Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:17:31 (3171318): wrapper (7.7.26015): starting
17:17:31 (3171318): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:17:31] Arguments: --nthreads 8
[2025-06-03 17:17:31] Threads: 8
[2025-06-03 17:17:31] Checking for CVMFS
[2025-06-03 17:17:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:17:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:17:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:17:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:17:32] 2.12.6.0 1723263 22634 197868 146756 3 122 25041962 40960001 32429 16776704 0 300560938 99.769 175769778 37833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 17:17:32] CVMFS is ok
[2025-06-03 17:17:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:17:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:17:32] Further information can be found at the LHC@home message board.
[2025-06-03 17:17:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:17:32] Checking for apptainer binary...
[2025-06-03 17:17:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:17:32] Running /usr/bin/apptainer --version
[2025-06-03 17:17:32] apptainer version 1.4.1-1.el9
[2025-06-03 17:17:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:17:32] c8-16-2.aglt2.org
[2025-06-03 17:17:32] apptainer works
[2025-06-03 17:17:32] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:17:32] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:17:32] Starting ATLAS job with PandaID=6677383942
[2025-06-03 17:17:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:09:47]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:09:47]  lfn=log.45006595._003879.job.log.tgz.1
[2025-06-03 18:09:47]  mtime=0
[2025-06-03 18:09:47]  protocol_id=None
[2025-06-03 18:09:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:09:47]  replicas=None
[2025-06-03 18:09:47]  scope=mc23_13p6TeV
[2025-06-03 18:09:47]  status=None
[2025-06-03 18:09:47]  status_code=0
[2025-06-03 18:09:47]  storage_token=
[2025-06-03 18:09:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677383942/log.45006595._003879.job.log.tgz.1
[2025-06-03 18:09:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/1e/log.45006595._003879.job.log.tgz.1
[2025-06-03 18:09:47]  workdir=None
[2025-06-03 18:09:47] ]
[2025-06-03 18:09:47] 2025-06-03 22:09:24,872 | INFO     | transferring file log.45006595._003879.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677383942/log.45006595._003879.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 18:09:47] 2025-06-03 22:09:24,873 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677383942/log.45006595._003879.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._003879.job
[2025-06-03 18:09:47] 2025-06-03 22:09:24,891 | INFO     | adding to output.list: log.45006595._003879.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/1e/log.45006595._003879.job.log.tg
[2025-06-03 18:09:47] 2025-06-03 22:09:24,892 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:09:47] 2025-06-03 22:09:24,892 | INFO     | summary of transferred files:
[2025-06-03 18:09:47] 2025-06-03 22:09:24,892 | INFO     |  -- lfn=log.45006595._003879.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:09:47] 2025-06-03 22:09:24,892 | INFO     | stage-out finished correctly
[2025-06-03 18:09:47] 2025-06-03 22:09:26,177 | INFO     | monitor loop #223: job 0:6677383942 is in state 'finished'
[2025-06-03 18:09:47] 2025-06-03 22:09:26,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:09:47] 2025-06-03 22:09:27,103 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:09:47] 2025-06-03 22:09:28,680 | INFO     | monitor loop #224: job 0:6677383942 is in state 'finished'
[2025-06-03 18:09:47] 2025-06-03 22:09:28,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:09:47] 2025-06-03 22:09:29,822 | INFO     | PID=3177823 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 18:09:47] 2025-06-03 22:09:29,822 | INFO     | .. there are 34 such processes running
[2025-06-03 18:09:47] 2025-06-03 22:09:29,871 | INFO     | job 6677383942 has state=finished
[2025-06-03 18:09:47] 2025-06-03 22:09:29,871 | INFO     | preparing for final server update for job 6677383942 in state='finished'
[2025-06-03 18:09:47] 2025-06-03 22:09:29,871 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:09:47] 2025-06-03 22:09:29,872 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:09:47] 2025-06-03 22:09:29,872 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:09:47] 2025-06-03 22:09:29,872 | INFO     | job 6677383942 has finished - writing final server update
[2025-06-03 18:09:47] 2025-06-03 22:09:29,872 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:09:47] 2025-06-03 22:09:29,890 | INFO     | executing command: lscpu
[2025-06-03 18:09:47] 2025-06-03 22:09:29,953 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:09:47] 2025-06-03 22:09:31,183 | INFO     | monitor loop #225: job 0:6677383942 is in state 'finished'
[2025-06-03 18:09:47] 2025-06-03 22:09:31,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:09:47] 2025-06-03 22:09:33,689 | INFO     | monitor loop #226: job 0:6677383942 is in state 'finished'
[2025-06-03 18:09:47] 2025-06-03 22:09:33,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:09:47] 2025-06-03 22:09:33,977 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 18:09:47] 2025-06-03 22:09:33,977 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677383942/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:09:47] 2025-06-03 22:09:33,978 | INFO     | extracted standard info from prmon json
[2025-06-03 18:09:47] 2025-06-03 22:09:33,978 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:09:47] 2025-06-03 22:09:33,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:09:47] 2025-06-03 22:09:33,978 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:09:47] 2025-06-03 22:09:33,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:09:47] 2025-06-03 22:09:33,979 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | sum of square deviations: 26400495.0
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | sum of deviations: 5207762333.000001
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | mean x: 1748987107.5
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | mean y: 2438070.409090909
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | -- intersect: -345002804419.9731
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | intersect: -345002804419.9731
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | chi2: 0.7039912607504598
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | -- intersect: -345002804419.9731
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | current memory leak: 197.26 B/s (using 44 data points, chi2=0.70)
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | ..............................
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . Timing measurements:
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . get job = 0 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . initial setup = 2 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . payload setup = 6 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . stage-in = 0 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . payload execution = 3074 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,980 | INFO     | . stage-out = 0 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,981 | INFO     | . log creation = 0 s
[2025-06-03 18:09:47] 2025-06-03 22:09:33,981 | INFO     | ..............................
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | 
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | job summary report
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | --------------------------------------------------
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | PanDA job id: 6677383942
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | task id: 45006595
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | errors: (none)
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | pilot state: finished 
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | transexitcode: 0
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | exeerrorcode: 0
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | exeerrordiag: 
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | exitcode: 0
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | exitmsg: OK
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | cpuconsumptiontime: 18684 s
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | nevents: 400
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | neventsw: 0
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | pid: 3195547
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | pgrp: 3195547
[2025-06-03 18:09:47] 2025-06-03 22:09:34,390 | INFO     | corecount: 8
[2025-06-03 18:09:47] 2025-06-03 22:09:34,391 | INFO     | event service: False
[2025-06-03 18:09:47] 2025-06-03 22:09:34,391 | INFO     | sizes: {0: 2405004, 1: 2405203, 5: 2405409, 11: 2405465, 3084: 2430791, 3085: 2430790, 3087: 2439915, 3089: 2439971, 3096: 2440141}
[2025-06-03 18:09:47] 2025-06-03 22:09:34,391 | INFO     | --------------------------------------------------
[2025-06-03 18:09:47] 2025-06-03 22:09:34,391 | INFO     | 
[2025-06-03 18:09:47] 2025-06-03 22:09:34,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | job 6677383942 has completed (purged errors)
[2025-06-03 18:09:47] 2025-06-03 22:09:34,410 | INFO     | overall cleanup function is called
[2025-06-03 18:09:47] 2025-06-03 22:09:35,424 | INFO     | --- collectZombieJob: --- 10, [3195547]
[2025-06-03 18:09:47] 2025-06-03 22:09:35,425 | INFO     | zombie collector waiting for pid 3195547
[2025-06-03 18:09:47] 2025-06-03 22:09:35,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:09:47] 2025-06-03 22:09:35,425 | INFO     | collected zombie processes
[2025-06-03 18:09:47] 2025-06-03 22:09:35,425 | INFO     | will attempt to kill all subprocesses of pid=3195547
[2025-06-03 18:09:47] 2025-06-03 22:09:35,820 | INFO     | process IDs to be killed: [3195547] (in reverse order)
[2025-06-03 18:09:47] 2025-06-03 22:09:35,981 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:09:47] 2025-06-03 22:09:35,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:09:47] 2025-06-03 22:09:36,003 | INFO     | did not find any defunct processes belonging to 3195547
[2025-06-03 18:09:47] 2025-06-03 22:09:36,023 | INFO     | did not find any defunct processes belonging to 3195547
[2025-06-03 18:09:47] 2025-06-03 22:09:36,023 | INFO     | ready for new job
[2025-06-03 18:09:47] 2025-06-03 22:09:36,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:09:47] 2025-06-03 22:09:36,024 | INFO     | **************************************
[2025-06-03 18:09:47] 2025-06-03 22:09:36,024 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:09:47] 2025-06-03 22:09:36,024 | INFO     | **************************************
[2025-06-03 18:09:47] 2025-06-03 22:09:36,024 | INFO     | 
[2025-06-03 18:09:47] 2025-06-03 22:09:36,042 | INFO     | architecture information:
[2025-06-03 18:09:47] 2025-06-03 22:09:36,043 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:09:47] 2025-06-03 22:09:36,058 | INFO     | cat /etc/os-release:
[2025-06-03 18:09:47] NAME="CentOS Linux"
[2025-06-03 18:09:47] VERSION="7 (Core)"
[2025-06-03 18:09:47] ID="centos"
[2025-06-03 18:09:47] ID_LIKE="rhel fedora"
[2025-06-03 18:09:47] VERSION_ID="7"
[2025-06-03 18:09:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:09:47] ANSI_COLOR="0;31"
[2025-06-03 18:09:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:09:47] HOME_URL="https://www.centos.org/"
[2025-06-03 18:09:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:09:47] 
[2025-06-03 18:09:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:09:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:09:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:09:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:09:47] 
[2025-06-03 18:09:47] 2025-06-03 22:09:36,058 | INFO     | **************************************
[2025-06-03 18:09:47] 2025-06-03 22:09:36,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 18:09:47] 2025-06-03 22:09:36,579 | INFO     | sufficient remaining disk space (171776671744 B)
[2025-06-03 18:09:47] 2025-06-03 22:09:36,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:09:47] 2025-06-03 22:09:36,579 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:09:47] 2025-06-03 22:09:36,580 | INFO     | update_server=False
[2025-06-03 18:09:47] 2025-06-03 22:09:36,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:09:47] 2025-06-03 22:09:36,580 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:09:47] 2025-06-03 22:09:36,581 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:09:47] 2025-06-03 22:09:36,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:09:47] 2025-06-03 22:09:36,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:09:47] 2025-06-03 22:09:36,583 | INFO     | all data control threads have been joined
[2025-06-03 18:09:47] 2025-06-03 22:09:36,732 | INFO     | all payload control threads have been joined
[2025-06-03 18:09:47] 2025-06-03 22:09:37,076 | INFO     | all job control threads have been joined
[2025-06-03 18:09:47] 2025-06-03 22:09:37,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:09:47] 2025-06-03 22:09:37,199 | INFO     | aborting loop
[2025-06-03 18:09:47] 2025-06-03 22:09:37,585 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,588 | INFO     | [data] control thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:09:47] 2025-06-03 22:09:37,692 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,737 | INFO     | [payload] control thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,848 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,887 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,899 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:37,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:09:47] 2025-06-03 22:09:38,082 | INFO     | [job] control thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:38,204 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:38,303 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:38,337 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:38,448 | INFO     | [job] validate thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:39,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:09:47] 2025-06-03 22:09:39,977 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:40,045 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:41,654 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:09:47] 2025-06-03 22:09:41,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692195583808)>', '<ExcThread(monitor, started 139691697354496)>']
[2025-06-03 18:09:47] 2025-06-03 22:09:42,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:09:47] 2025-06-03 22:09:42,608 | INFO     | [monitor] control thread has ended
[2025-06-03 18:09:47] 2025-06-03 22:09:46,767 | INFO     | all workflow threads have been joined
[2025-06-03 18:09:47] 2025-06-03 22:09:46,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:09:47] 2025-06-03 22:09:46,767 | INFO     | traces error code: 0
[2025-06-03 18:09:47] 2025-06-03 22:09:46,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:09:47] 2025-06-03 22:09:47,063 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:09:47] 2025-06-03 22:09:47,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:09:47] 2025-06-03 22:09:47,068 [wrapper] pilotpid: 3177823
[2025-06-03 18:09:47] 2025-06-03 22:09:47,070 [wrapper] Pilot exit status: 0
[2025-06-03 18:09:47] 2025-06-03 22:09:47,083 [wrapper] pandaids: 6677383942
[2025-06-03 18:09:47] 2025-06-03 22:09:47,199 [wrapper] cleanup supervisor_pilot 4073780 3177825
[2025-06-03 18:09:47] 2025-06-03 22:09:47,202 [wrapper] Test setup, not cleaning
[2025-06-03 18:09:47] 2025-06-03 22:09:47,204 [wrapper] apfmon messages muted
[2025-06-03 18:09:47] 2025-06-03 22:09:47,206 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:09:47] 2025-06-03 22:09:47,208 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:09:47]  *** Error codes and diagnostics ***
[2025-06-03 18:09:47]     "exeErrorCode": 0,
[2025-06-03 18:09:47]     "exeErrorDiag": "",
[2025-06-03 18:09:47]     "pilotErrorCode": 0,
[2025-06-03 18:09:47]     "pilotErrorDiag": "",
[2025-06-03 18:09:47]  *** Listing of results directory ***
[2025-06-03 18:09:47] total 387576
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 12:11 pilot3.tar.gz
[2025-06-03 18:09:47] -rwx------. 1 boincer umatlas     37140 Jun  2 12:34 runpilot2-wrapper.sh
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 12:34 queuedata.json
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas       100 Jun  3 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:09:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 17:17 run_atlas
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas       105 Jun  3 17:17 job.xml
[2025-06-03 18:09:47] -rw-r--r--. 2 boincer umatlas 216353873 Jun  3 17:17 EVNT.45006593._000156.pool.root.1
[2025-06-03 18:09:47] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 17:17 input.tar.gz
[2025-06-03 18:09:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 17:17 start_atlas.sh
[2025-06-03 18:09:47] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 17:17 shared
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas         0 Jun  3 17:17 boinc_lockfile
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas      2520 Jun  3 17:17 pandaJob.out
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas    986853 Jun  3 17:17 agis_schedconf.cvmfs.json
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:09:47] drwx------. 4 boincer umatlas      4096 Jun  3 17:17 pilot3
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas      7160 Jun  3 18:01 init_data.xml
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas 175501210 Jun  3 18:08 HITS.45006595._003879.pool.root.1
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas       529 Jun  3 18:08 boinc_task_state.xml
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas      1038 Jun  3 18:09 memory_monitor_summary.json
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas    273683 Jun  3 18:09 log.45006595._003879.job.log.tgz.1
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas      7693 Jun  3 18:09 heartbeat.json
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas        95 Jun  3 18:09 pilot_heartbeat.json
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas      4477 Jun  3 18:09 pilotlog.txt
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:09 wrapper_checkpoint.txt
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:09 boinc_mmap_file
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas    324478 Jun  3 18:09 log.45006595._003879.job.log.1
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas       357 Jun  3 18:09 output.list
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:09 runtime_log
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas    614400 Jun  3 18:09 result.tar.gz
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 18:09 runtime_log.err
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas       653 Jun  3 18:09 J76NDmoINg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvpVKDmxLof6m.diag
[2025-06-03 18:09:47] -rw-r--r--. 1 boincer umatlas     21725 Jun  3 18:09 stderr.txt
[2025-06-03 18:09:47] HITS file was successfully produced:
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas 175501210 Jun  3 18:08 shared/HITS.pool.root.1
[2025-06-03 18:09:47]  *** Contents of shared directory: ***
[2025-06-03 18:09:47] total 383792
[2025-06-03 18:09:47] -rw-r--r--. 2 boincer umatlas 216353873 Jun  3 17:17 ATLAS.root_0
[2025-06-03 18:09:47] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 17:17 input.tar.gz
[2025-06-03 18:09:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 17:17 start_atlas.sh
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas 175501210 Jun  3 18:08 HITS.pool.root.1
[2025-06-03 18:09:47] -rw-------. 1 boincer umatlas    614400 Jun  3 18:09 result.tar.gz
18:09:48 (3171318): run_atlas exited; CPU time 18755.354839
18:09:48 (3171318): called boinc_finish(0)

</stderr_txt>
]]>

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