06-05 13:22:43] 2025-06-05 11:18:40,669 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:40,670 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:40,922 | INFO     | all job control threads have been joined
[2025-06-05 13:22:43] 2025-06-05 11:18:40,937 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:40,986 | INFO     | [data] control thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,038 | INFO     | [job] validate thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,038 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,215 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,529 | INFO     | [payload] control thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,574 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,741 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,897 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:41,925 | INFO     | [job] control thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:42,037 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:42,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:22:43] 2025-06-05 11:18:42,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:22:43] 2025-06-05 11:18:43,622 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:46,635 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:50,571 | INFO     | job.realtimelogging is not enabled
[2025-06-05 13:22:43] 2025-06-05 11:18:51,231 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-06-05 13:22:43] 2025-06-05 11:18:51,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:22:43] 2025-06-05 11:18:53,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22727598917440)>', '<ExcThread(monitor, started 22727364679424)>']
[2025-06-05 13:22:43] 2025-06-05 11:18:53,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:22:43] 2025-06-05 11:18:53,847 | INFO     | [monitor] control thread has ended
[2025-06-05 13:22:43] 2025-06-05 11:18:58,585 | INFO     | all workflow threads have been joined
[2025-06-05 13:22:43] 2025-06-05 11:18:58,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:22:43] 2025-06-05 11:18:58,586 | INFO     | traces error code: 0
[2025-06-05 13:22:43] 2025-06-05 11:18:58,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:22:43] 2025-06-05 11:18:58,735 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:22:43] 2025-06-05 11:18:58,738 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:22:43] 2025-06-05 11:18:58,741 [wrapper] pilotpid: 3260582
[2025-06-05 13:22:43] 2025-06-05 11:18:58,744 [wrapper] Pilot exit status: 0
[2025-06-05 13:22:43] 2025-06-05 11:18:58,755 [wrapper] pandaids: 6677862491
[2025-06-05 13:22:43] 2025-06-05 11:18:58,828 [wrapper] cleanup supervisor_pilot 3490680 3260583
[2025-06-05 13:22:43] 2025-06-05 11:18:58,831 [wrapper] Test setup, not cleaning
[2025-06-05 13:22:43] 2025-06-05 11:18:58,834 [wrapper] apfmon messages muted
[2025-06-05 13:22:43] 2025-06-05 11:18:58,837 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:22:43] 2025-06-05 11:18:58,841 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:22:43]  *** Error codes and diagnostics ***
[2025-06-05 13:22:43]     "exeErrorCode": 0,
[2025-06-05 13:22:43]     "exeErrorDiag": "",
[2025-06-05 13:22:43]     "pilotErrorCode": 0,
[2025-06-05 13:22:43]     "pilotErrorDiag": "",
[2025-06-05 13:22:43]  *** Listing of results directory ***
[2025-06-05 13:22:43] total 389772
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:23 queuedata.json
[2025-06-05 13:22:43] -rwx------ 1 boinc boinc     37140 Jun  3 19:24 runpilot2-wrapper.sh
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:22:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:48 run_atlas
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:48 job.xml
[2025-06-05 13:22:43] -rw-r--r-- 2 boinc boinc 214955692 Jun  5 10:48 EVNT.45006593._001622.pool.root.1
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc      6635 Jun  5 10:48 init_data.xml
[2025-06-05 13:22:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:48 start_atlas.sh
[2025-06-05 13:22:43] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:48 shared
[2025-06-05 13:22:43] -rw-r--r-- 2 boinc boinc    508884 Jun  5 10:48 input.tar.gz
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:48 boinc_lockfile
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc      2525 Jun  5 10:48 pandaJob.out
[2025-06-05 13:22:43] -rw------- 1 boinc boinc    983281 Jun  5 10:48 agis_schedconf.cvmfs.json
[2025-06-05 13:22:43] -rw------- 1 boinc boinc   1598969 Jun  5 10:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:22:43] drwx------ 4 boinc boinc      4096 Jun  5 10:48 pilot3
[2025-06-05 13:22:43] -rw------- 1 boinc boinc 178060843 Jun  5 13:17 HITS.45006595._040481.pool.root.1
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc       528 Jun  5 13:17 boinc_task_state.xml
[2025-06-05 13:22:43] -rw------- 1 boinc boinc        95 Jun  5 13:18 pilot_heartbeat.json
[2025-06-05 13:22:43] -rw------- 1 boinc boinc      1036 Jun  5 13:18 memory_monitor_summary.json
[2025-06-05 13:22:43] -rw------- 1 boinc boinc    288567 Jun  5 13:18 log.45006595._040481.job.log.tgz.1
[2025-06-05 13:22:43] -rw------- 1 boinc boinc      7722 Jun  5 13:18 heartbeat.json
[2025-06-05 13:22:43] -rw------- 1 boinc boinc      4435 Jun  5 13:18 pilotlog.txt
[2025-06-05 13:22:43] -rw------- 1 boinc boinc    849703 Jun  5 13:18 log.45006595._040481.job.log.1
[2025-06-05 13:22:43] -rw------- 1 boinc boinc       357 Jun  5 13:18 output.list
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:18 runtime_log
[2025-06-05 13:22:43] -rw------- 1 boinc boinc   1157120 Jun  5 13:18 result.tar.gz
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc      9025 Jun  5 13:18 runtime_log.err
[2025-06-05 13:22:43] -rw------- 1 boinc boinc       662 Jun  5 13:18 cUPNDmMYkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtMlKDmgsrWLo.diag
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc        26 Jun  5 13:22 wrapper_checkpoint.txt
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:22 boinc_mmap_file
[2025-06-05 13:22:43] -rw-r--r-- 1 boinc boinc     20878 Jun  5 13:22 stderr.txt
[2025-06-05 13:22:43] HITS file was successfully produced:
[2025-06-05 13:22:43] -rw------- 1 boinc boinc 178060843 Jun  5 13:17 shared/HITS.pool.root.1
[2025-06-05 13:22:43]  *** Contents of shared directory: ***
[2025-06-05 13:22:43] total 385464
[2025-06-05 13:22:43] -rw-r--r-- 2 boinc boinc 214955692 Jun  5 10:48 ATLAS.root_0
[2025-06-05 13:22:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:48 start_atlas.sh
[2025-06-05 13:22:43] -rw-r--r-- 2 boinc boinc    508884 Jun  5 10:48 input.tar.gz
[2025-06-05 13:22:43] -rw------- 1 boinc boinc 178060843 Jun  5 13:17 HITS.pool.root.1
[2025-06-05 13:22:43] -rw------- 1 boinc boinc   1157120 Jun  5 13:18 result.tar.gz
13:22:45 (3256865): run_atlas exited; CPU time 34444.698224
13:22:45 (3256865): called boinc_finish(0)

</stderr_txt>
]]>

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